RNA–Protein interactions for RNA: ENST00000512380.1

PDLIM3-208, Transcript of PDZ and LIM domain 3, humanhuman

TSL 2

Gene PDLIM3, Length 764 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-208ENST00000512380 SLC35B3Q9H1N7 401 aa3.85□□□□□ -1.79
PDLIM3-208ENST00000512380 TRRAPQ9Y4A5 3859 aa3.84□□□□□ -1.79
PDLIM3-208ENST00000512380 TRAV12-2A0A075B6T6 113 aa3.84□□□□□ -1.79
PDLIM3-208ENST00000512380 M0R2Z0 102 aa3.84□□□□□ -1.79
PDLIM3-208ENST00000512380 HRES1P13985 223 aa3.84□□□□□ -1.79
PDLIM3-208ENST00000512380 SH2D6Q7Z4S9 175 aa3.84□□□□□ -1.79
PDLIM3-208ENST00000512380 NAT8BQ9UHF3 227 aa3.84□□□□□ -1.79
PDLIM3-208ENST00000512380 EPDR1Q9UM22 224 aa3.84□□□□□ -1.79
PDLIM3-208ENST00000512380 PKD1L1Q8TDX9 2849 aa3.84□□□□□ -1.8
PDLIM3-208ENST00000512380 MGAM2Q2M2H8 2515 aa3.83□□□□□ -1.8
PDLIM3-208ENST00000512380 VWFP04275 2813 aa3.83□□□□□ -1.8
PDLIM3-208ENST00000512380 IGKV2-40A0A087WW87 121 aaPredicted RBP3.83□□□□□ -1.8
PDLIM3-208ENST00000512380 TRAV12-3A0A0B4J271 114 aa3.83□□□□□ -1.8
PDLIM3-208ENST00000512380 RBAKDNA6NC62 111 aa3.83□□□□□ -1.8
PDLIM3-208ENST00000512380 H7C2G1 150 aa3.83□□□□□ -1.8
PDLIM3-208ENST00000512380 IGKV2D-40P01614 121 aaPredicted RBP3.83□□□□□ -1.8
PDLIM3-208ENST00000512380 KRTAP5-9P26371 169 aa3.83□□□□□ -1.8
PDLIM3-208ENST00000512380 LYZL1Q6UWQ5 148 aa3.83□□□□□ -1.8
PDLIM3-208ENST00000512380 ALKAL2Q6UX46 152 aa3.83□□□□□ -1.8
PDLIM3-208ENST00000512380 C5orf17Q8NAS9 161 aa3.83□□□□□ -1.8
PDLIM3-208ENST00000512380 Q8NDZ9 215 aa3.83□□□□□ -1.8
PDLIM3-208ENST00000512380 GNG13Q9P2W3 67 aa3.83□□□□□ -1.8
PDLIM3-208ENST00000512380 TRAV1-1A0A0B4J248 108 aa3.82□□□□□ -1.8
PDLIM3-208ENST00000512380 C3orf84H3BNL1 204 aa3.82□□□□□ -1.8
PDLIM3-208ENST00000512380 DEFB4AO15263 64 aa3.82□□□□□ -1.8
PDLIM3-208ENST00000512380 NMBP08949 121 aa3.82□□□□□ -1.8
PDLIM3-208ENST00000512380 MIFP14174 115 aa3.82□□□□□ -1.8
PDLIM3-208ENST00000512380 LINC00315P59091 139 aa3.82□□□□□ -1.8
PDLIM3-208ENST00000512380 HHLA3Q9XRX5 114 aa3.82□□□□□ -1.8
PDLIM3-208ENST00000512380 C7orf71A4D174 169 aa3.81□□□□□ -1.8
PDLIM3-208ENST00000512380 LRCOL1A6NCL2 159 aa3.81□□□□□ -1.8
PDLIM3-208ENST00000512380 A8MTW9 85 aa3.81□□□□□ -1.8
PDLIM3-208ENST00000512380 C9JAW5 83 aa3.81□□□□□ -1.8
PDLIM3-208ENST00000512380 TCRAP04437 139 aa3.81□□□□□ -1.8
PDLIM3-208ENST00000512380 SPART-AS1P0CW21 52 aa3.81□□□□□ -1.8
PDLIM3-208ENST00000512380 FABP2P12104 132 aa3.81□□□□□ -1.8
PDLIM3-208ENST00000512380 UBE2G1P62253 170 aa3.81□□□□□ -1.8
PDLIM3-208ENST00000512380 TEX261Q6UWH6 196 aa3.81□□□□□ -1.8
PDLIM3-208ENST00000512380 ODF3Q96PU9 254 aa3.81□□□□□ -1.8
PDLIM3-208ENST00000512380 PRADC1Q9BSG0 188 aa3.81□□□□□ -1.8
PDLIM3-208ENST00000512380 MANBALQ9NQG1 85 aa3.81□□□□□ -1.8
PDLIM3-208ENST00000512380 MED9Q9NWA0 146 aa3.81□□□□□ -1.8
PDLIM3-208ENST00000512380 LENEPQ9Y5L5 61 aa3.81□□□□□ -1.8
PDLIM3-208ENST00000512380 TCL1BO95988 128 aa3.8□□□□□ -1.8
PDLIM3-208ENST00000512380 AZU1P20160 251 aa3.8□□□□□ -1.8
PDLIM3-208ENST00000512380 SOSTDC1Q6X4U4 206 aa3.8□□□□□ -1.8
PDLIM3-208ENST00000512380 BAGE2Q86Y30 109 aa3.8□□□□□ -1.8
PDLIM3-208ENST00000512380 Q8TAT8 98 aa3.8□□□□□ -1.8
PDLIM3-208ENST00000512380 TXNDC17Q9BRA2 123 aa3.8□□□□□ -1.8
PDLIM3-208ENST00000512380 VPS25Q9BRG1 176 aa3.8□□□□□ -1.8
PDLIM3-208ENST00000512380 ZFP30Q9Y2G7 519 aa3.8□□□□□ -1.8
PDLIM3-208ENST00000512380 NBEAL1Q6ZS30 2694 aa3.79□□□□□ -1.8
PDLIM3-208ENST00000512380 TRAV21A0A0B4J279 112 aa3.79□□□□□ -1.8
PDLIM3-208ENST00000512380 TRBV10-2A0A0K0K1G8 114 aa3.79□□□□□ -1.8
PDLIM3-208ENST00000512380 K7ERJ3 54 aa3.79□□□□□ -1.8
PDLIM3-208ENST00000512380 CRYGAP11844 174 aa3.79□□□□□ -1.8
PDLIM3-208ENST00000512380 NDUFA6P56556 154 aa3.79□□□□□ -1.8
PDLIM3-208ENST00000512380 TVP23CQ96ET8 276 aa3.79□□□□□ -1.8
PDLIM3-208ENST00000512380 TCEAL7Q9BRU2 100 aa3.79□□□□□ -1.8
PDLIM3-208ENST00000512380 TIMM8BQ9Y5J9 83 aaPredicted RBP3.79□□□□□ -1.8
PDLIM3-208ENST00000512380 ARL2-SNX15V9GYD0 113 aa3.79□□□□□ -1.8
PDLIM3-208ENST00000512380 ANK2Q01484 3957 aa3.79□□□□□ -1.8
PDLIM3-208ENST00000512380 DNHD1Q96M86 4753 aa3.79□□□□□ -1.8
PDLIM3-208ENST00000512380 NOTCH1P46531 2555 aa3.78□□□□□ -1.8
PDLIM3-208ENST00000512380 J3QQQ9 107 aa3.78□□□□□ -1.8
PDLIM3-208ENST00000512380 DEFB130BP0DP73 79 aa3.78□□□□□ -1.8
PDLIM3-208ENST00000512380 DEFB130AP0DP74 79 aa3.78□□□□□ -1.8
PDLIM3-208ENST00000512380 HBBP68871 147 aa3.78□□□□□ -1.8
PDLIM3-208ENST00000512380 PEA15Q15121 130 aa3.78□□□□□ -1.8
PDLIM3-208ENST00000512380 LINC00167Q96N53 147 aa3.78□□□□□ -1.8
PDLIM3-208ENST00000512380 NOP10Q9NPE3 64 aaKnown RBP3.78□□□□□ -1.8
PDLIM3-208ENST00000512380 FBN3Q75N90 2809 aa3.78□□□□□ -1.8
PDLIM3-208ENST00000512380 TRBV6-1A0A0K0K1D8 114 aa3.77□□□□□ -1.81
PDLIM3-208ENST00000512380 RTL8CO15255 209 aa3.77□□□□□ -1.81
PDLIM3-208ENST00000512380 DPM2O94777 84 aa3.77□□□□□ -1.81
PDLIM3-208ENST00000512380 MGST1P10620 155 aaKnown RBP3.77□□□□□ -1.81
PDLIM3-208ENST00000512380 HTN3P15516 51 aa3.77□□□□□ -1.81
PDLIM3-208ENST00000512380 RPL35P42766 123 aaKnown RBP3.77□□□□□ -1.81
PDLIM3-208ENST00000512380 GNG4P50150 75 aa3.77□□□□□ -1.81
PDLIM3-208ENST00000512380 FXYD2P54710 66 aa3.77□□□□□ -1.81
PDLIM3-208ENST00000512380 Q6AWC8 147 aa3.77□□□□□ -1.81
PDLIM3-208ENST00000512380 TMEM263Q8WUH6 116 aaKnown RBP3.77□□□□□ -1.81
PDLIM3-208ENST00000512380 LINC00467Q9BRT7 94 aa3.77□□□□□ -1.81
PDLIM3-208ENST00000512380 TRGV2A0A075B6R0 118 aa3.76□□□□□ -1.81
PDLIM3-208ENST00000512380 DEFB131BA0A096LNP1 70 aa3.76□□□□□ -1.81
PDLIM3-208ENST00000512380 TRGV1A0A0A0MS02 117 aa3.76□□□□□ -1.81
PDLIM3-208ENST00000512380 TRAV10A0A0B4J240 114 aa3.76□□□□□ -1.81
PDLIM3-208ENST00000512380 LOC107984640A0A0U1RRK4 108 aa3.76□□□□□ -1.81
PDLIM3-208ENST00000512380 A0A1W2PNM2 257 aa3.76□□□□□ -1.81
PDLIM3-208ENST00000512380 CRIP1P50238 77 aa3.76□□□□□ -1.81
PDLIM3-208ENST00000512380 PRR9Q5T870 116 aa3.76□□□□□ -1.81
PDLIM3-208ENST00000512380 CMYA5Q8N3K9 4069 aa3.76□□□□□ -1.81
PDLIM3-208ENST00000512380 TMSB15BA0A087X1C1 80 aa3.75□□□□□ -1.81
PDLIM3-208ENST00000512380 IGHV1-58A0A0C4DH39 117 aa3.75□□□□□ -1.81
PDLIM3-208ENST00000512380 NUPR2A6NF83 97 aa3.75□□□□□ -1.81
PDLIM3-208ENST00000512380 ZNF727A8MUV8 499 aa3.75□□□□□ -1.81
PDLIM3-208ENST00000512380 M0R2P5 195 aa3.75□□□□□ -1.81
PDLIM3-208ENST00000512380 HIST1H2BKO60814 126 aa3.75□□□□□ -1.81
PDLIM3-208ENST00000512380 HIST1H2BJP06899 126 aa3.75□□□□□ -1.81
PDLIM3-208ENST00000512380 Q86TA4 180 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms