RNA–Protein interactions for RNA: ENST00000512340.5

NR1I3-231, Transcript of nuclear receptor subfamily 1 group I member 3, human

TSL 1 (best)

Gene NR1I3, Length 891 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1I3-231	ENST00000512340		Q8N8P6	123 aa		4.99	□□□□□ -1.61
NR1I3-231	ENST00000512340	C20orf203	Q8NBC4	194 aa		4.99	□□□□□ -1.61
NR1I3-231	ENST00000512340	PRSS3P2	Q8NHM4	247 aa		4.99	□□□□□ -1.61
NR1I3-231	ENST00000512340	DEFB104A	Q8WTQ1	72 aa		4.99	□□□□□ -1.61
NR1I3-231	ENST00000512340	AP5S1	Q9NUS5	200 aa		4.99	□□□□□ -1.61
NR1I3-231	ENST00000512340	VPS13D	Q5THJ4	4388 aa		4.99	□□□□□ -1.61
NR1I3-231	ENST00000512340	DNAH10	Q8IVF4	4471 aa		4.99	□□□□□ -1.61
NR1I3-231	ENST00000512340	DNAH6	Q9C0G6	4158 aa		4.99	□□□□□ -1.61
NR1I3-231	ENST00000512340	IGLV5-52	A0A0A0MRZ9	124 aa		4.98	□□□□□ -1.61
NR1I3-231	ENST00000512340	IGKV3OR2-268	A0A0C4DH90	116 aa		4.98	□□□□□ -1.61
NR1I3-231	ENST00000512340	LOC389332	A0A1B0GUA5	103 aa		4.98	□□□□□ -1.61
NR1I3-231	ENST00000512340		A0A1B0GVY2	172 aa		4.98	□□□□□ -1.61
NR1I3-231	ENST00000512340	ATP5L	O75964	103 aa		4.98	□□□□□ -1.61
NR1I3-231	ENST00000512340	C1orf195	Q5TG92	126 aa		4.98	□□□□□ -1.61
NR1I3-231	ENST00000512340	CLPSL2	Q6UWE3	100 aa		4.98	□□□□□ -1.61
NR1I3-231	ENST00000512340	ATOH7	Q8N100	152 aa		4.98	□□□□□ -1.61
NR1I3-231	ENST00000512340		Q8N3U1	123 aa		4.98	□□□□□ -1.61
NR1I3-231	ENST00000512340		Q8N814	137 aa		4.98	□□□□□ -1.61
NR1I3-231	ENST00000512340	PKIG	Q9Y2B9	76 aa		4.98	□□□□□ -1.61
NR1I3-231	ENST00000512340	IGLV4-60	A0A075B6I1	120 aa		4.97	□□□□□ -1.61
NR1I3-231	ENST00000512340	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	4.97	□□□□□ -1.61
NR1I3-231	ENST00000512340	SNCG	O76070	127 aa		4.97	□□□□□ -1.61
NR1I3-231	ENST00000512340	GAS8-AS1	O95177	125 aa		4.97	□□□□□ -1.61
NR1I3-231	ENST00000512340	APOM	O95445	188 aa		4.97	□□□□□ -1.61
NR1I3-231	ENST00000512340	SMIM13	P0DJ93	91 aa		4.97	□□□□□ -1.61
NR1I3-231	ENST00000512340	COX8A	P10176	69 aa		4.97	□□□□□ -1.61
NR1I3-231	ENST00000512340	C4orf26	Q17RF5	130 aa		4.97	□□□□□ -1.61
NR1I3-231	ENST00000512340	PPDPFL	Q8WWR9	84 aa		4.97	□□□□□ -1.61
NR1I3-231	ENST00000512340	MRPL18	Q9H0U6	180 aa	Known RBP	4.97	□□□□□ -1.61
NR1I3-231	ENST00000512340	CDC42SE2	Q9NRR3	84 aa		4.97	□□□□□ -1.61
NR1I3-231	ENST00000512340	IGLV10-54	A0A075B6I4	117 aa		4.96	□□□□□ -1.62
NR1I3-231	ENST00000512340	LOC107984640	A0A0U1RRK4	108 aa		4.96	□□□□□ -1.62
NR1I3-231	ENST00000512340	LRCOL1	A6NCL2	159 aa		4.96	□□□□□ -1.62
NR1I3-231	ENST00000512340	WFDC2	Q14508	124 aa		4.96	□□□□□ -1.62
NR1I3-231	ENST00000512340	ETDB	Q3ZM63	59 aa		4.96	□□□□□ -1.62
NR1I3-231	ENST00000512340	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	4.96	□□□□□ -1.62
NR1I3-231	ENST00000512340	PLEKHB2	Q96CS7	222 aa		4.96	□□□□□ -1.62
NR1I3-231	ENST00000512340	PYGO1	Q9Y3Y4	419 aa		4.96	□□□□□ -1.62
NR1I3-231	ENST00000512340	PKHD1	P08F94	4074 aa		4.96	□□□□□ -1.62
NR1I3-231	ENST00000512340	LINC00959	A0A1B0GUT2	108 aa		4.95	□□□□□ -1.62
NR1I3-231	ENST00000512340	USP17L23	D6RBM5	183 aa		4.95	□□□□□ -1.62
NR1I3-231	ENST00000512340	LECT2	O14960	151 aa		4.95	□□□□□ -1.62
NR1I3-231	ENST00000512340	MRPS36	P82909	103 aa	Known RBP	4.95	□□□□□ -1.62
NR1I3-231	ENST00000512340	C2orf66	Q6UXQ4	117 aa		4.95	□□□□□ -1.62
NR1I3-231	ENST00000512340	TMEM141	Q96I45	108 aa		4.95	□□□□□ -1.62
NR1I3-231	ENST00000512340	PRO0461	Q9UI25	63 aa		4.95	□□□□□ -1.62
NR1I3-231	ENST00000512340	UBE2D4	Q9Y2X8	147 aa		4.95	□□□□□ -1.62
NR1I3-231	ENST00000512340	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	4.94	□□□□□ -1.62
NR1I3-231	ENST00000512340	TRAV13-1	A0A0B4J241	112 aa		4.94	□□□□□ -1.62
NR1I3-231	ENST00000512340	IGHV1-58	A0A0C4DH39	117 aa		4.94	□□□□□ -1.62
NR1I3-231	ENST00000512340	hDV102S1	A0JD36	115 aa		4.94	□□□□□ -1.62
NR1I3-231	ENST00000512340		E9PLD3	99 aa		4.94	□□□□□ -1.62
NR1I3-231	ENST00000512340	COX7A2L	O14548	114 aa		4.94	□□□□□ -1.62
NR1I3-231	ENST00000512340	UQCRQ	O14949	82 aa		4.94	□□□□□ -1.62
NR1I3-231	ENST00000512340	XCL1	P47992	114 aa		4.94	□□□□□ -1.62
NR1I3-231	ENST00000512340	HERVK_113	P63121	156 aa		4.94	□□□□□ -1.62
NR1I3-231	ENST00000512340	CD164L2	Q6UWJ8	174 aa		4.94	□□□□□ -1.62
NR1I3-231	ENST00000512340	C2orf91	Q6ZV80	131 aa		4.94	□□□□□ -1.62
NR1I3-231	ENST00000512340	RAB37	Q96AX2	223 aa		4.94	□□□□□ -1.62
NR1I3-231	ENST00000512340	ABCA13	Q86UQ4	5058 aa		4.94	□□□□□ -1.62
NR1I3-231	ENST00000512340		A0A1B0GWB2	263 aa		4.93	□□□□□ -1.62
NR1I3-231	ENST00000512340	CDK2AP2	O75956	126 aa		4.93	□□□□□ -1.62
NR1I3-231	ENST00000512340	NMU	P48645	174 aa		4.93	□□□□□ -1.62
NR1I3-231	ENST00000512340	KRTAP10-2	P60368	255 aa		4.93	□□□□□ -1.62
NR1I3-231	ENST00000512340	TMEM258	P61165	79 aa		4.93	□□□□□ -1.62
NR1I3-231	ENST00000512340	RPL39	P62891	51 aa	Known RBP	4.93	□□□□□ -1.62
NR1I3-231	ENST00000512340	LINC01620	Q4KN68	170 aa		4.93	□□□□□ -1.62
NR1I3-231	ENST00000512340	C9orf153	Q5TBE3	101 aa		4.93	□□□□□ -1.62
NR1I3-231	ENST00000512340		Q5XG85	94 aa		4.93	□□□□□ -1.62
NR1I3-231	ENST00000512340	FAM19A1	Q7Z5A9	133 aa		4.93	□□□□□ -1.62
NR1I3-231	ENST00000512340	C3orf22	Q8N5N4	141 aa		4.93	□□□□□ -1.62
NR1I3-231	ENST00000512340	LINC00526	Q96FQ7	95 aa		4.93	□□□□□ -1.62
NR1I3-231	ENST00000512340	TRBV20-1	A0A075B6N2	111 aa		4.92	□□□□□ -1.62
NR1I3-231	ENST00000512340	DPM2	O94777	84 aa		4.92	□□□□□ -1.62
NR1I3-231	ENST00000512340	CD164	Q04900	197 aa		4.92	□□□□□ -1.62
NR1I3-231	ENST00000512340	HRCT1	Q6UXD1	115 aa		4.92	□□□□□ -1.62
NR1I3-231	ENST00000512340	SCGB3A1	Q96QR1	104 aa		4.92	□□□□□ -1.62
NR1I3-231	ENST00000512340	TIMM17A	Q99595	171 aa		4.92	□□□□□ -1.62
NR1I3-231	ENST00000512340	IGHV3-64	A0A075B6Q5	118 aa		4.91	□□□□□ -1.62
NR1I3-231	ENST00000512340	TEN1	Q86WV5	123 aa		4.91	□□□□□ -1.62
NR1I3-231	ENST00000512340	MAPKAPK5-AS1	Q8N8E1	139 aa		4.91	□□□□□ -1.62
NR1I3-231	ENST00000512340	TOMM6	Q96B49	74 aa		4.91	□□□□□ -1.62
NR1I3-231	ENST00000512340	IMUP	Q9GZP8	106 aa		4.91	□□□□□ -1.62
NR1I3-231	ENST00000512340	IGLV4-3	A0A075B6K6	122 aa		4.9	□□□□□ -1.63
NR1I3-231	ENST00000512340	NDUFC2	O95298	119 aa		4.9	□□□□□ -1.63
NR1I3-231	ENST00000512340	CRYGA	P11844	174 aa		4.9	□□□□□ -1.63
NR1I3-231	ENST00000512340	CNBP	P62633	177 aa	Known RBP	4.9	□□□□□ -1.63
NR1I3-231	ENST00000512340	RNASE13	Q5GAN3	156 aa	Known RBP	4.9	□□□□□ -1.63
NR1I3-231	ENST00000512340	KRTAP26-1	Q6PEX3	210 aa		4.9	□□□□□ -1.63
NR1I3-231	ENST00000512340	CHCHD1	Q96BP2	118 aa	Known RBP	4.9	□□□□□ -1.63
NR1I3-231	ENST00000512340	DPH3	Q96FX2	82 aa		4.9	□□□□□ -1.63
NR1I3-231	ENST00000512340	HIGD1B	Q9P298	99 aa		4.9	□□□□□ -1.63
NR1I3-231	ENST00000512340	GVQW2	A0A096LPI5	108 aa	Predicted RBP	4.89	□□□□□ -1.63
NR1I3-231	ENST00000512340	LINC01546	A6NGU7	62 aa		4.89	□□□□□ -1.63
NR1I3-231	ENST00000512340	HBD	P02042	147 aa		4.89	□□□□□ -1.63
NR1I3-231	ENST00000512340	PRSS1	P07477	247 aa		4.89	□□□□□ -1.63
NR1I3-231	ENST00000512340	PRSS2	P07478	247 aa		4.89	□□□□□ -1.63
NR1I3-231	ENST00000512340	LYRM7	Q5U5X0	104 aa		4.89	□□□□□ -1.63
NR1I3-231	ENST00000512340	GAGE2A	Q6NT46	116 aa		4.89	□□□□□ -1.63
NR1I3-231	ENST00000512340	LINC00474	Q9P2X8	69 aa		4.89	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms