RNA–Protein interactions for RNA: ENST00000512094.5

NPHP3-210, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 721 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-210ENST00000512094 RIF1Q5UIP0 2472 aaKnown RBP-0.16□□□□□ -2.43
NPHP3-210ENST00000512094 PKD1L2Q7Z442 2459 aa-0.16□□□□□ -2.43
NPHP3-210ENST00000512094 TMEM218A2RU14 115 aa-0.16□□□□□ -2.44
NPHP3-210ENST00000512094 FAM223BA6NKX1 122 aa-0.16□□□□□ -2.44
NPHP3-210ENST00000512094 CCL22O00626 93 aa-0.16□□□□□ -2.44
NPHP3-210ENST00000512094 FGF7P21781 194 aa-0.16□□□□□ -2.44
NPHP3-210ENST00000512094 C1orf54Q8WWF1 131 aa-0.16□□□□□ -2.44
NPHP3-210ENST00000512094 CDC42SE2Q9NRR3 84 aa-0.16□□□□□ -2.44
NPHP3-210ENST00000512094 LINC00474Q9P2X8 69 aa-0.16□□□□□ -2.44
NPHP3-210ENST00000512094 CDKN2A-AS1Q9UH64 79 aa-0.16□□□□□ -2.44
NPHP3-210ENST00000512094 AP4S1Q9Y587 144 aa-0.16□□□□□ -2.44
NPHP3-210ENST00000512094 A0A0G2JMZ2 1700 aa-0.16□□□□□ -2.44
NPHP3-210ENST00000512094 CEP152O94986 1710 aa-0.16□□□□□ -2.44
NPHP3-210ENST00000512094 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.16□□□□□ -2.44
NPHP3-210ENST00000512094 C1orf167Q5SNV9 1468 aa-0.16□□□□□ -2.44
NPHP3-210ENST00000512094 NLRP1Q9C000 1473 aa-0.16□□□□□ -2.44
NPHP3-210ENST00000512094 CCDC168Q8NDH2 2452 aa-0.16□□□□□ -2.44
NPHP3-210ENST00000512094 MGAM2Q2M2H8 2515 aa-0.17□□□□□ -2.44
NPHP3-210ENST00000512094 SLIT1O75093 1534 aa-0.17□□□□□ -2.44
NPHP3-210ENST00000512094 EHBP1L1Q8N3D4 1523 aa-0.17□□□□□ -2.44
NPHP3-210ENST00000512094 TULP4Q9NRJ4 1543 aa-0.17□□□□□ -2.44
NPHP3-210ENST00000512094 A0A087WVE0 104 aa-0.17□□□□□ -2.44
NPHP3-210ENST00000512094 A0A0G2JND7 137 aa-0.17□□□□□ -2.44
NPHP3-210ENST00000512094 TRBV7-7A0A0K0K1E9 115 aa-0.17□□□□□ -2.44
NPHP3-210ENST00000512094 C7orf77A4D0Y5 90 aa-0.17□□□□□ -2.44
NPHP3-210ENST00000512094 OOSP1A8MZH6 123 aa-0.17□□□□□ -2.44
NPHP3-210ENST00000512094 TMEM262E9PQX1 116 aa-0.17□□□□□ -2.44
NPHP3-210ENST00000512094 H0Y9P7 68 aa-0.17□□□□□ -2.44
NPHP3-210ENST00000512094 H3BNG1 76 aa-0.17□□□□□ -2.44
NPHP3-210ENST00000512094 ARMS2P0C7Q2 107 aa-0.17□□□□□ -2.44
NPHP3-210ENST00000512094 S100A1P23297 94 aa-0.17□□□□□ -2.44
NPHP3-210ENST00000512094 CLIP1P30622 1438 aa-0.17□□□□□ -2.44
NPHP3-210ENST00000512094 RPL38P63173 70 aaKnown RBP-0.17□□□□□ -2.44
NPHP3-210ENST00000512094 PMCHL1Q16048 86 aa-0.17□□□□□ -2.44
NPHP3-210ENST00000512094 KRTAP6-2Q3LI66 62 aa-0.17□□□□□ -2.44
NPHP3-210ENST00000512094 PSMG4Q5JS54 123 aa-0.17□□□□□ -2.44
NPHP3-210ENST00000512094 GTF2H5Q6ZYL4 71 aa-0.17□□□□□ -2.44
NPHP3-210ENST00000512094 SMG6Q86US8 1419 aaKnown RBP-0.17□□□□□ -2.44
NPHP3-210ENST00000512094 XRN1Q8IZH2 1706 aaKnown RBP-0.17□□□□□ -2.44
NPHP3-210ENST00000512094 DEFB107AQ8IZN7 70 aa-0.17□□□□□ -2.44
NPHP3-210ENST00000512094 PP6455Q8WZ26 134 aa-0.17□□□□□ -2.44
NPHP3-210ENST00000512094 SPRR4Q96PI1 79 aa-0.17□□□□□ -2.44
NPHP3-210ENST00000512094 CGREF1Q99674 301 aa-0.17□□□□□ -2.44
NPHP3-210ENST00000512094 MRPL34Q9BQ48 92 aaKnown RBP-0.17□□□□□ -2.44
NPHP3-210ENST00000512094 SCAPERQ9BY12 1400 aa-0.17□□□□□ -2.44
NPHP3-210ENST00000512094 LPAP08519 4548 aa-0.17□□□□□ -2.44
NPHP3-210ENST00000512094 TOP2BQ02880 1626 aa-0.17□□□□□ -2.44
NPHP3-210ENST00000512094 PLEKHH2Q8IVE3 1493 aa-0.17□□□□□ -2.44
NPHP3-210ENST00000512094 TACC2O95359 2948 aa-0.17□□□□□ -2.44
NPHP3-210ENST00000512094 TEP1Q99973 2627 aaKnown RBP-0.17□□□□□ -2.44
NPHP3-210ENST00000512094 MYOM1P52179 1685 aa-0.18□□□□□ -2.44
NPHP3-210ENST00000512094 ROCK2O75116 1388 aaKnown RBP-0.18□□□□□ -2.44
NPHP3-210ENST00000512094 PDCD11Q14690 1871 aaKnown RBP-0.18□□□□□ -2.44
NPHP3-210ENST00000512094 FAM186AA6NE01 2351 aa-0.18□□□□□ -2.44
NPHP3-210ENST00000512094 TNXBP22105 4242 aa-0.18□□□□□ -2.44
NPHP3-210ENST00000512094 ABCC5O15440 1437 aa-0.18□□□□□ -2.44
NPHP3-210ENST00000512094 ANKRD50Q9ULJ7 1429 aa-0.18□□□□□ -2.44
NPHP3-210ENST00000512094 UTP20O75691 2785 aaKnown RBP-0.18□□□□□ -2.44
NPHP3-210ENST00000512094 COL14A1Q05707 1796 aaKnown RBP-0.18□□□□□ -2.44
NPHP3-210ENST00000512094 PAPPA2Q9BXP8 1791 aa-0.18□□□□□ -2.44
NPHP3-210ENST00000512094 UQCRHP07919 91 aa-0.18□□□□□ -2.44
NPHP3-210ENST00000512094 SPRR2EP22531 72 aa-0.18□□□□□ -2.44
NPHP3-210ENST00000512094 ASIPP42127 132 aa-0.18□□□□□ -2.44
NPHP3-210ENST00000512094 MT4P47944 62 aa-0.18□□□□□ -2.44
NPHP3-210ENST00000512094 PPP3R1P63098 170 aa-0.18□□□□□ -2.44
NPHP3-210ENST00000512094 HSD52Q0P140 79 aa-0.18□□□□□ -2.44
NPHP3-210ENST00000512094 NMSQ5H8A3 153 aa-0.18□□□□□ -2.44
NPHP3-210ENST00000512094 WFDC13Q8IUB5 93 aa-0.18□□□□□ -2.44
NPHP3-210ENST00000512094 DPH3P1Q9H4G8 78 aa-0.18□□□□□ -2.44
NPHP3-210ENST00000512094 LINC00846Q9NV44 126 aa-0.18□□□□□ -2.44
NPHP3-210ENST00000512094 HIGD1BQ9P298 99 aa-0.18□□□□□ -2.44
NPHP3-210ENST00000512094 GNG8Q9UK08 70 aa-0.18□□□□□ -2.44
NPHP3-210ENST00000512094 A2ML1A8K2U0 1454 aa-0.18□□□□□ -2.44
NPHP3-210ENST00000512094 ADGRL2O95490 1459 aa-0.18□□□□□ -2.44
NPHP3-210ENST00000512094 NKTRP30414 1462 aaKnown RBP-0.18□□□□□ -2.44
NPHP3-210ENST00000512094 TET3O43151 1660 aa-0.18□□□□□ -2.44
NPHP3-210ENST00000512094 SCN7AQ01118 1682 aa-0.18□□□□□ -2.44
NPHP3-210ENST00000512094 NUP188Q5SRE5 1749 aa-0.18□□□□□ -2.44
NPHP3-210ENST00000512094 EDC4Q6P2E9 1401 aaKnown RBP-0.19□□□□□ -2.44
NPHP3-210ENST00000512094 AKAP13Q12802 2813 aa-0.19□□□□□ -2.44
NPHP3-210ENST00000512094 LOC105371267A0A1B0GV96 52 aa-0.19□□□□□ -2.44
NPHP3-210ENST00000512094 D6R8Y8 96 aa-0.19□□□□□ -2.44
NPHP3-210ENST00000512094 GNGT2O14610 69 aa-0.19□□□□□ -2.44
NPHP3-210ENST00000512094 NDUFC1O43677 76 aa-0.19□□□□□ -2.44
NPHP3-210ENST00000512094 NDUFA2O43678 99 aa-0.19□□□□□ -2.44
NPHP3-210ENST00000512094 GNG4P50150 75 aa-0.19□□□□□ -2.44
NPHP3-210ENST00000512094 S100A12P80511 92 aa-0.19□□□□□ -2.44
NPHP3-210ENST00000512094 MRPS10P82664 201 aaKnown RBP-0.19□□□□□ -2.44
NPHP3-210ENST00000512094 SARNPP82979 210 aaKnown RBP-0.19□□□□□ -2.44
NPHP3-210ENST00000512094 RPL13AP3Q6NVV1 102 aa-0.19□□□□□ -2.44
NPHP3-210ENST00000512094 MUSTN1Q8IVN3 82 aa-0.19□□□□□ -2.44
NPHP3-210ENST00000512094 TMEM203Q969S6 136 aa-0.19□□□□□ -2.44
NPHP3-210ENST00000512094 CACFD1Q9UGQ2 172 aa-0.19□□□□□ -2.44
NPHP3-210ENST00000512094 MYOM2P54296 1465 aa-0.19□□□□□ -2.44
NPHP3-210ENST00000512094 MBD5Q9P267 1494 aa-0.19□□□□□ -2.44
NPHP3-210ENST00000512094 ROBO1Q9Y6N7 1651 aa-0.19□□□□□ -2.44
NPHP3-210ENST00000512094 ANKRD11Q6UB99 2663 aaPredicted RBP-0.19□□□□□ -2.44
NPHP3-210ENST00000512094 PRRC2CQ9Y520 2896 aaKnown RBP-0.19□□□□□ -2.44
NPHP3-210ENST00000512094 LRRC37AA6NMS7 1700 aa-0.19□□□□□ -2.44
NPHP3-210ENST00000512094 KNDC1Q76NI1 1749 aa-0.19□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms