RNA–Protein interactions for RNA: ENST00000517554.1

MTCL1-204, Transcript of microtubule crosslinking factor 1, humanhuman

TSL 1 (best)

Gene MTCL1, Length 1,554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTCL1-204ENST00000517554 CST9LQ9H4G1 147 aa13.36□□□□□ -0.27
MTCL1-204ENST00000517554 PLAC8Q9NZF1 115 aa13.36□□□□□ -0.27
MTCL1-204ENST00000517554 CDKN2A-AS1Q9UH64 79 aa13.36□□□□□ -0.27
MTCL1-204ENST00000517554 SERF1AO75920 110 aa13.35□□□□□ -0.27
MTCL1-204ENST00000517554 DPH3Q96FX2 82 aa13.35□□□□□ -0.27
MTCL1-204ENST00000517554 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.34□□□□□ -0.27
MTCL1-204ENST00000517554 UNQ6190/PRO20217Q6UXQ8 127 aa13.34□□□□□ -0.27
MTCL1-204ENST00000517554 HERVK_113P63121 156 aa13.33□□□□□ -0.28
MTCL1-204ENST00000517554 BAGE3Q86Y29 109 aa13.33□□□□□ -0.28
MTCL1-204ENST00000517554 HBDP02042 147 aa13.32□□□□□ -0.28
MTCL1-204ENST00000517554 PLA2G1BP04054 148 aaKnown RBP13.32□□□□□ -0.28
MTCL1-204ENST00000517554 MRPL35Q9NZE8 188 aaKnown RBP13.32□□□□□ -0.28
MTCL1-204ENST00000517554 LOC107984640A0A0U1RRK4 108 aa13.32□□□□□ -0.28
MTCL1-204ENST00000517554 SEC11AP67812 179 aa13.32□□□□□ -0.28
MTCL1-204ENST00000517554 PMVKQ15126 192 aa13.32□□□□□ -0.28
MTCL1-204ENST00000517554 RNF151Q2KHN1 245 aa13.32□□□□□ -0.28
MTCL1-204ENST00000517554 C2orf82Q6UX34 121 aa13.32□□□□□ -0.28
MTCL1-204ENST00000517554 STPG4Q8N801 248 aa13.32□□□□□ -0.28
MTCL1-204ENST00000517554 C6orf48Q9UBA6 75 aa13.32□□□□□ -0.28
MTCL1-204ENST00000517554 TINCRA0A1B0GVN0 87 aa13.31□□□□□ -0.28
MTCL1-204ENST00000517554 F8WDY8 70 aa13.31□□□□□ -0.28
MTCL1-204ENST00000517554 PTTG1IPP53801 180 aa13.31□□□□□ -0.28
MTCL1-204ENST00000517554 GEMIN7Q9H840 131 aaKnown RBP13.31□□□□□ -0.28
MTCL1-204ENST00000517554 MYCBP2O75592 4640 aa13.31□□□□□ -0.28
MTCL1-204ENST00000517554 NDUFA1O15239 70 aa13.3□□□□□ -0.28
MTCL1-204ENST00000517554 GAGE2BQ13066 116 aa13.3□□□□□ -0.28
MTCL1-204ENST00000517554 IGLV5-45A0A087WSX0 123 aa13.29□□□□□ -0.28
MTCL1-204ENST00000517554 LINC00469Q8N7U9 141 aa13.28□□□□□ -0.28
MTCL1-204ENST00000517554 LINC00474Q9P2X8 69 aa13.28□□□□□ -0.28
MTCL1-204ENST00000517554 PKIGQ9Y2B9 76 aa13.28□□□□□ -0.28
MTCL1-204ENST00000517554 LINC00587B1AMM8 73 aa13.27□□□□□ -0.29
MTCL1-204ENST00000517554 SMIM1B2RUZ4 78 aa13.27□□□□□ -0.29
MTCL1-204ENST00000517554 CHCHD1Q96BP2 118 aaKnown RBP13.27□□□□□ -0.29
MTCL1-204ENST00000517554 RPL37AP61513 92 aaKnown RBP13.26□□□□□ -0.29
MTCL1-204ENST00000517554 RPL18AQ02543 176 aaKnown RBP13.26□□□□□ -0.29
MTCL1-204ENST00000517554 TOMM7Q9P0U1 55 aa13.26□□□□□ -0.29
MTCL1-204ENST00000517554 FLG2Q5D862 2391 aaPredicted RBP13.25□□□□□ -0.29
MTCL1-204ENST00000517554 A0A1W2PNN7 141 aa13.25□□□□□ -0.29
MTCL1-204ENST00000517554 Q6ZRP5 223 aa13.25□□□□□ -0.29
MTCL1-204ENST00000517554 Q8IZM0 81 aa13.25□□□□□ -0.29
MTCL1-204ENST00000517554 TLX1NBP0CAT3 122 aa13.24□□□□□ -0.29
MTCL1-204ENST00000517554 HNRNPA3P51991 378 aaKnown RBP13.24□□□□□ -0.29
MTCL1-204ENST00000517554 IGLC3P0DOY3 106 aa13.24□□□□□ -0.29
MTCL1-204ENST00000517554 C9orf116Q5BN46 136 aaPredicted RBP13.24□□□□□ -0.29
MTCL1-204ENST00000517554 PKHD1L1Q86WI1 4243 aa13.23□□□□□ -0.29
MTCL1-204ENST00000517554 ATP5LO75964 103 aa13.23□□□□□ -0.29
MTCL1-204ENST00000517554 C6orf226Q5I0X4 101 aa13.23□□□□□ -0.29
MTCL1-204ENST00000517554 FAM19A2Q8N3H0 131 aa13.23□□□□□ -0.29
MTCL1-204ENST00000517554 TRBV30A0A0K0K1B3 111 aa13.22□□□□□ -0.29
MTCL1-204ENST00000517554 PRSS2P07478 247 aa13.22□□□□□ -0.29
MTCL1-204ENST00000517554 SPINK8P0C7L1 97 aa13.22□□□□□ -0.29
MTCL1-204ENST00000517554 TSTD3H0UI37 97 aa13.2□□□□□ -0.3
MTCL1-204ENST00000517554 SCGB1D1O95968 90 aa13.2□□□□□ -0.3
MTCL1-204ENST00000517554 ZNF22P17026 224 aaPredicted RBP13.2□□□□□ -0.3
MTCL1-204ENST00000517554 CTAG1AP78358 180 aa13.2□□□□□ -0.3
MTCL1-204ENST00000517554 HSBP1O75506 76 aa13.19□□□□□ -0.3
MTCL1-204ENST00000517554 CKS1BP61024 79 aa13.19□□□□□ -0.3
MTCL1-204ENST00000517554 C11orf86A6NJI1 115 aa13.18□□□□□ -0.3
MTCL1-204ENST00000517554 GAGE2EQ4V326 116 aa13.18□□□□□ -0.3
MTCL1-204ENST00000517554 COX7B2Q8TF08 81 aa13.18□□□□□ -0.3
MTCL1-204ENST00000517554 GAGE2DQ9UEU5 116 aa13.18□□□□□ -0.3
MTCL1-204ENST00000517554 FAM168BA1KXE4 195 aa13.17□□□□□ -0.3
MTCL1-204ENST00000517554 KRTAP7-1Q8IUC3 87 aa13.17□□□□□ -0.3
MTCL1-204ENST00000517554 IFI27L1Q96BM0 104 aa13.17□□□□□ -0.3
MTCL1-204ENST00000517554 LRP1Q07954 4544 aaKnown RBP13.17□□□□□ -0.3
MTCL1-204ENST00000517554 NDUFC2-KCTD14E9PQ53 114 aa13.16□□□□□ -0.3
MTCL1-204ENST00000517554 C7orf33Q8WU49 177 aa13.16□□□□□ -0.3
MTCL1-204ENST00000517554 PRO1933Q9H354 126 aa13.16□□□□□ -0.3
MTCL1-204ENST00000517554 IGLV5-39A0A0G2JS06 123 aa13.15□□□□□ -0.3
MTCL1-204ENST00000517554 F8VRH5 84 aa13.15□□□□□ -0.3
MTCL1-204ENST00000517554 DDTP30046 118 aa13.15□□□□□ -0.3
MTCL1-204ENST00000517554 C9orf129Q5T035 196 aaKnown RBP13.15□□□□□ -0.3
MTCL1-204ENST00000517554 TRAV12-1A0A0B4J245 112 aa13.14□□□□□ -0.31
MTCL1-204ENST00000517554 H3BRM9 83 aa13.14□□□□□ -0.31
MTCL1-204ENST00000517554 CHTOPQ9Y3Y2 248 aaKnown RBP13.14□□□□□ -0.31
MTCL1-204ENST00000517554 FAT3Q8TDW7 4589 aa13.13□□□□□ -0.31
MTCL1-204ENST00000517554 C3orf79P0CE67 100 aa13.13□□□□□ -0.31
MTCL1-204ENST00000517554 CXCL5P42830 114 aa13.13□□□□□ -0.31
MTCL1-204ENST00000517554 KRTDAPP60985 99 aa13.13□□□□□ -0.31
MTCL1-204ENST00000517554 PRR3P79522 188 aaKnown RBP13.12□□□□□ -0.31
MTCL1-204ENST00000517554 PHF5AQ7RTV0 110 aaKnown RBP13.12□□□□□ -0.31
MTCL1-204ENST00000517554 TMEM170BQ5T4T1 132 aa13.1□□□□□ -0.31
MTCL1-204ENST00000517554 LEPROTL1O95214 131 aa13.09□□□□□ -0.31
MTCL1-204ENST00000517554 FAM19A5Q7Z5A7 132 aaPredicted RBP13.09□□□□□ -0.31
MTCL1-204ENST00000517554 KRTAP11-1Q8IUC1 163 aa13.08□□□□□ -0.32
MTCL1-204ENST00000517554 ODF1Q14990 250 aa13.07□□□□□ -0.32
MTCL1-204ENST00000517554 C14orf144Q96I85 54 aa13.07□□□□□ -0.32
MTCL1-204ENST00000517554 XAGE1AQ9HD64 81 aa13.07□□□□□ -0.32
MTCL1-204ENST00000517554 HERC1Q15751 4861 aa13.07□□□□□ -0.32
MTCL1-204ENST00000517554 KRTAP29-1A8MX34 341 aaPredicted RBP13.07□□□□□ -0.32
MTCL1-204ENST00000517554 VAMP8Q9BV40 100 aa13.07□□□□□ -0.32
MTCL1-204ENST00000517554 TMEM223A0PJW6 202 aa13.05□□□□□ -0.32
MTCL1-204ENST00000517554 SERTAD4-AS1Q5TG53 156 aa13.05□□□□□ -0.32
MTCL1-204ENST00000517554 H0Y8G0 127 aa13.04□□□□□ -0.32
MTCL1-204ENST00000517554 PSORS1C2Q9UIG4 136 aa13.04□□□□□ -0.32
MTCL1-204ENST00000517554 DMBT1Q9UGM3 2413 aaPredicted RBP13.04□□□□□ -0.32
MTCL1-204ENST00000517554 M0QXV9 152 aa13.02□□□□□ -0.33
MTCL1-204ENST00000517554 HSPB8Q9UJY1 196 aa13.02□□□□□ -0.33
MTCL1-204ENST00000517554 ZNF625Q96I27 306 aaPredicted RBP13.01□□□□□ -0.33
MTCL1-204ENST00000517554 PAM16Q9Y3D7 125 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms