RNA–Protein interactions for RNA: ENST00000509102.5

UBE3D-207, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,246 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-207ENST00000509102 TOMM7Q9P0U1 55 aa11.61□□□□□ -0.55
UBE3D-207ENST00000509102 GAGE2EQ4V326 116 aa11.6□□□□□ -0.55
UBE3D-207ENST00000509102 C6orf226Q5I0X4 101 aa11.6□□□□□ -0.55
UBE3D-207ENST00000509102 GAGE2DQ9UEU5 116 aa11.6□□□□□ -0.55
UBE3D-207ENST00000509102 REG3GQ6UW15 175 aa11.59□□□□□ -0.55
UBE3D-207ENST00000509102 NDUFC2-KCTD14E9PQ53 114 aa11.58□□□□□ -0.56
UBE3D-207ENST00000509102 C2orf82Q6UX34 121 aa11.58□□□□□ -0.56
UBE3D-207ENST00000509102 Q8IZM0 81 aa11.58□□□□□ -0.56
UBE3D-207ENST00000509102 LINC01546A6NGU7 62 aa11.56□□□□□ -0.56
UBE3D-207ENST00000509102 APOC3P02656 99 aa11.56□□□□□ -0.56
UBE3D-207ENST00000509102 PHF5AQ7RTV0 110 aaKnown RBP11.56□□□□□ -0.56
UBE3D-207ENST00000509102 LINC00469Q8N7U9 141 aa11.56□□□□□ -0.56
UBE3D-207ENST00000509102 CDKN2A-AS1Q9UH64 79 aa11.56□□□□□ -0.56
UBE3D-207ENST00000509102 SNAPINO95295 136 aa11.55□□□□□ -0.56
UBE3D-207ENST00000509102 FAM19A5Q7Z5A7 132 aaPredicted RBP11.55□□□□□ -0.56
UBE3D-207ENST00000509102 SVBPQ8N300 66 aa11.55□□□□□ -0.56
UBE3D-207ENST00000509102 PSORS1C2Q9UIG4 136 aa11.55□□□□□ -0.56
UBE3D-207ENST00000509102 LOC100996750A0A140TA64 210 aa11.54□□□□□ -0.56
UBE3D-207ENST00000509102 CXCL5P42830 114 aa11.54□□□□□ -0.56
UBE3D-207ENST00000509102 KRTAP4-6Q9BYQ5 205 aa11.54□□□□□ -0.56
UBE3D-207ENST00000509102 PLA2G2DQ9UNK4 145 aa11.54□□□□□ -0.56
UBE3D-207ENST00000509102 TRAPPC1Q9Y5R8 145 aa11.54□□□□□ -0.56
UBE3D-207ENST00000509102 TINCRA0A1B0GVN0 87 aa11.53□□□□□ -0.56
UBE3D-207ENST00000509102 MT1HL1P0DM35 61 aa11.53□□□□□ -0.56
UBE3D-207ENST00000509102 C1orf137Q5JT78 98 aa11.53□□□□□ -0.56
UBE3D-207ENST00000509102 LINC01600Q96MT4 127 aa11.53□□□□□ -0.56
UBE3D-207ENST00000509102 FAM168BA1KXE4 195 aa11.52□□□□□ -0.57
UBE3D-207ENST00000509102 F8VRH5 84 aa11.52□□□□□ -0.57
UBE3D-207ENST00000509102 PMVKQ15126 192 aa11.52□□□□□ -0.57
UBE3D-207ENST00000509102 M0QXV9 152 aa11.51□□□□□ -0.57
UBE3D-207ENST00000509102 UBE2BP63146 152 aa11.51□□□□□ -0.57
UBE3D-207ENST00000509102 SRSF9Q13242 221 aaKnown RBP eCLIP11.51□□□□□ -0.57
UBE3D-207ENST00000509102 CST9LQ9H4G1 147 aa11.51□□□□□ -0.57
UBE3D-207ENST00000509102 PDZD11Q5EBL8 140 aa11.5□□□□□ -0.57
UBE3D-207ENST00000509102 H3BRM9 83 aa11.49□□□□□ -0.57
UBE3D-207ENST00000509102 RAB5BP61020 215 aa11.49□□□□□ -0.57
UBE3D-207ENST00000509102 SMIM1B2RUZ4 78 aa11.48□□□□□ -0.57
UBE3D-207ENST00000509102 LINC00614P0C842 121 aa11.48□□□□□ -0.57
UBE3D-207ENST00000509102 COX7B2Q8TF08 81 aa11.48□□□□□ -0.57
UBE3D-207ENST00000509102 IGLV5-45A0A087WSX0 123 aa11.47□□□□□ -0.57
UBE3D-207ENST00000509102 NDUFA6P56556 154 aa11.47□□□□□ -0.57
UBE3D-207ENST00000509102 C18orf32Q8TCD1 76 aa11.47□□□□□ -0.57
UBE3D-207ENST00000509102 HBDP02042 147 aa11.46□□□□□ -0.57
UBE3D-207ENST00000509102 C9orf129Q5T035 196 aaKnown RBP11.46□□□□□ -0.57
UBE3D-207ENST00000509102 IGLV7-43P04211 117 aa11.45□□□□□ -0.58
UBE3D-207ENST00000509102 DIRC1Q969H9 104 aa11.45□□□□□ -0.58
UBE3D-207ENST00000509102 SPINK8P0C7L1 97 aa11.44□□□□□ -0.58
UBE3D-207ENST00000509102 XAGE1AQ9HD64 81 aa11.44□□□□□ -0.58
UBE3D-207ENST00000509102 ATP5LO75964 103 aa11.43□□□□□ -0.58
UBE3D-207ENST00000509102 LBHQ53QV2 105 aaPredicted RBP11.43□□□□□ -0.58
UBE3D-207ENST00000509102 HMCN2Q8NDA2 5059 aa11.43□□□□□ -0.58
UBE3D-207ENST00000509102 IGLC3P0DOY3 106 aa11.41□□□□□ -0.58
UBE3D-207ENST00000509102 KRTAP7-1Q8IUC3 87 aa11.41□□□□□ -0.58
UBE3D-207ENST00000509102 A0A096LNJ9 63 aa11.39□□□□□ -0.59
UBE3D-207ENST00000509102 PMCHL1Q16048 86 aa11.39□□□□□ -0.59
UBE3D-207ENST00000509102 URB1-AS1Q96HZ7 61 aa11.39□□□□□ -0.59
UBE3D-207ENST00000509102 C22orf24Q9Y442 160 aa11.39□□□□□ -0.59
UBE3D-207ENST00000509102 KRTAP10-8P60410 259 aa11.38□□□□□ -0.59
UBE3D-207ENST00000509102 ODF1Q14990 250 aa11.38□□□□□ -0.59
UBE3D-207ENST00000509102 TP73-AS1Q9UF72 201 aa11.38□□□□□ -0.59
UBE3D-207ENST00000509102 H0Y9J4 135 aa11.37□□□□□ -0.59
UBE3D-207ENST00000509102 NUPR1O60356 82 aa11.37□□□□□ -0.59
UBE3D-207ENST00000509102 BAGE3Q86Y29 109 aa11.37□□□□□ -0.59
UBE3D-207ENST00000509102 KRTAP11-1Q8IUC1 163 aa11.37□□□□□ -0.59
UBE3D-207ENST00000509102 MRPL55Q7Z7F7 128 aaKnown RBP11.36□□□□□ -0.59
UBE3D-207ENST00000509102 CHCHD1Q96BP2 118 aaKnown RBP11.36□□□□□ -0.59
UBE3D-207ENST00000509102 ZNF22P17026 224 aaPredicted RBP11.35□□□□□ -0.59
UBE3D-207ENST00000509102 TMEM170BQ5T4T1 132 aa11.35□□□□□ -0.59
UBE3D-207ENST00000509102 SFTA2Q6UW10 78 aa11.35□□□□□ -0.59
UBE3D-207ENST00000509102 IGLV5-39A0A0G2JS06 123 aa11.34□□□□□ -0.59
UBE3D-207ENST00000509102 TNXBP22105 4242 aa11.33□□□□□ -0.6
UBE3D-207ENST00000509102 NKAPP1Q8N9T2 125 aa11.33□□□□□ -0.6
UBE3D-207ENST00000509102 YPEL4Q96NS1 127 aa11.32□□□□□ -0.6
UBE3D-207ENST00000509102 CHTOPQ9Y3Y2 248 aaKnown RBP11.32□□□□□ -0.6
UBE3D-207ENST00000509102 HSBP1O75506 76 aa11.31□□□□□ -0.6
UBE3D-207ENST00000509102 PFN2P35080 140 aa11.31□□□□□ -0.6
UBE3D-207ENST00000509102 C11orf86A6NJI1 115 aa11.3□□□□□ -0.6
UBE3D-207ENST00000509102 ZNF861PO60384 105 aa11.3□□□□□ -0.6
UBE3D-207ENST00000509102 COX17Q14061 63 aa11.3□□□□□ -0.6
UBE3D-207ENST00000509102 CBLN2Q8IUK8 224 aa11.3□□□□□ -0.6
UBE3D-207ENST00000509102 IFI27L1Q96BM0 104 aa11.3□□□□□ -0.6
UBE3D-207ENST00000509102 IGLV1-50A0A075B6I6 118 aa11.29□□□□□ -0.6
UBE3D-207ENST00000509102 ERG28Q9UKR5 140 aa11.29□□□□□ -0.6
UBE3D-207ENST00000509102 TRAV12-1A0A0B4J245 112 aa11.28□□□□□ -0.6
UBE3D-207ENST00000509102 RPL28P46779 137 aaKnown RBP11.28□□□□□ -0.6
UBE3D-207ENST00000509102 IGLV5-37A0A075B6J1 123 aa11.27□□□□□ -0.61
UBE3D-207ENST00000509102 BCE1O60756 84 aa11.27□□□□□ -0.61
UBE3D-207ENST00000509102 PRR26Q8N8Z3 221 aa11.27□□□□□ -0.61
UBE3D-207ENST00000509102 LINC00167Q96N53 147 aa11.27□□□□□ -0.61
UBE3D-207ENST00000509102 GAGE10A6NGK3 116 aa11.26□□□□□ -0.61
UBE3D-207ENST00000509102 RPL37AP8A6NKH3 93 aa11.26□□□□□ -0.61
UBE3D-207ENST00000509102 RPL13AP40429 203 aaKnown RBP11.26□□□□□ -0.61
UBE3D-207ENST00000509102 RPL24P83731 157 aaKnown RBP11.26□□□□□ -0.61
UBE3D-207ENST00000509102 ZNF625Q96I27 306 aaPredicted RBP11.25□□□□□ -0.61
UBE3D-207ENST00000509102 TRGC2P03986 189 aa11.24□□□□□ -0.61
UBE3D-207ENST00000509102 SND1-IT1Q9HBX3 110 aa11.24□□□□□ -0.61
UBE3D-207ENST00000509102 FAM19A2Q8N3H0 131 aa11.22□□□□□ -0.61
UBE3D-207ENST00000509102 TMEM223A0PJW6 202 aa11.21□□□□□ -0.61
UBE3D-207ENST00000509102 ATP6V1G1O75348 118 aa11.21□□□□□ -0.61
UBE3D-207ENST00000509102 KRTAP1-4P0C5Y4 121 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms