RNA–Protein interactions for RNA: ENST00000513957.1

NEDD4-210, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-210ENST00000513957 LINC00173Q6ZV60 143 aa5.27□□□□□ -1.57
NEDD4-210ENST00000513957 SCXQ7RTU7 201 aa5.27□□□□□ -1.57
NEDD4-210ENST00000513957 CARD19Q96LW7 228 aa5.27□□□□□ -1.57
NEDD4-210ENST00000513957 SCGB3A1Q96QR1 104 aa5.27□□□□□ -1.57
NEDD4-210ENST00000513957 OPRPNQ99935 248 aaPredicted RBP5.27□□□□□ -1.57
NEDD4-210ENST00000513957 DNAH8Q96JB1 4490 aa5.26□□□□□ -1.57
NEDD4-210ENST00000513957 IGLV4-69A0A075B6H9 119 aa5.26□□□□□ -1.57
NEDD4-210ENST00000513957 HBDP02042 147 aa5.26□□□□□ -1.57
NEDD4-210ENST00000513957 SLPIP03973 132 aa5.26□□□□□ -1.57
NEDD4-210ENST00000513957 SPAG11BQ08648 103 aa5.26□□□□□ -1.57
NEDD4-210ENST00000513957 SYCNQ0VAF6 134 aa5.26□□□□□ -1.57
NEDD4-210ENST00000513957 C5orf38Q86SI9 138 aa5.26□□□□□ -1.57
NEDD4-210ENST00000513957 SLC7A5P1Q8MH63 180 aa5.26□□□□□ -1.57
NEDD4-210ENST00000513957 CHCHD1Q96BP2 118 aaKnown RBP5.26□□□□□ -1.57
NEDD4-210ENST00000513957 KRTAP4-11Q9BYQ6 195 aa5.26□□□□□ -1.57
NEDD4-210ENST00000513957 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.25□□□□□ -1.57
NEDD4-210ENST00000513957 CBLN2Q8IUK8 224 aa5.25□□□□□ -1.57
NEDD4-210ENST00000513957 CIRBP-AS1Q8TBR5 109 aa5.25□□□□□ -1.57
NEDD4-210ENST00000513957 CAMK2N2Q96S95 79 aa5.25□□□□□ -1.57
NEDD4-210ENST00000513957 TINCRA0A1B0GVN0 87 aa5.24□□□□□ -1.57
NEDD4-210ENST00000513957 ATP5LO75964 103 aa5.24□□□□□ -1.57
NEDD4-210ENST00000513957 PMVKQ15126 192 aa5.24□□□□□ -1.57
NEDD4-210ENST00000513957 Q5VSD8 79 aa5.24□□□□□ -1.57
NEDD4-210ENST00000513957 SPACA4Q8TDM5 124 aa5.24□□□□□ -1.57
NEDD4-210ENST00000513957 ORAOV1Q8WV07 137 aa5.24□□□□□ -1.57
NEDD4-210ENST00000513957 KRTAP4-5Q9BYR2 181 aa5.24□□□□□ -1.57
NEDD4-210ENST00000513957 MRPL35Q9NZE8 188 aaKnown RBP5.24□□□□□ -1.57
NEDD4-210ENST00000513957 IGLV5-45A0A087WSX0 123 aa5.23□□□□□ -1.57
NEDD4-210ENST00000513957 LOC107984640A0A0U1RRK4 108 aa5.23□□□□□ -1.57
NEDD4-210ENST00000513957 NDUFA1O15239 70 aa5.23□□□□□ -1.57
NEDD4-210ENST00000513957 CXCL5P42830 114 aa5.23□□□□□ -1.57
NEDD4-210ENST00000513957 COX6A2Q02221 97 aa5.23□□□□□ -1.57
NEDD4-210ENST00000513957 MPLKIPQ8TAP9 179 aa5.23□□□□□ -1.57
NEDD4-210ENST00000513957 URB1-AS1Q96HZ7 61 aa5.23□□□□□ -1.57
NEDD4-210ENST00000513957 PACRGQ96M98 296 aaPredicted RBP5.23□□□□□ -1.57
NEDD4-210ENST00000513957 A0A096LNJ9 63 aa5.22□□□□□ -1.57
NEDD4-210ENST00000513957 TRBV30A0A0K0K1B3 111 aa5.22□□□□□ -1.57
NEDD4-210ENST00000513957 S100A6P06703 90 aa5.22□□□□□ -1.57
NEDD4-210ENST00000513957 TLX1NBP0CAT3 122 aa5.22□□□□□ -1.57
NEDD4-210ENST00000513957 PDZD11Q5EBL8 140 aa5.22□□□□□ -1.57
NEDD4-210ENST00000513957 Q6ZRU5 148 aa5.22□□□□□ -1.57
NEDD4-210ENST00000513957 Q8IZM0 81 aa5.22□□□□□ -1.57
NEDD4-210ENST00000513957 LINC00518Q8N0U6 118 aa5.22□□□□□ -1.57
NEDD4-210ENST00000513957 CST9LQ9H4G1 147 aa5.22□□□□□ -1.57
NEDD4-210ENST00000513957 PLAC8Q9NZF1 115 aa5.22□□□□□ -1.57
NEDD4-210ENST00000513957 COLCA2A8K830 154 aa5.21□□□□□ -1.58
NEDD4-210ENST00000513957 H3BRM9 83 aa5.21□□□□□ -1.58
NEDD4-210ENST00000513957 SMR3BP02814 79 aaPredicted RBP5.21□□□□□ -1.58
NEDD4-210ENST00000513957 TRGC2P03986 189 aa5.21□□□□□ -1.58
NEDD4-210ENST00000513957 PRSS2P07478 247 aa5.21□□□□□ -1.58
NEDD4-210ENST00000513957 KIAA0087Q14695 138 aa5.21□□□□□ -1.58
NEDD4-210ENST00000513957 FAT1Q14517 4588 aa5.2□□□□□ -1.58
NEDD4-210ENST00000513957 A0A087WYN8 130 aa5.2□□□□□ -1.58
NEDD4-210ENST00000513957 A0A096LNI7 61 aa5.2□□□□□ -1.58
NEDD4-210ENST00000513957 HSBP1O75506 76 aa5.2□□□□□ -1.58
NEDD4-210ENST00000513957 IGLC3P0DOY3 106 aa5.2□□□□□ -1.58
NEDD4-210ENST00000513957 CKS1BP61024 79 aa5.2□□□□□ -1.58
NEDD4-210ENST00000513957 HAMPP81172 84 aa5.2□□□□□ -1.58
NEDD4-210ENST00000513957 ZC2HC1BQ5TFG8 222 aa5.2□□□□□ -1.58
NEDD4-210ENST00000513957 BAGE3Q86Y29 109 aa5.2□□□□□ -1.58
NEDD4-210ENST00000513957 LINC00469Q8N7U9 141 aa5.2□□□□□ -1.58
NEDD4-210ENST00000513957 LINC00526Q96FQ7 95 aa5.2□□□□□ -1.58
NEDD4-210ENST00000513957 CDKN2A-AS1Q9UH64 79 aa5.2□□□□□ -1.58
NEDD4-210ENST00000513957 TRAV12-1A0A0B4J245 112 aa5.19□□□□□ -1.58
NEDD4-210ENST00000513957 IGKV2-24A0A0C4DH68 120 aa5.19□□□□□ -1.58
NEDD4-210ENST00000513957 A0A0J9YXV3 536 aa5.19□□□□□ -1.58
NEDD4-210ENST00000513957 SMIM1B2RUZ4 78 aa5.19□□□□□ -1.58
NEDD4-210ENST00000513957 PANO1I0J062 215 aa5.19□□□□□ -1.58
NEDD4-210ENST00000513957 CHTF8P0CG12 524 aa5.19□□□□□ -1.58
NEDD4-210ENST00000513957 KRTAP5-3Q6L8H2 238 aa5.19□□□□□ -1.58
NEDD4-210ENST00000513957 SFTA2Q6UW10 78 aa5.19□□□□□ -1.58
NEDD4-210ENST00000513957 C7orf33Q8WU49 177 aa5.19□□□□□ -1.58
NEDD4-210ENST00000513957 DPH3Q96FX2 82 aa5.19□□□□□ -1.58
NEDD4-210ENST00000513957 NDUFC2-KCTD14E9PQ53 114 aa5.18□□□□□ -1.58
NEDD4-210ENST00000513957 F8VRH5 84 aa5.18□□□□□ -1.58
NEDD4-210ENST00000513957 RPL18AQ02543 176 aaKnown RBP5.18□□□□□ -1.58
NEDD4-210ENST00000513957 PMCHL1Q16048 86 aa5.18□□□□□ -1.58
NEDD4-210ENST00000513957 STPG4Q8N801 248 aa5.18□□□□□ -1.58
NEDD4-210ENST00000513957 IFI27L1Q96BM0 104 aa5.18□□□□□ -1.58
NEDD4-210ENST00000513957 INAFM2P0DMQ5 153 aa5.17□□□□□ -1.58
NEDD4-210ENST00000513957 RPL37AP61513 92 aaKnown RBP5.17□□□□□ -1.58
NEDD4-210ENST00000513957 UNQ6190/PRO20217Q6UXQ8 127 aa5.17□□□□□ -1.58
NEDD4-210ENST00000513957 TOMM7Q9P0U1 55 aa5.17□□□□□ -1.58
NEDD4-210ENST00000513957 C6orf48Q9UBA6 75 aa5.17□□□□□ -1.58
NEDD4-210ENST00000513957 HSPB8Q9UJY1 196 aa5.17□□□□□ -1.58
NEDD4-210ENST00000513957 PCLOQ9Y6V0 5065 aa5.16□□□□□ -1.58
NEDD4-210ENST00000513957 SERF1AO75920 110 aa5.16□□□□□ -1.58
NEDD4-210ENST00000513957 LEPROTL1O95214 131 aa5.16□□□□□ -1.58
NEDD4-210ENST00000513957 S100A1P23297 94 aa5.16□□□□□ -1.58
NEDD4-210ENST00000513957 RPL13AP40429 203 aaKnown RBP5.16□□□□□ -1.58
NEDD4-210ENST00000513957 NDUFA6P56556 154 aa5.16□□□□□ -1.58
NEDD4-210ENST00000513957 COX7B2Q8TF08 81 aa5.16□□□□□ -1.58
NEDD4-210ENST00000513957 IGLV5-39A0A0G2JS06 123 aa5.15□□□□□ -1.59
NEDD4-210ENST00000513957 ZNF22P17026 224 aaPredicted RBP5.15□□□□□ -1.59
NEDD4-210ENST00000513957 KRTAP10-4P60372 401 aaPredicted RBP5.15□□□□□ -1.59
NEDD4-210ENST00000513957 SRSF9Q13242 221 aaKnown RBP eCLIP5.15□□□□□ -1.59
NEDD4-210ENST00000513957 C10orf25Q5T742 122 aa5.15□□□□□ -1.59
NEDD4-210ENST00000513957 Q6ZRP5 223 aa5.15□□□□□ -1.59
NEDD4-210ENST00000513957 VPS13BQ7Z7G8 4022 aa5.15□□□□□ -1.59
NEDD4-210ENST00000513957 SPINK8P0C7L1 97 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms