RNA–Protein interactions for RNA: ENST00000509589.5

CYSTM1-203, Transcript of cysteine rich transmembrane module containing 1, humanhuman

TSL 3

Gene CYSTM1, Length 665 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-203ENST00000509589 RAB5AP20339 215 aa6.05□□□□□ -1.44
CYSTM1-203ENST00000509589 TYMSOSQ8TAI1 123 aa6.05□□□□□ -1.44
CYSTM1-203ENST00000509589 TMEM141Q96I45 108 aa6.05□□□□□ -1.44
CYSTM1-203ENST00000509589 MUC17Q685J3 4493 aa6.05□□□□□ -1.44
CYSTM1-203ENST00000509589 GAGE10A6NGK3 116 aa6.04□□□□□ -1.44
CYSTM1-203ENST00000509589 RPL37AP8A6NKH3 93 aa6.04□□□□□ -1.44
CYSTM1-203ENST00000509589 CKS1BP61024 79 aa6.04□□□□□ -1.44
CYSTM1-203ENST00000509589 RPL32P62910 135 aaKnown RBP6.04□□□□□ -1.44
CYSTM1-203ENST00000509589 TEX43Q6ZNM6 134 aa6.04□□□□□ -1.44
CYSTM1-203ENST00000509589 COLCA2A8K830 154 aa6.03□□□□□ -1.44
CYSTM1-203ENST00000509589 C6orf226Q5I0X4 101 aa6.03□□□□□ -1.44
CYSTM1-203ENST00000509589 PRELID3AQ96N28 172 aa6.03□□□□□ -1.44
CYSTM1-203ENST00000509589 YPEL4Q96NS1 127 aa6.03□□□□□ -1.44
CYSTM1-203ENST00000509589 NUPR1O60356 82 aa6.02□□□□□ -1.45
CYSTM1-203ENST00000509589 COX19Q49B96 90 aa6.02□□□□□ -1.45
CYSTM1-203ENST00000509589 TMEM136Q6ZRR5 245 aa6.02□□□□□ -1.45
CYSTM1-203ENST00000509589 LINC00173Q6ZV60 143 aa6.02□□□□□ -1.45
CYSTM1-203ENST00000509589 ATP5L2Q7Z4Y8 100 aa6.02□□□□□ -1.45
CYSTM1-203ENST00000509589 C2orf88Q9BSF0 95 aa6.02□□□□□ -1.45
CYSTM1-203ENST00000509589 ALKBH7Q9BT30 221 aaPredicted RBP6.02□□□□□ -1.45
CYSTM1-203ENST00000509589 A0A1B0GW15 77 aa6.01□□□□□ -1.45
CYSTM1-203ENST00000509589 S100A8P05109 93 aa6.01□□□□□ -1.45
CYSTM1-203ENST00000509589 CRYGAP11844 174 aa6.01□□□□□ -1.45
CYSTM1-203ENST00000509589 Q6ZN92 141 aa6.01□□□□□ -1.45
CYSTM1-203ENST00000509589 MRPL55Q7Z7F7 128 aaKnown RBP6.01□□□□□ -1.45
CYSTM1-203ENST00000509589 ORMDL3Q8N138 153 aa6.01□□□□□ -1.45
CYSTM1-203ENST00000509589 A0A1B0GXF2 115 aa6□□□□□ -1.45
CYSTM1-203ENST00000509589 BCE1O60756 84 aa6□□□□□ -1.45
CYSTM1-203ENST00000509589 RPL28P46779 137 aaKnown RBP6□□□□□ -1.45
CYSTM1-203ENST00000509589 KRTAP13-2Q52LG2 175 aa6□□□□□ -1.45
CYSTM1-203ENST00000509589 LBHQ53QV2 105 aaPredicted RBP6□□□□□ -1.45
CYSTM1-203ENST00000509589 C2orf66Q6UXQ4 117 aa6□□□□□ -1.45
CYSTM1-203ENST00000509589 LINC00167Q96N53 147 aa6□□□□□ -1.45
CYSTM1-203ENST00000509589 CDIP1Q9H305 208 aa6□□□□□ -1.45
CYSTM1-203ENST00000509589 VCX2Q9H322 139 aa6□□□□□ -1.45
CYSTM1-203ENST00000509589 PYGO1Q9Y3Y4 419 aa6□□□□□ -1.45
CYSTM1-203ENST00000509589 FSIP2Q5CZC0 6907 aa5.99□□□□□ -1.45
CYSTM1-203ENST00000509589 RAB5BP61020 215 aa5.99□□□□□ -1.45
CYSTM1-203ENST00000509589 GNB1LQ9BYB4 327 aa5.99□□□□□ -1.45
CYSTM1-203ENST00000509589 MAP1LC3AQ9H492 121 aa5.99□□□□□ -1.45
CYSTM1-203ENST00000509589 CDKN2A-AS1Q9UH64 79 aa5.99□□□□□ -1.45
CYSTM1-203ENST00000509589 CYSLTR1Q9Y271 337 aa5.99□□□□□ -1.45
CYSTM1-203ENST00000509589 PPBPP02775 128 aa5.98□□□□□ -1.45
CYSTM1-203ENST00000509589 UBE2AP49459 152 aa5.98□□□□□ -1.45
CYSTM1-203ENST00000509589 Q8IZM0 81 aa5.98□□□□□ -1.45
CYSTM1-203ENST00000509589 IGKV2-28A0A075B6P5 120 aa5.97□□□□□ -1.45
CYSTM1-203ENST00000509589 F8VRH5 84 aa5.97□□□□□ -1.45
CYSTM1-203ENST00000509589 IGKV2D-28P01615 120 aa5.97□□□□□ -1.45
CYSTM1-203ENST00000509589 LINC00304Q8N9R0 145 aa5.97□□□□□ -1.45
CYSTM1-203ENST00000509589 AMELXQ99217 191 aa5.97□□□□□ -1.45
CYSTM1-203ENST00000509589 GEMIN7Q9H840 131 aaKnown RBP5.97□□□□□ -1.45
CYSTM1-203ENST00000509589 TRAPPC1Q9Y5R8 145 aa5.97□□□□□ -1.45
CYSTM1-203ENST00000509589 TRGC2P03986 189 aa5.96□□□□□ -1.46
CYSTM1-203ENST00000509589 PRLHP81277 87 aa5.96□□□□□ -1.46
CYSTM1-203ENST00000509589 LINC01561Q8N1V8 128 aa5.96□□□□□ -1.46
CYSTM1-203ENST00000509589 Q8N8P6 123 aa5.96□□□□□ -1.46
CYSTM1-203ENST00000509589 MRPL18Q9H0U6 180 aaKnown RBP5.96□□□□□ -1.46
CYSTM1-203ENST00000509589 IGLV7-46A0A075B6I9 117 aa5.95□□□□□ -1.46
CYSTM1-203ENST00000509589 FABP9Q0Z7S8 132 aa5.95□□□□□ -1.46
CYSTM1-203ENST00000509589 TPRXLQ17RH7 258 aa5.95□□□□□ -1.46
CYSTM1-203ENST00000509589 NKAPP1Q8N9T2 125 aa5.95□□□□□ -1.46
CYSTM1-203ENST00000509589 SPINK8P0C7L1 97 aa5.94□□□□□ -1.46
CYSTM1-203ENST00000509589 HERVK_113P63121 156 aa5.94□□□□□ -1.46
CYSTM1-203ENST00000509589 TP73-AS1Q9UF72 201 aa5.94□□□□□ -1.46
CYSTM1-203ENST00000509589 IGKV2D-26A0A0A0MRZ7 120 aa5.93□□□□□ -1.46
CYSTM1-203ENST00000509589 IGIPA6NJ69 53 aa5.93□□□□□ -1.46
CYSTM1-203ENST00000509589 SMIM1B2RUZ4 78 aa5.93□□□□□ -1.46
CYSTM1-203ENST00000509589 ORMDL2Q53FV1 153 aa5.93□□□□□ -1.46
CYSTM1-203ENST00000509589 FAM19A1Q7Z5A9 133 aa5.93□□□□□ -1.46
CYSTM1-203ENST00000509589 KRTAP13-1Q8IUC0 172 aa5.93□□□□□ -1.46
CYSTM1-203ENST00000509589 C3orf22Q8N5N4 141 aa5.93□□□□□ -1.46
CYSTM1-203ENST00000509589 COX7B2Q8TF08 81 aa5.93□□□□□ -1.46
CYSTM1-203ENST00000509589 TMA7Q9Y2S6 64 aaKnown RBP5.93□□□□□ -1.46
CYSTM1-203ENST00000509589 TMEM238C9JI98 176 aa5.92□□□□□ -1.46
CYSTM1-203ENST00000509589 KIAA1644Q3SXP7 199 aa5.92□□□□□ -1.46
CYSTM1-203ENST00000509589 PRSS47A8MTI9 375 aa5.91□□□□□ -1.46
CYSTM1-203ENST00000509589 HIST1H2BKO60814 126 aa5.91□□□□□ -1.46
CYSTM1-203ENST00000509589 HIST1H2BJP06899 126 aa5.91□□□□□ -1.46
CYSTM1-203ENST00000509589 HIST1H2BOP23527 126 aa5.91□□□□□ -1.46
CYSTM1-203ENST00000509589 HIST1H2BBP33778 126 aa5.91□□□□□ -1.46
CYSTM1-203ENST00000509589 PFN2P35080 140 aa5.91□□□□□ -1.46
CYSTM1-203ENST00000509589 HIST1H2BDP58876 126 aa5.91□□□□□ -1.46
CYSTM1-203ENST00000509589 HIST1H2BCP62807 126 aa5.91□□□□□ -1.46
CYSTM1-203ENST00000509589 HIST2H2BEQ16778 126 aa5.91□□□□□ -1.46
CYSTM1-203ENST00000509589 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.91□□□□□ -1.46
CYSTM1-203ENST00000509589 FAM19A3Q7Z5A8 133 aa5.91□□□□□ -1.46
CYSTM1-203ENST00000509589 HIST1H2BHQ93079 126 aa5.91□□□□□ -1.46
CYSTM1-203ENST00000509589 HIST1H2BNQ99877 126 aa5.91□□□□□ -1.46
CYSTM1-203ENST00000509589 HIST1H2BMQ99879 126 aa5.91□□□□□ -1.46
CYSTM1-203ENST00000509589 PPDPFQ9H3Y8 114 aa5.91□□□□□ -1.46
CYSTM1-203ENST00000509589 S100A6P06703 90 aa5.9□□□□□ -1.46
CYSTM1-203ENST00000509589 CXCL5P42830 114 aa5.9□□□□□ -1.46
CYSTM1-203ENST00000509589 SEC11AP67812 179 aa5.9□□□□□ -1.46
CYSTM1-203ENST00000509589 SCGB3A1Q96QR1 104 aa5.9□□□□□ -1.46
CYSTM1-203ENST00000509589 LAMTOR2Q9Y2Q5 125 aa5.9□□□□□ -1.46
CYSTM1-203ENST00000509589 FAM229BQ4G0N7 80 aa5.89□□□□□ -1.47
CYSTM1-203ENST00000509589 LCE2DQ5TA82 110 aaPredicted RBP5.89□□□□□ -1.47
CYSTM1-203ENST00000509589 NDUFA6P56556 154 aa5.88□□□□□ -1.47
CYSTM1-203ENST00000509589 PDZD11Q5EBL8 140 aa5.88□□□□□ -1.47
CYSTM1-203ENST00000509589 PAPPA-AS1Q5QFB9 102 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms