RNA–Protein interactions for RNA: ENST00000509109.5

CCSER1-208, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 1 (best)

Gene CCSER1, Length 1,070 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-208ENST00000509109 PNRC1Q12796 327 aaPredicted RBP4.59□□□□□ -1.67
CCSER1-208ENST00000509109 C9orf116Q5BN46 136 aaPredicted RBP4.59□□□□□ -1.67
CCSER1-208ENST00000509109 PAPPA-AS1Q5QFB9 102 aa4.59□□□□□ -1.67
CCSER1-208ENST00000509109 Q6ZN92 141 aa4.59□□□□□ -1.67
CCSER1-208ENST00000509109 C2orf88Q9BSF0 95 aa4.59□□□□□ -1.67
CCSER1-208ENST00000509109 RNF213Q63HN8 5207 aa4.59□□□□□ -1.68
CCSER1-208ENST00000509109 IGHV3OR16-9A0A0B4J2B5 98 aa4.58□□□□□ -1.68
CCSER1-208ENST00000509109 C9JQL5 133 aa4.58□□□□□ -1.68
CCSER1-208ENST00000509109 TMEM136Q6ZRR5 245 aa4.58□□□□□ -1.68
CCSER1-208ENST00000509109 PRELID3AQ96N28 172 aa4.58□□□□□ -1.68
CCSER1-208ENST00000509109 MAP1LC3AQ9H492 121 aa4.58□□□□□ -1.68
CCSER1-208ENST00000509109 PYGO1Q9Y3Y4 419 aa4.58□□□□□ -1.68
CCSER1-208ENST00000509109 A0A087WZ39 114 aa4.57□□□□□ -1.68
CCSER1-208ENST00000509109 K7EMI3 77 aa4.57□□□□□ -1.68
CCSER1-208ENST00000509109 MT-ND4LP03901 98 aa4.57□□□□□ -1.68
CCSER1-208ENST00000509109 TLX1NBP0CAT3 122 aa4.57□□□□□ -1.68
CCSER1-208ENST00000509109 SNRPEP62304 92 aaKnown RBP4.57□□□□□ -1.68
CCSER1-208ENST00000509109 SRSF9Q13242 221 aaKnown RBP eCLIP4.57□□□□□ -1.68
CCSER1-208ENST00000509109 C1orf137Q5JT78 98 aa4.57□□□□□ -1.68
CCSER1-208ENST00000509109 TEX43Q6ZNM6 134 aa4.57□□□□□ -1.68
CCSER1-208ENST00000509109 DIRC1Q969H9 104 aa4.57□□□□□ -1.68
CCSER1-208ENST00000509109 TMEM141Q96I45 108 aa4.57□□□□□ -1.68
CCSER1-208ENST00000509109 OPRPNQ99935 248 aaPredicted RBP4.57□□□□□ -1.68
CCSER1-208ENST00000509109 PSORS1C2Q9UIG4 136 aa4.57□□□□□ -1.68
CCSER1-208ENST00000509109 CYSLTR1Q9Y271 337 aa4.57□□□□□ -1.68
CCSER1-208ENST00000509109 TRBV30A0A0K0K1B3 111 aa4.56□□□□□ -1.68
CCSER1-208ENST00000509109 A0A1W2PNN7 141 aa4.56□□□□□ -1.68
CCSER1-208ENST00000509109 G0S2P27469 103 aa4.56□□□□□ -1.68
CCSER1-208ENST00000509109 RAB14P61106 215 aa4.56□□□□□ -1.68
CCSER1-208ENST00000509109 LCE1EQ5T753 118 aa4.56□□□□□ -1.68
CCSER1-208ENST00000509109 PACRGQ96M98 296 aaPredicted RBP4.56□□□□□ -1.68
CCSER1-208ENST00000509109 PAM16Q9Y3D7 125 aa4.56□□□□□ -1.68
CCSER1-208ENST00000509109 IGLV4-3A0A075B6K6 122 aa4.55□□□□□ -1.68
CCSER1-208ENST00000509109 A0A1B0GVG6 124 aa4.55□□□□□ -1.68
CCSER1-208ENST00000509109 KRTAP10-8P60410 259 aa4.55□□□□□ -1.68
CCSER1-208ENST00000509109 SEC11AP67812 179 aa4.55□□□□□ -1.68
CCSER1-208ENST00000509109 ORMDL2Q53FV1 153 aa4.55□□□□□ -1.68
CCSER1-208ENST00000509109 LINC00242Q5T6M2 205 aa4.55□□□□□ -1.68
CCSER1-208ENST00000509109 PHF5AQ7RTV0 110 aaKnown RBP4.55□□□□□ -1.68
CCSER1-208ENST00000509109 FAM19A5Q7Z5A7 132 aaPredicted RBP4.55□□□□□ -1.68
CCSER1-208ENST00000509109 LINC01561Q8N1V8 128 aa4.55□□□□□ -1.68
CCSER1-208ENST00000509109 C6orf48Q9UBA6 75 aa4.55□□□□□ -1.68
CCSER1-208ENST00000509109 LOC389332A0A1B0GUA5 103 aa4.54□□□□□ -1.68
CCSER1-208ENST00000509109 NDUFC2-KCTD14E9PQ53 114 aa4.54□□□□□ -1.68
CCSER1-208ENST00000509109 M0QXV9 152 aa4.54□□□□□ -1.68
CCSER1-208ENST00000509109 IGLV7-43P04211 117 aa4.54□□□□□ -1.68
CCSER1-208ENST00000509109 UBE2D1P51668 147 aa4.54□□□□□ -1.68
CCSER1-208ENST00000509109 CKS1BP61024 79 aa4.54□□□□□ -1.68
CCSER1-208ENST00000509109 UBE2BP63146 152 aa4.54□□□□□ -1.68
CCSER1-208ENST00000509109 GAGE2EQ4V326 116 aa4.54□□□□□ -1.68
CCSER1-208ENST00000509109 C2orf66Q6UXQ4 117 aa4.54□□□□□ -1.68
CCSER1-208ENST00000509109 UNQ6190/PRO20217Q6UXQ8 127 aa4.54□□□□□ -1.68
CCSER1-208ENST00000509109 Q8N8P6 123 aa4.54□□□□□ -1.68
CCSER1-208ENST00000509109 FAM104AQ969W3 186 aa4.54□□□□□ -1.68
CCSER1-208ENST00000509109 VCX2Q9H322 139 aa4.54□□□□□ -1.68
CCSER1-208ENST00000509109 NXT2Q9NPJ8 142 aaKnown RBP4.54□□□□□ -1.68
CCSER1-208ENST00000509109 GAGE2DQ9UEU5 116 aa4.54□□□□□ -1.68
CCSER1-208ENST00000509109 H0Y9J4 135 aa4.53□□□□□ -1.68
CCSER1-208ENST00000509109 HERVK_113P63121 156 aa4.53□□□□□ -1.68
CCSER1-208ENST00000509109 FAM168BA1KXE4 195 aa4.52□□□□□ -1.69
CCSER1-208ENST00000509109 LINC01549A6NIU2 74 aa4.52□□□□□ -1.69
CCSER1-208ENST00000509109 KIAA0087Q14695 138 aa4.52□□□□□ -1.69
CCSER1-208ENST00000509109 LBHQ53QV2 105 aaPredicted RBP4.52□□□□□ -1.69
CCSER1-208ENST00000509109 Q8IZM0 81 aa4.52□□□□□ -1.69
CCSER1-208ENST00000509109 GEMIN7Q9H840 131 aaKnown RBP4.52□□□□□ -1.69
CCSER1-208ENST00000509109 TOMM7Q9P0U1 55 aa4.52□□□□□ -1.69
CCSER1-208ENST00000509109 IGLV1-50A0A075B6I6 118 aa4.51□□□□□ -1.69
CCSER1-208ENST00000509109 RPL13AP40429 203 aaKnown RBP4.51□□□□□ -1.69
CCSER1-208ENST00000509109 CXCL5P42830 114 aa4.51□□□□□ -1.69
CCSER1-208ENST00000509109 C6orf226Q5I0X4 101 aa4.51□□□□□ -1.69
CCSER1-208ENST00000509109 C2orf82Q6UX34 121 aa4.51□□□□□ -1.69
CCSER1-208ENST00000509109 AMELXQ99217 191 aa4.51□□□□□ -1.69
CCSER1-208ENST00000509109 TIMM17AQ99595 171 aa4.51□□□□□ -1.69
CCSER1-208ENST00000509109 ALKBH7Q9BT30 221 aaPredicted RBP4.51□□□□□ -1.69
CCSER1-208ENST00000509109 IGLV5-37A0A075B6J1 123 aa4.5□□□□□ -1.69
CCSER1-208ENST00000509109 TRAV9-1A0A075B6T8 112 aa4.5□□□□□ -1.69
CCSER1-208ENST00000509109 IGIPA6NJ69 53 aa4.5□□□□□ -1.69
CCSER1-208ENST00000509109 F8VRH5 84 aa4.5□□□□□ -1.69
CCSER1-208ENST00000509109 SEC61BP60468 96 aaKnown RBP4.5□□□□□ -1.69
CCSER1-208ENST00000509109 LINC00173Q6ZV60 143 aa4.5□□□□□ -1.69
CCSER1-208ENST00000509109 FAM19A3Q7Z5A8 133 aa4.5□□□□□ -1.69
CCSER1-208ENST00000509109 C5orf52A6NGY3 159 aa4.49□□□□□ -1.69
CCSER1-208ENST00000509109 NUPR1O60356 82 aa4.49□□□□□ -1.69
CCSER1-208ENST00000509109 S100PP25815 95 aa4.49□□□□□ -1.69
CCSER1-208ENST00000509109 C9orf129Q5T035 196 aaKnown RBP4.49□□□□□ -1.69
CCSER1-208ENST00000509109 UQCC3Q6UW78 93 aa4.49□□□□□ -1.69
CCSER1-208ENST00000509109 LINC00469Q8N7U9 141 aa4.49□□□□□ -1.69
CCSER1-208ENST00000509109 COX19Q49B96 90 aa4.48□□□□□ -1.69
CCSER1-208ENST00000509109 CLLU1Q5K131 121 aa4.48□□□□□ -1.69
CCSER1-208ENST00000509109 ERASQ7Z444 233 aa4.48□□□□□ -1.69
CCSER1-208ENST00000509109 TOMM6Q96B49 74 aa4.48□□□□□ -1.69
CCSER1-208ENST00000509109 SCGB3A1Q96QR1 104 aa4.48□□□□□ -1.69
CCSER1-208ENST00000509109 TP73-AS1Q9UF72 201 aa4.48□□□□□ -1.69
CCSER1-208ENST00000509109 CDKN2A-AS1Q9UH64 79 aa4.48□□□□□ -1.69
CCSER1-208ENST00000509109 PDZD11Q5EBL8 140 aa4.47□□□□□ -1.69
CCSER1-208ENST00000509109 ZC2HC1BQ5TFG8 222 aa4.47□□□□□ -1.69
CCSER1-208ENST00000509109 GAGE2AQ6NT46 116 aa4.47□□□□□ -1.69
CCSER1-208ENST00000509109 Q75L30 129 aa4.47□□□□□ -1.69
CCSER1-208ENST00000509109 MRPL55Q7Z7F7 128 aaKnown RBP4.47□□□□□ -1.69
CCSER1-208ENST00000509109 SMCO4Q9NRQ5 59 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms