RNA–Protein interactions for RNA: ENST00000513266.5

PTPN20-228, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 818 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-228ENST00000513266 PRSS2P07478 247 aa4.91□□□□□ -1.62
PTPN20-228ENST00000513266 KRTAP2-3P0C7H8 128 aa4.91□□□□□ -1.62
PTPN20-228ENST00000513266 C6orf226Q5I0X4 101 aa4.91□□□□□ -1.62
PTPN20-228ENST00000513266 LINC01561Q8N1V8 128 aa4.91□□□□□ -1.62
PTPN20-228ENST00000513266 TMEM18Q96B42 140 aa4.91□□□□□ -1.62
PTPN20-228ENST00000513266 KRTAP2-4Q9BYR9 128 aa4.91□□□□□ -1.62
PTPN20-228ENST00000513266 GEMIN7Q9H840 131 aaKnown RBP4.91□□□□□ -1.62
PTPN20-228ENST00000513266 ZNF706Q9Y5V0 76 aaPredicted RBP4.91□□□□□ -1.62
PTPN20-228ENST00000513266 IGLV6-57P01721 117 aa4.9□□□□□ -1.63
PTPN20-228ENST00000513266 Q8IZM0 81 aa4.9□□□□□ -1.63
PTPN20-228ENST00000513266 NUDT10Q8NFP7 164 aa4.9□□□□□ -1.63
PTPN20-228ENST00000513266 NUDT11Q96G61 164 aa4.9□□□□□ -1.63
PTPN20-228ENST00000513266 SPANXA1Q9NS26 97 aa4.9□□□□□ -1.63
PTPN20-228ENST00000513266 F8VRH5 84 aa4.89□□□□□ -1.63
PTPN20-228ENST00000513266 SMKR1H3BMG3 65 aa4.89□□□□□ -1.63
PTPN20-228ENST00000513266 SSBP3-AS1Q7Z2R9 100 aa4.89□□□□□ -1.63
PTPN20-228ENST00000513266 C11orf52Q96A22 123 aa4.89□□□□□ -1.63
PTPN20-228ENST00000513266 KRTAP4-7Q9BYR0 210 aa4.89□□□□□ -1.63
PTPN20-228ENST00000513266 TRBV20OR9-2A0A075B6H5 130 aa4.88□□□□□ -1.63
PTPN20-228ENST00000513266 IGLV9-49A0A0B4J1Y8 123 aa4.88□□□□□ -1.63
PTPN20-228ENST00000513266 A0A1B0GV50 99 aa4.88□□□□□ -1.63
PTPN20-228ENST00000513266 RAB4AP20338 218 aa4.88□□□□□ -1.63
PTPN20-228ENST00000513266 SUMO2P61956 95 aaKnown RBP4.88□□□□□ -1.63
PTPN20-228ENST00000513266 LINC00483Q53H64 154 aa4.88□□□□□ -1.63
PTPN20-228ENST00000513266 LINC01551Q86U37 167 aa4.88□□□□□ -1.63
PTPN20-228ENST00000513266 NRACQ8N912 160 aa4.88□□□□□ -1.63
PTPN20-228ENST00000513266 ALKBH7Q9BT30 221 aaPredicted RBP4.88□□□□□ -1.63
PTPN20-228ENST00000513266 KMT2DO14686 5537 aa4.88□□□□□ -1.63
PTPN20-228ENST00000513266 GNG4P50150 75 aa4.87□□□□□ -1.63
PTPN20-228ENST00000513266 Q6ZN92 141 aa4.87□□□□□ -1.63
PTPN20-228ENST00000513266 SMIM12Q96EX1 92 aa4.87□□□□□ -1.63
PTPN20-228ENST00000513266 CCL20P78556 96 aa4.86□□□□□ -1.63
PTPN20-228ENST00000513266 SVIPQ8NHG7 77 aa4.86□□□□□ -1.63
PTPN20-228ENST00000513266 BORCS7-ASMTA0A0B4J1R7 106 aa4.85□□□□□ -1.63
PTPN20-228ENST00000513266 SSNA1O43805 119 aa4.85□□□□□ -1.63
PTPN20-228ENST00000513266 VPREB1P12018 145 aa4.85□□□□□ -1.63
PTPN20-228ENST00000513266 LGALS3P17931 250 aaKnown RBP4.85□□□□□ -1.63
PTPN20-228ENST00000513266 AMN1Q8IY45 258 aa4.85□□□□□ -1.63
PTPN20-228ENST00000513266 KCNRGQ8N5I3 272 aa4.85□□□□□ -1.63
PTPN20-228ENST00000513266 SFT2D1Q8WV19 159 aa4.85□□□□□ -1.63
PTPN20-228ENST00000513266 TMEM191AQ9H0A3 160 aa4.85□□□□□ -1.63
PTPN20-228ENST00000513266 SMCR5Q8TEV8 140 aa4.84□□□□□ -1.63
PTPN20-228ENST00000513266 MBD3L1Q8WWY6 194 aa4.84□□□□□ -1.63
PTPN20-228ENST00000513266 BATF3Q9NR55 127 aa4.84□□□□□ -1.63
PTPN20-228ENST00000513266 IGLV4-3A0A075B6K6 122 aa4.83□□□□□ -1.64
PTPN20-228ENST00000513266 H3BS24 57 aa4.83□□□□□ -1.64
PTPN20-228ENST00000513266 GAGE2AQ6NT46 116 aa4.83□□□□□ -1.64
PTPN20-228ENST00000513266 FAM231DQ6ZW35 169 aa4.83□□□□□ -1.64
PTPN20-228ENST00000513266 BIN3Q9NQY0 253 aa4.83□□□□□ -1.64
PTPN20-228ENST00000513266 NPSP0C0P6 89 aa4.82□□□□□ -1.64
PTPN20-228ENST00000513266 RAB5BP61020 215 aa4.82□□□□□ -1.64
PTPN20-228ENST00000513266 ZC2HC1BQ5TFG8 222 aa4.82□□□□□ -1.64
PTPN20-228ENST00000513266 Q8NDZ9 215 aa4.82□□□□□ -1.64
PTPN20-228ENST00000513266 NDUFA13Q9P0J0 144 aa4.82□□□□□ -1.64
PTPN20-228ENST00000513266 PPP1R2P9O14990 202 aa4.81□□□□□ -1.64
PTPN20-228ENST00000513266 PPP1R17O96001 155 aa4.81□□□□□ -1.64
PTPN20-228ENST00000513266 CXCL5P42830 114 aa4.81□□□□□ -1.64
PTPN20-228ENST00000513266 Q5BKY6 102 aa4.81□□□□□ -1.64
PTPN20-228ENST00000513266 LCE4AQ5TA78 99 aa4.81□□□□□ -1.64
PTPN20-228ENST00000513266 ENKURQ8TC29 256 aa4.81□□□□□ -1.64
PTPN20-228ENST00000513266 TIMM17AQ99595 171 aa4.81□□□□□ -1.64
PTPN20-228ENST00000513266 MDN1Q9NU22 5596 aa4.8□□□□□ -1.64
PTPN20-228ENST00000513266 C20orf202A1L168 122 aa4.8□□□□□ -1.64
PTPN20-228ENST00000513266 K7EN84 100 aa4.8□□□□□ -1.64
PTPN20-228ENST00000513266 KRTAP5-9P26371 169 aa4.8□□□□□ -1.64
PTPN20-228ENST00000513266 IFI27P40305 119 aaPredicted RBP4.8□□□□□ -1.64
PTPN20-228ENST00000513266 FAM213BQ8TBF2 198 aa4.8□□□□□ -1.64
PTPN20-228ENST00000513266 TMEM141Q96I45 108 aa4.8□□□□□ -1.64
PTPN20-228ENST00000513266 CHTOPQ9Y3Y2 248 aaKnown RBP4.8□□□□□ -1.64
PTPN20-228ENST00000513266 TCAPO15273 167 aa4.79□□□□□ -1.64
PTPN20-228ENST00000513266 AKAP14Q86UN6 197 aa4.79□□□□□ -1.64
PTPN20-228ENST00000513266 KRTAP4-9Q9BYQ8 210 aa4.79□□□□□ -1.64
PTPN20-228ENST00000513266 EIF5A2Q9GZV4 153 aaKnown RBP4.79□□□□□ -1.64
PTPN20-228ENST00000513266 MED9Q9NWA0 146 aa4.79□□□□□ -1.64
PTPN20-228ENST00000513266 CDKN2A-AS1Q9UH64 79 aa4.79□□□□□ -1.64
PTPN20-228ENST00000513266 PYGO1Q9Y3Y4 419 aa4.79□□□□□ -1.64
PTPN20-228ENST00000513266 A0A1B0GUT8 65 aa4.78□□□□□ -1.64
PTPN20-228ENST00000513266 TEX43Q6ZNM6 134 aa4.78□□□□□ -1.64
PTPN20-228ENST00000513266 FAM19A3Q7Z5A8 133 aa4.78□□□□□ -1.64
PTPN20-228ENST00000513266 C20orf78Q9BR46 151 aa4.78□□□□□ -1.64
PTPN20-228ENST00000513266 A8MWL6 223 aa4.77□□□□□ -1.65
PTPN20-228ENST00000513266 GIPP09681 153 aaPredicted RBP4.77□□□□□ -1.65
PTPN20-228ENST00000513266 KIAA1644Q3SXP7 199 aa4.77□□□□□ -1.65
PTPN20-228ENST00000513266 OCC1Q8TAD7 63 aa4.77□□□□□ -1.65
PTPN20-228ENST00000513266 LIMD2Q9BT23 127 aa4.77□□□□□ -1.65
PTPN20-228ENST00000513266 SMIM2Q9BVW6 85 aa4.77□□□□□ -1.65
PTPN20-228ENST00000513266 MANBALQ9NQG1 85 aa4.77□□□□□ -1.65
PTPN20-228ENST00000513266 GNG13Q9P2W3 67 aa4.77□□□□□ -1.65
PTPN20-228ENST00000513266 TRBV24-1A0A075B6N3 115 aa4.76□□□□□ -1.65
PTPN20-228ENST00000513266 ERC2-IT1O76042 136 aa4.76□□□□□ -1.65
PTPN20-228ENST00000513266 MRPL51Q4U2R6 128 aaKnown RBP4.76□□□□□ -1.65
PTPN20-228ENST00000513266 CT83Q5H943 113 aa4.76□□□□□ -1.65
PTPN20-228ENST00000513266 C9orf153Q5TBE3 101 aa4.76□□□□□ -1.65
PTPN20-228ENST00000513266 BORCS7Q96B45 105 aa4.76□□□□□ -1.65
PTPN20-228ENST00000513266 C2orf88Q9BSF0 95 aa4.76□□□□□ -1.65
PTPN20-228ENST00000513266 SND1-IT1Q9HBX3 110 aa4.76□□□□□ -1.65
PTPN20-228ENST00000513266 GATCO43716 136 aaKnown RBP4.75□□□□□ -1.65
PTPN20-228ENST00000513266 RAB14P61106 215 aa4.75□□□□□ -1.65
PTPN20-228ENST00000513266 RPL24P83731 157 aaKnown RBP4.75□□□□□ -1.65
PTPN20-228ENST00000513266 AMELXQ99217 191 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms