RNA–Protein interactions for RNA: ENST00000511424.5

LIMCH1-212, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 3

Gene LIMCH1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-212ENST00000511424 IGLV2-18A0A075B6J9 118 aa1.58□□□□□ -2.16
LIMCH1-212ENST00000511424 IGKV2-28A0A075B6P5 120 aa1.58□□□□□ -2.16
LIMCH1-212ENST00000511424 A0A0J9YXV3 536 aa1.58□□□□□ -2.16
LIMCH1-212ENST00000511424 A0A1B0GUT8 65 aa1.58□□□□□ -2.16
LIMCH1-212ENST00000511424 SMIM9A6NGZ8 99 aa1.58□□□□□ -2.16
LIMCH1-212ENST00000511424 A8MWL6 223 aa1.58□□□□□ -2.16
LIMCH1-212ENST00000511424 D6R8Y8 96 aa1.58□□□□□ -2.16
LIMCH1-212ENST00000511424 IGKV2D-28P01615 120 aa1.58□□□□□ -2.16
LIMCH1-212ENST00000511424 LINC00694P0DN24 101 aa1.58□□□□□ -2.16
LIMCH1-212ENST00000511424 S100A4P26447 101 aaKnown RBP1.58□□□□□ -2.16
LIMCH1-212ENST00000511424 TSPOP30536 169 aa1.58□□□□□ -2.16
LIMCH1-212ENST00000511424 IFI27P40305 119 aaPredicted RBP1.58□□□□□ -2.16
LIMCH1-212ENST00000511424 ASIPP42127 132 aa1.58□□□□□ -2.16
LIMCH1-212ENST00000511424 RPL39P62891 51 aaKnown RBP1.58□□□□□ -2.16
LIMCH1-212ENST00000511424 HSD52Q0P140 79 aa1.58□□□□□ -2.16
LIMCH1-212ENST00000511424 SMAGPQ0VAQ4 97 aa1.58□□□□□ -2.16
LIMCH1-212ENST00000511424 BATFQ16520 125 aa1.58□□□□□ -2.16
LIMCH1-212ENST00000511424 SPANXN1Q5VSR9 72 aa1.58□□□□□ -2.16
LIMCH1-212ENST00000511424 FAM104BQ5XKR9 115 aa1.58□□□□□ -2.16
LIMCH1-212ENST00000511424 ZFP2Q6ZN57 461 aa1.58□□□□□ -2.16
LIMCH1-212ENST00000511424 OR2K2Q8NGT1 345 aa1.58□□□□□ -2.16
LIMCH1-212ENST00000511424 C18orf32Q8TCD1 76 aa1.58□□□□□ -2.16
LIMCH1-212ENST00000511424 PMCHL2Q9BQD1 86 aa1.58□□□□□ -2.16
LIMCH1-212ENST00000511424 TXNDC17Q9BRA2 123 aa1.58□□□□□ -2.16
LIMCH1-212ENST00000511424 VAMP8Q9BV40 100 aa1.58□□□□□ -2.16
LIMCH1-212ENST00000511424 GTSF1LQ9H1H1 148 aa1.58□□□□□ -2.16
LIMCH1-212ENST00000511424 SPANXA1Q9NS26 97 aa1.58□□□□□ -2.16
LIMCH1-212ENST00000511424 NAT8BQ9UHF3 227 aa1.58□□□□□ -2.16
LIMCH1-212ENST00000511424 LRP1BQ9NZR2 4599 aa1.58□□□□□ -2.16
LIMCH1-212ENST00000511424 FAT1Q14517 4588 aa1.57□□□□□ -2.16
LIMCH1-212ENST00000511424 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.57□□□□□ -2.16
LIMCH1-212ENST00000511424 IGKV2-29A2NJV5 120 aaPredicted RBP1.57□□□□□ -2.16
LIMCH1-212ENST00000511424 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.57□□□□□ -2.16
LIMCH1-212ENST00000511424 K7EP34 96 aa1.57□□□□□ -2.16
LIMCH1-212ENST00000511424 M0QY20 66 aa1.57□□□□□ -2.16
LIMCH1-212ENST00000511424 M0R2P5 195 aa1.57□□□□□ -2.16
LIMCH1-212ENST00000511424 APCSP02743 223 aa1.57□□□□□ -2.16
LIMCH1-212ENST00000511424 OR5AL1P0C617 328 aa1.57□□□□□ -2.16
LIMCH1-212ENST00000511424 TLX1NBP0CAT3 122 aa1.57□□□□□ -2.16
LIMCH1-212ENST00000511424 INSL3P51460 131 aa1.57□□□□□ -2.16
LIMCH1-212ENST00000511424 HBBP68871 147 aa1.57□□□□□ -2.16
LIMCH1-212ENST00000511424 RPL18AQ02543 176 aaKnown RBP1.57□□□□□ -2.16
LIMCH1-212ENST00000511424 RRN3P1Q2M238 152 aa1.57□□□□□ -2.16
LIMCH1-212ENST00000511424 ORMDL2Q53FV1 153 aa1.57□□□□□ -2.16
LIMCH1-212ENST00000511424 FA2HQ7L5A8 372 aa1.57□□□□□ -2.16
LIMCH1-212ENST00000511424 SLC25A29Q8N8R3 303 aa1.57□□□□□ -2.16
LIMCH1-212ENST00000511424 OR5A1Q8NGJ0 315 aa1.57□□□□□ -2.16
LIMCH1-212ENST00000511424 ZNRF2Q8NHG8 242 aa1.57□□□□□ -2.16
LIMCH1-212ENST00000511424 BTF3L4Q96K17 158 aa1.57□□□□□ -2.16
LIMCH1-212ENST00000511424 PRELID3AQ96N28 172 aa1.57□□□□□ -2.16
LIMCH1-212ENST00000511424 C18orf15Q96N68 181 aa1.57□□□□□ -2.16
LIMCH1-212ENST00000511424 ODF3Q96PU9 254 aa1.57□□□□□ -2.16
LIMCH1-212ENST00000511424 TM2D3Q9BRN9 247 aa1.57□□□□□ -2.16
LIMCH1-212ENST00000511424 HSPB8Q9UJY1 196 aa1.57□□□□□ -2.16
LIMCH1-212ENST00000511424 PHLDA3Q9Y5J5 127 aa1.57□□□□□ -2.16
LIMCH1-212ENST00000511424 LENEPQ9Y5L5 61 aa1.57□□□□□ -2.16
LIMCH1-212ENST00000511424 U3KQK5 164 aa1.57□□□□□ -2.16
LIMCH1-212ENST00000511424 APOBP04114 4563 aaKnown RBP1.56□□□□□ -2.16
LIMCH1-212ENST00000511424 IGLV4-60A0A075B6I1 120 aa1.56□□□□□ -2.16
LIMCH1-212ENST00000511424 TRGV2A0A075B6R0 118 aa1.56□□□□□ -2.16
LIMCH1-212ENST00000511424 TRAV8-6A0A0B4J262 113 aa1.56□□□□□ -2.16
LIMCH1-212ENST00000511424 IGHV3OR16-9A0A0B4J2B5 98 aa1.56□□□□□ -2.16
LIMCH1-212ENST00000511424 A0A1B0GVX0 72 aa1.56□□□□□ -2.16
LIMCH1-212ENST00000511424 A0A1B0GX51 115 aa1.56□□□□□ -2.16
LIMCH1-212ENST00000511424 F5H768 121 aa1.56□□□□□ -2.16
LIMCH1-212ENST00000511424 CKS2P33552 79 aa1.56□□□□□ -2.16
LIMCH1-212ENST00000511424 POLR2KP53803 58 aaKnown RBP1.56□□□□□ -2.16
LIMCH1-212ENST00000511424 COX6A2Q02221 97 aa1.56□□□□□ -2.16
LIMCH1-212ENST00000511424 ZNF56Q15929 161 aa1.56□□□□□ -2.16
LIMCH1-212ENST00000511424 ESRGQ1W209 222 aa1.56□□□□□ -2.16
LIMCH1-212ENST00000511424 SPATA45Q537H7 98 aa1.56□□□□□ -2.16
LIMCH1-212ENST00000511424 LINC00483Q53H64 154 aa1.56□□□□□ -2.16
LIMCH1-212ENST00000511424 BVES-AS1Q5T3Y7 98 aa1.56□□□□□ -2.16
LIMCH1-212ENST00000511424 AMMECR1LQ6DCA0 310 aa1.56□□□□□ -2.16
LIMCH1-212ENST00000511424 CLPSL2Q6UWE3 100 aa1.56□□□□□ -2.16
LIMCH1-212ENST00000511424 GTF2H5Q6ZYL4 71 aa1.56□□□□□ -2.16
LIMCH1-212ENST00000511424 ATOH7Q8N100 152 aa1.56□□□□□ -2.16
LIMCH1-212ENST00000511424 C15orf56Q8N910 161 aa1.56□□□□□ -2.16
LIMCH1-212ENST00000511424 TMEM263Q8WUH6 116 aaKnown RBP1.56□□□□□ -2.16
LIMCH1-212ENST00000511424 LINC00526Q96FQ7 95 aa1.56□□□□□ -2.16
LIMCH1-212ENST00000511424 KCNS1Q96KK3 526 aa1.56□□□□□ -2.16
LIMCH1-212ENST00000511424 TIMM17AQ99595 171 aa1.56□□□□□ -2.16
LIMCH1-212ENST00000511424 LINC00467Q9BRT7 94 aa1.56□□□□□ -2.16
LIMCH1-212ENST00000511424 TMEM243Q9BU79 118 aa1.56□□□□□ -2.16
LIMCH1-212ENST00000511424 CHCHD7Q9BUK0 85 aa1.56□□□□□ -2.16
LIMCH1-212ENST00000511424 GNB1LQ9BYB4 327 aa1.56□□□□□ -2.16
LIMCH1-212ENST00000511424 CNFNQ9BYD5 112 aa1.56□□□□□ -2.16
LIMCH1-212ENST00000511424 TTTY13Q9BZ97 58 aa1.56□□□□□ -2.16
LIMCH1-212ENST00000511424 TMEM191AQ9H0A3 160 aa1.56□□□□□ -2.16
LIMCH1-212ENST00000511424 HECTD4Q9Y4D8 3996 aa1.55□□□□□ -2.16
LIMCH1-212ENST00000511424 TRAV4A0A0B4J268 109 aa1.55□□□□□ -2.16
LIMCH1-212ENST00000511424 TRGV4A0A0C4DH28 118 aa1.55□□□□□ -2.16
LIMCH1-212ENST00000511424 IGHV1-24A0A0C4DH33 117 aa1.55□□□□□ -2.16
LIMCH1-212ENST00000511424 IGKV3OR2-268A0A0C4DH90 116 aa1.55□□□□□ -2.16
LIMCH1-212ENST00000511424 FAM240AA0A1B0GVK7 77 aa1.55□□□□□ -2.16
LIMCH1-212ENST00000511424 SDHAF1A6NFY7 115 aa1.55□□□□□ -2.16
LIMCH1-212ENST00000511424 IGLL5B9A064 214 aa1.55□□□□□ -2.16
LIMCH1-212ENST00000511424 NDUFC2-KCTD14E9PQ53 114 aa1.55□□□□□ -2.16
LIMCH1-212ENST00000511424 K7EMI3 77 aa1.55□□□□□ -2.16
LIMCH1-212ENST00000511424 M0R2N4 97 aa1.55□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms