RNA–Protein interactions for RNA: ENST00000512229.6

PCDHA4-202, Transcript of protocadherin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHA4, Length 4,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-202ENST00000512229 CDK2AP2O75956 126 aa9.31□□□□□ -0.92
PCDHA4-202ENST00000512229 COX6A2Q02221 97 aa9.31□□□□□ -0.92
PCDHA4-202ENST00000512229 C14orf177Q52M58 125 aa9.31□□□□□ -0.92
PCDHA4-202ENST00000512229 CITED1Q99966 193 aa9.31□□□□□ -0.92
PCDHA4-202ENST00000512229 TEP1Q99973 2627 aaKnown RBP9.31□□□□□ -0.92
PCDHA4-202ENST00000512229 TMEM256-PLSCR3K7ERE1 68 aa9.31□□□□□ -0.92
PCDHA4-202ENST00000512229 Q8IZM0 81 aa9.31□□□□□ -0.92
PCDHA4-202ENST00000512229 A0A087WZ39 114 aa9.3□□□□□ -0.92
PCDHA4-202ENST00000512229 LINC01546A6NGU7 62 aa9.3□□□□□ -0.92
PCDHA4-202ENST00000512229 H3BQ85 93 aa9.3□□□□□ -0.92
PCDHA4-202ENST00000512229 G3V4G9 280 aa9.3□□□□□ -0.92
PCDHA4-202ENST00000512229 COX7BP24311 80 aa9.3□□□□□ -0.92
PCDHA4-202ENST00000512229 FUSP35637 526 aaKnown RBP eCLIP9.28□□□□□ -0.92
PCDHA4-202ENST00000512229 A0A1B0GUV1 79 aa9.27□□□□□ -0.92
PCDHA4-202ENST00000512229 RBM3P98179 157 aaKnown RBP9.27□□□□□ -0.92
PCDHA4-202ENST00000512229 C6orf99Q4VX62 202 aa9.27□□□□□ -0.92
PCDHA4-202ENST00000512229 TRACP01848 142 aa9.27□□□□□ -0.93
PCDHA4-202ENST00000512229 Q9UF83 564 aa9.27□□□□□ -0.93
PCDHA4-202ENST00000512229 hADV29S1A0JD25 119 aa9.27□□□□□ -0.93
PCDHA4-202ENST00000512229 LRBAP50851 2863 aa9.27□□□□□ -0.93
PCDHA4-202ENST00000512229 CYSRT1A8MQ03 144 aa9.26□□□□□ -0.93
PCDHA4-202ENST00000512229 TEX49A0A1B0GTD5 131 aa9.25□□□□□ -0.93
PCDHA4-202ENST00000512229 CHD6Q8TD26 2715 aa9.25□□□□□ -0.93
PCDHA4-202ENST00000512229 COX17Q14061 63 aa9.24□□□□□ -0.93
PCDHA4-202ENST00000512229 UNQ6190/PRO20217Q6UXQ8 127 aa9.24□□□□□ -0.93
PCDHA4-202ENST00000512229 NTM-AS1Q6ZSK4 140 aa9.24□□□□□ -0.93
PCDHA4-202ENST00000512229 UBE2AP49459 152 aa9.24□□□□□ -0.93
PCDHA4-202ENST00000512229 ADAMTSL4-AS1Q5T5F5 129 aa9.23□□□□□ -0.93
PCDHA4-202ENST00000512229 C14orf132Q9NPU4 83 aa9.23□□□□□ -0.93
PCDHA4-202ENST00000512229 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.23□□□□□ -0.93
PCDHA4-202ENST00000512229 SLPIP03973 132 aa9.23□□□□□ -0.93
PCDHA4-202ENST00000512229 KRTAP24-1Q3LI83 254 aa9.23□□□□□ -0.93
PCDHA4-202ENST00000512229 LST1O00453 97 aa9.22□□□□□ -0.93
PCDHA4-202ENST00000512229 KRTAP1-3Q8IUG1 177 aa9.22□□□□□ -0.93
PCDHA4-202ENST00000512229 MUC7Q8TAX7 377 aa9.22□□□□□ -0.93
PCDHA4-202ENST00000512229 IGKV3D-7A0A0C4DH55 119 aa9.21□□□□□ -0.93
PCDHA4-202ENST00000512229 PDE6GP18545 87 aa9.21□□□□□ -0.93
PCDHA4-202ENST00000512229 C9orf153Q5TBE3 101 aa9.21□□□□□ -0.93
PCDHA4-202ENST00000512229 SMIM11BQ8TCY0 68 aa9.21□□□□□ -0.93
PCDHA4-202ENST00000512229 UNC79Q9P2D8 2635 aa9.21□□□□□ -0.93
PCDHA4-202ENST00000512229 LYPD5Q6UWN5 251 aa9.21□□□□□ -0.93
PCDHA4-202ENST00000512229 X6R8D5 127 aa9.21□□□□□ -0.93
PCDHA4-202ENST00000512229 CELA1Q9UNI1 258 aa9.21□□□□□ -0.94
PCDHA4-202ENST00000512229 HIGD2AQ9BW72 106 aa9.2□□□□□ -0.94
PCDHA4-202ENST00000512229 RELNP78509 3460 aa9.2□□□□□ -0.94
PCDHA4-202ENST00000512229 NREPQ16612 68 aa9.2□□□□□ -0.94
PCDHA4-202ENST00000512229 C9orf116Q5BN46 136 aaPredicted RBP9.2□□□□□ -0.94
PCDHA4-202ENST00000512229 A8MTW9 85 aa9.19□□□□□ -0.94
PCDHA4-202ENST00000512229 TRAV23DV6A0A075B6W5 121 aa9.19□□□□□ -0.94
PCDHA4-202ENST00000512229 WFDC9Q8NEX5 89 aa9.19□□□□□ -0.94
PCDHA4-202ENST00000512229 WFDC10BQ8IUB3 73 aa9.18□□□□□ -0.94
PCDHA4-202ENST00000512229 IGHV3OR16-9A0A0B4J2B5 98 aa9.18□□□□□ -0.94
PCDHA4-202ENST00000512229 M0R378 163 aa9.18□□□□□ -0.94
PCDHA4-202ENST00000512229 FAM19A5Q7Z5A7 132 aaPredicted RBP9.18□□□□□ -0.94
PCDHA4-202ENST00000512229 EGFEM1PQ0D2K5 195 aa9.17□□□□□ -0.94
PCDHA4-202ENST00000512229 LINC00643Q86TS7 51 aa9.17□□□□□ -0.94
PCDHA4-202ENST00000512229 IGKV2-28A0A075B6P5 120 aa9.16□□□□□ -0.94
PCDHA4-202ENST00000512229 IGKV2D-28P01615 120 aa9.16□□□□□ -0.94
PCDHA4-202ENST00000512229 Q6ZQY7 126 aa9.16□□□□□ -0.94
PCDHA4-202ENST00000512229 IGLV5-39A0A0G2JS06 123 aa9.16□□□□□ -0.94
PCDHA4-202ENST00000512229 M0R2N4 97 aa9.15□□□□□ -0.94
PCDHA4-202ENST00000512229 TEX15Q9BXT5 2789 aa9.14□□□□□ -0.95
PCDHA4-202ENST00000512229 FAM19A1Q7Z5A9 133 aa9.14□□□□□ -0.95
PCDHA4-202ENST00000512229 FAM236AA0A1B0GUQ0 79 aa9.14□□□□□ -0.95
PCDHA4-202ENST00000512229 FAM236BA0A1B0GV22 79 aa9.14□□□□□ -0.95
PCDHA4-202ENST00000512229 RPL28P46779 137 aaKnown RBP9.13□□□□□ -0.95
PCDHA4-202ENST00000512229 KRTAP1-1Q07627 177 aa9.13□□□□□ -0.95
PCDHA4-202ENST00000512229 LINC01561Q8N1V8 128 aa9.13□□□□□ -0.95
PCDHA4-202ENST00000512229 ZFHX4Q86UP3 3567 aa9.13□□□□□ -0.95
PCDHA4-202ENST00000512229 PRR3P79522 188 aaKnown RBP9.13□□□□□ -0.95
PCDHA4-202ENST00000512229 ZNF73O43830 326 aaPredicted RBP9.13□□□□□ -0.95
PCDHA4-202ENST00000512229 LOC107984640A0A0U1RRK4 108 aa9.12□□□□□ -0.95
PCDHA4-202ENST00000512229 B9D2Q9BPU9 175 aa9.12□□□□□ -0.95
PCDHA4-202ENST00000512229 C6orf223Q8N319 242 aa9.12□□□□□ -0.95
PCDHA4-202ENST00000512229 IGLV5-45A0A087WSX0 123 aa9.11□□□□□ -0.95
PCDHA4-202ENST00000512229 A0A1B0GX51 115 aa9.11□□□□□ -0.95
PCDHA4-202ENST00000512229 NUPR2A6NF83 97 aa9.11□□□□□ -0.95
PCDHA4-202ENST00000512229 Q8NAQ8 132 aa9.11□□□□□ -0.95
PCDHA4-202ENST00000512229 STAB1Q9NY15 2570 aa9.1□□□□□ -0.95
PCDHA4-202ENST00000512229 MT-ATP8P03928 68 aa9.1□□□□□ -0.95
PCDHA4-202ENST00000512229 CSNK1G2-AS1Q8NCQ2 148 aa9.1□□□□□ -0.95
PCDHA4-202ENST00000512229 USP17L23D6RBM5 183 aa9.1□□□□□ -0.95
PCDHA4-202ENST00000512229 GCN1Q92616 2671 aaKnown RBP9.1□□□□□ -0.95
PCDHA4-202ENST00000512229 ITPR1Q14643 2758 aa9.1□□□□□ -0.95
PCDHA4-202ENST00000512229 C19orf73Q9NVV2 129 aa9.09□□□□□ -0.95
PCDHA4-202ENST00000512229 ASH1LQ9NR48 2969 aaKnown RBP9.09□□□□□ -0.95
PCDHA4-202ENST00000512229 ATOX1O00244 68 aa9.09□□□□□ -0.95
PCDHA4-202ENST00000512229 COL6A5A8TX70 2615 aa9.09□□□□□ -0.95
PCDHA4-202ENST00000512229 RPL37AP8A6NKH3 93 aa9.09□□□□□ -0.95
PCDHA4-202ENST00000512229 TRBV10-3A0A0K0K1G6 114 aa9.09□□□□□ -0.96
PCDHA4-202ENST00000512229 NDUFC2-KCTD14E9PQ53 114 aa9.08□□□□□ -0.96
PCDHA4-202ENST00000512229 ESRGQ1W209 222 aa9.08□□□□□ -0.96
PCDHA4-202ENST00000512229 NDUFC2O95298 119 aa9.08□□□□□ -0.96
PCDHA4-202ENST00000512229 SBSPONQ8IVN8 264 aa9.08□□□□□ -0.96
PCDHA4-202ENST00000512229 C2orf48Q96LS8 159 aa9.07□□□□□ -0.96
PCDHA4-202ENST00000512229 CRYBG3Q68DQ2 2970 aa9.07□□□□□ -0.96
PCDHA4-202ENST00000512229 A0A096LNI7 61 aa9.07□□□□□ -0.96
PCDHA4-202ENST00000512229 LY6G6CO95867 125 aa9.07□□□□□ -0.96
PCDHA4-202ENST00000512229 B5MCH6 92 aa9.07□□□□□ -0.96
PCDHA4-202ENST00000512229 NDUFB1O75438 58 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms