RNA–Protein interactions for RNA: ENST00000511125.1

SMAD1-209, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 3,293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-209ENST00000511125 TNP2Q05952 138 aa5.31□□□□□ -1.56
SMAD1-209ENST00000511125 MYMXA0A1B0GTQ4 84 aa5.3□□□□□ -1.56
SMAD1-209ENST00000511125 TSTD3H0UI37 97 aa5.3□□□□□ -1.56
SMAD1-209ENST00000511125 APOMO95445 188 aa5.3□□□□□ -1.56
SMAD1-209ENST00000511125 SLPIP03973 132 aa5.3□□□□□ -1.56
SMAD1-209ENST00000511125 COX8AP10176 69 aa5.3□□□□□ -1.56
SMAD1-209ENST00000511125 CTAG1AP78358 180 aa5.3□□□□□ -1.56
SMAD1-209ENST00000511125 GAGE2EQ4V326 116 aa5.3□□□□□ -1.56
SMAD1-209ENST00000511125 Q6ZRU5 148 aa5.3□□□□□ -1.56
SMAD1-209ENST00000511125 RMI2Q96E14 147 aa5.3□□□□□ -1.56
SMAD1-209ENST00000511125 GAGE2DQ9UEU5 116 aa5.3□□□□□ -1.56
SMAD1-209ENST00000511125 K7EP13 123 aa5.3□□□□□ -1.56
SMAD1-209ENST00000511125 HNRNPA3P51991 378 aaKnown RBP5.3□□□□□ -1.56
SMAD1-209ENST00000511125 SRSF9Q13242 221 aaKnown RBP eCLIP5.29□□□□□ -1.56
SMAD1-209ENST00000511125 ADAMTSL4-AS1Q5T5F5 129 aa5.29□□□□□ -1.56
SMAD1-209ENST00000511125 Q6ZR54 194 aa5.29□□□□□ -1.56
SMAD1-209ENST00000511125 TM2D2Q9BX73 214 aa5.29□□□□□ -1.56
SMAD1-209ENST00000511125 XAGE1AQ9HD64 81 aa5.29□□□□□ -1.56
SMAD1-209ENST00000511125 IGLV5-39A0A0G2JS06 123 aa5.29□□□□□ -1.56
SMAD1-209ENST00000511125 EIF4EBP3O60516 100 aaPredicted RBP5.29□□□□□ -1.56
SMAD1-209ENST00000511125 KIAA0087Q14695 138 aa5.29□□□□□ -1.56
SMAD1-209ENST00000511125 IGKV2-24A0A0C4DH68 120 aa5.29□□□□□ -1.56
SMAD1-209ENST00000511125 HINT1P49773 126 aaPredicted RBP5.29□□□□□ -1.56
SMAD1-209ENST00000511125 A0A0J9YXY3 114 aa5.28□□□□□ -1.56
SMAD1-209ENST00000511125 FAM19A3Q7Z5A8 133 aa5.28□□□□□ -1.56
SMAD1-209ENST00000511125 UQCR10Q9UDW1 63 aa5.28□□□□□ -1.56
SMAD1-209ENST00000511125 HAMPP81172 84 aa5.28□□□□□ -1.56
SMAD1-209ENST00000511125 BOD1L2Q8IYS8 172 aa5.28□□□□□ -1.56
SMAD1-209ENST00000511125 DPH3Q96FX2 82 aa5.28□□□□□ -1.56
SMAD1-209ENST00000511125 HIST1H4GQ99525 98 aa5.28□□□□□ -1.56
SMAD1-209ENST00000511125 LCE6AA0A183 80 aa5.28□□□□□ -1.56
SMAD1-209ENST00000511125 GCSHP23434 173 aa5.28□□□□□ -1.56
SMAD1-209ENST00000511125 RPL18AQ02543 176 aaKnown RBP5.28□□□□□ -1.56
SMAD1-209ENST00000511125 GAGE2BQ13066 116 aa5.28□□□□□ -1.56
SMAD1-209ENST00000511125 Q6ZRN7 208 aaPredicted RBP5.28□□□□□ -1.56
SMAD1-209ENST00000511125 MIEN1Q9BRT3 115 aa5.28□□□□□ -1.56
SMAD1-209ENST00000511125 RTL8CO15255 209 aa5.27□□□□□ -1.57
SMAD1-209ENST00000511125 PRR3P79522 188 aaKnown RBP5.27□□□□□ -1.57
SMAD1-209ENST00000511125 C2orf91Q6ZV80 131 aa5.27□□□□□ -1.57
SMAD1-209ENST00000511125 C6orf48Q9UBA6 75 aa5.27□□□□□ -1.57
SMAD1-209ENST00000511125 RYR3Q15413 4870 aa5.27□□□□□ -1.57
SMAD1-209ENST00000511125 SYCNQ0VAF6 134 aa5.27□□□□□ -1.57
SMAD1-209ENST00000511125 Q8IZM0 81 aa5.27□□□□□ -1.57
SMAD1-209ENST00000511125 MIR7-3HGQ8N6C7 128 aa5.27□□□□□ -1.57
SMAD1-209ENST00000511125 NDUFA1O15239 70 aa5.26□□□□□ -1.57
SMAD1-209ENST00000511125 DDTP30046 118 aa5.26□□□□□ -1.57
SMAD1-209ENST00000511125 LRCOL1A6NCL2 159 aa5.26□□□□□ -1.57
SMAD1-209ENST00000511125 NTN5Q8WTR8 489 aaPredicted RBP5.26□□□□□ -1.57
SMAD1-209ENST00000511125 A0A087WTM6 91 aa5.26□□□□□ -1.57
SMAD1-209ENST00000511125 LINC00587B1AMM8 73 aa5.26□□□□□ -1.57
SMAD1-209ENST00000511125 CHTF8P0CG12 524 aa5.26□□□□□ -1.57
SMAD1-209ENST00000511125 C21orf62-AS1Q17RA5 79 aa5.26□□□□□ -1.57
SMAD1-209ENST00000511125 ERG28Q9UKR5 140 aa5.26□□□□□ -1.57
SMAD1-209ENST00000511125 COX11Q9Y6N1 276 aa5.26□□□□□ -1.57
SMAD1-209ENST00000511125 RYR2Q92736 4967 aa5.25□□□□□ -1.57
SMAD1-209ENST00000511125 CARD19Q96LW7 228 aa5.25□□□□□ -1.57
SMAD1-209ENST00000511125 ALMS1Q8TCU4 4167 aa5.25□□□□□ -1.57
SMAD1-209ENST00000511125 H7C2G1 150 aa5.24□□□□□ -1.57
SMAD1-209ENST00000511125 PTTG1IPP53801 180 aa5.24□□□□□ -1.57
SMAD1-209ENST00000511125 KRTAP10-2P60368 255 aa5.24□□□□□ -1.57
SMAD1-209ENST00000511125 SFTA2Q6UW10 78 aa5.24□□□□□ -1.57
SMAD1-209ENST00000511125 MUSTN1Q8IVN3 82 aa5.24□□□□□ -1.57
SMAD1-209ENST00000511125 GVQW2A0A096LPI5 108 aaPredicted RBP5.24□□□□□ -1.57
SMAD1-209ENST00000511125 NAA38Q9BRA0 125 aaKnown RBP5.24□□□□□ -1.57
SMAD1-209ENST00000511125 GAGE10A6NGK3 116 aa5.23□□□□□ -1.57
SMAD1-209ENST00000511125 K7ERJ3 54 aa5.23□□□□□ -1.57
SMAD1-209ENST00000511125 CIRBPQ14011 172 aaKnown RBP5.23□□□□□ -1.57
SMAD1-209ENST00000511125 Q6ZRP5 223 aa5.23□□□□□ -1.57
SMAD1-209ENST00000511125 Q8N814 137 aa5.23□□□□□ -1.57
SMAD1-209ENST00000511125 FAM168BA1KXE4 195 aa5.23□□□□□ -1.57
SMAD1-209ENST00000511125 FXYD2P54710 66 aa5.23□□□□□ -1.57
SMAD1-209ENST00000511125 SOSTDC1Q6X4U4 206 aa5.23□□□□□ -1.57
SMAD1-209ENST00000511125 Q6ZVH6 145 aa5.23□□□□□ -1.57
SMAD1-209ENST00000511125 RAB37Q96AX2 223 aa5.23□□□□□ -1.57
SMAD1-209ENST00000511125 DNAH6Q9C0G6 4158 aa5.22□□□□□ -1.57
SMAD1-209ENST00000511125 LITAFQ99732 161 aa5.22□□□□□ -1.57
SMAD1-209ENST00000511125 DNAH17Q9UFH2 4485 aa5.21□□□□□ -1.57
SMAD1-209ENST00000511125 IGLV5-52A0A0A0MRZ9 124 aa5.21□□□□□ -1.57
SMAD1-209ENST00000511125 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.21□□□□□ -1.57
SMAD1-209ENST00000511125 NHP2Q9NX24 153 aaKnown RBP5.21□□□□□ -1.57
SMAD1-209ENST00000511125 TMEM238C9JI98 176 aa5.21□□□□□ -1.58
SMAD1-209ENST00000511125 PANO1I0J062 215 aa5.21□□□□□ -1.58
SMAD1-209ENST00000511125 NCR3O14931 201 aa5.21□□□□□ -1.58
SMAD1-209ENST00000511125 Q8NDZ9 215 aa5.21□□□□□ -1.58
SMAD1-209ENST00000511125 SND1-IT1Q9HBX3 110 aa5.21□□□□□ -1.58
SMAD1-209ENST00000511125 DNAH11Q96DT5 4516 aa5.21□□□□□ -1.58
SMAD1-209ENST00000511125 A4D1N5 150 aa5.21□□□□□ -1.58
SMAD1-209ENST00000511125 EREGO14944 169 aa5.21□□□□□ -1.58
SMAD1-209ENST00000511125 HERV-K104P63124 156 aa5.21□□□□□ -1.58
SMAD1-209ENST00000511125 FAM19A5Q7Z5A7 132 aaPredicted RBP5.21□□□□□ -1.58
SMAD1-209ENST00000511125 A0A096LNI7 61 aa5.2□□□□□ -1.58
SMAD1-209ENST00000511125 OR13C6PQ8NH95 151 aa5.2□□□□□ -1.58
SMAD1-209ENST00000511125 LINC00308Q8TCZ7 52 aa5.2□□□□□ -1.58
SMAD1-209ENST00000511125 HECTD4Q9Y4D8 3996 aa5.2□□□□□ -1.58
SMAD1-209ENST00000511125 CXCL5P42830 114 aa5.19□□□□□ -1.58
SMAD1-209ENST00000511125 LINC01561Q8N1V8 128 aa5.19□□□□□ -1.58
SMAD1-209ENST00000511125 FAT2Q9NYQ8 4349 aa5.19□□□□□ -1.58
SMAD1-209ENST00000511125 DLEU1O43261 78 aa5.19□□□□□ -1.58
SMAD1-209ENST00000511125 CEND1Q8N111 149 aa5.19□□□□□ -1.58
SMAD1-209ENST00000511125 C2orf48Q96LS8 159 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms