RNA–Protein interactions for RNA: ENST00000509014.2

CALCOCO2-212, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-212ENST00000509014 MRPL52Q86TS9 123 aaKnown RBP2.78□□□□□ -1.96
CALCOCO2-212ENST00000509014 OR2D3Q8NGH3 330 aa2.78□□□□□ -1.96
CALCOCO2-212ENST00000509014 STOML3Q8TAV4 291 aa2.78□□□□□ -1.96
CALCOCO2-212ENST00000509014 IMMP2LQ96T52 175 aa2.78□□□□□ -1.96
CALCOCO2-212ENST00000509014 TCEAL7Q9BRU2 100 aa2.78□□□□□ -1.96
CALCOCO2-212ENST00000509014 LCE3DQ9BYE3 92 aa2.78□□□□□ -1.96
CALCOCO2-212ENST00000509014 SDHAF1A6NFY7 115 aa2.77□□□□□ -1.97
CALCOCO2-212ENST00000509014 C1orf196B1AJZ1 125 aa2.77□□□□□ -1.97
CALCOCO2-212ENST00000509014 I3L3M4 83 aa2.77□□□□□ -1.97
CALCOCO2-212ENST00000509014 NUPR1O60356 82 aa2.77□□□□□ -1.97
CALCOCO2-212ENST00000509014 S100A9P06702 114 aaKnown RBP2.77□□□□□ -1.97
CALCOCO2-212ENST00000509014 CTAG1AP78358 180 aa2.77□□□□□ -1.97
CALCOCO2-212ENST00000509014 RNASE13Q5GAN3 156 aaKnown RBP2.77□□□□□ -1.97
CALCOCO2-212ENST00000509014 LINC00337Q8N6G1 96 aa2.77□□□□□ -1.97
CALCOCO2-212ENST00000509014 OR10D4PQ8NGN7 298 aa2.77□□□□□ -1.97
CALCOCO2-212ENST00000509014 HIST1H4GQ99525 98 aa2.77□□□□□ -1.97
CALCOCO2-212ENST00000509014 SYNE2Q8WXH0 6885 aaKnown RBP2.76□□□□□ -1.97
CALCOCO2-212ENST00000509014 TRBV6-5A0A0K0K1A5 114 aa2.76□□□□□ -1.97
CALCOCO2-212ENST00000509014 MAP1LC3B2A6NCE7 125 aa2.76□□□□□ -1.97
CALCOCO2-212ENST00000509014 F2Z2F3 143 aa2.76□□□□□ -1.97
CALCOCO2-212ENST00000509014 NDUFA1O15239 70 aa2.76□□□□□ -1.97
CALCOCO2-212ENST00000509014 GIPP09681 153 aaPredicted RBP2.76□□□□□ -1.97
CALCOCO2-212ENST00000509014 PMCHP20382 165 aa2.76□□□□□ -1.97
CALCOCO2-212ENST00000509014 RPL28P46779 137 aaKnown RBP2.76□□□□□ -1.97
CALCOCO2-212ENST00000509014 FOXA3P55318 350 aaPredicted RBP2.76□□□□□ -1.97
CALCOCO2-212ENST00000509014 RPS20P60866 119 aaKnown RBP2.76□□□□□ -1.97
CALCOCO2-212ENST00000509014 TMEM241Q24JQ0 296 aa2.76□□□□□ -1.97
CALCOCO2-212ENST00000509014 FAM229BQ4G0N7 80 aa2.76□□□□□ -1.97
CALCOCO2-212ENST00000509014 RPL7L1Q6DKI1 246 aaKnown RBP2.76□□□□□ -1.97
CALCOCO2-212ENST00000509014 Q6ZN92 141 aa2.76□□□□□ -1.97
CALCOCO2-212ENST00000509014 FP248Q71RG6 208 aaPredicted RBP2.76□□□□□ -1.97
CALCOCO2-212ENST00000509014 ORAOV1Q8WV07 137 aa2.76□□□□□ -1.97
CALCOCO2-212ENST00000509014 MRAP2Q96G30 205 aa2.76□□□□□ -1.97
CALCOCO2-212ENST00000509014 CCDC32Q9BV29 185 aa2.76□□□□□ -1.97
CALCOCO2-212ENST00000509014 MAP1LC3BQ9GZQ8 125 aa2.76□□□□□ -1.97
CALCOCO2-212ENST00000509014 RNASE7Q9H1E1 156 aaKnown RBP2.76□□□□□ -1.97
CALCOCO2-212ENST00000509014 TMEM242Q9NWH2 141 aa2.76□□□□□ -1.97
CALCOCO2-212ENST00000509014 ALG5Q9Y673 324 aa2.76□□□□□ -1.97
CALCOCO2-212ENST00000509014 FLGP20930 4061 aaPredicted RBP2.76□□□□□ -1.97
CALCOCO2-212ENST00000509014 TRAV13-1A0A0B4J241 112 aa2.75□□□□□ -1.97
CALCOCO2-212ENST00000509014 BCE1O60756 84 aa2.75□□□□□ -1.97
CALCOCO2-212ENST00000509014 KIAA0087Q14695 138 aa2.75□□□□□ -1.97
CALCOCO2-212ENST00000509014 UQCC3Q6UW78 93 aa2.75□□□□□ -1.97
CALCOCO2-212ENST00000509014 KRTAP13-1Q8IUC0 172 aa2.75□□□□□ -1.97
CALCOCO2-212ENST00000509014 C9orf62Q8N4C0 152 aa2.75□□□□□ -1.97
CALCOCO2-212ENST00000509014 CNFNQ9BYD5 112 aa2.75□□□□□ -1.97
CALCOCO2-212ENST00000509014 VCX2Q9H322 139 aa2.75□□□□□ -1.97
CALCOCO2-212ENST00000509014 CYTL1Q9NRR1 136 aa2.75□□□□□ -1.97
CALCOCO2-212ENST00000509014 UBE2D4Q9Y2X8 147 aa2.75□□□□□ -1.97
CALCOCO2-212ENST00000509014 C22orf24Q9Y442 160 aa2.75□□□□□ -1.97
CALCOCO2-212ENST00000509014 IGHV3OR16-9A0A0B4J2B5 98 aa2.74□□□□□ -1.97
CALCOCO2-212ENST00000509014 C7orf77A4D0Y5 90 aa2.74□□□□□ -1.97
CALCOCO2-212ENST00000509014 NDUFC2-KCTD14E9PQ53 114 aa2.74□□□□□ -1.97
CALCOCO2-212ENST00000509014 SSNA1O43805 119 aa2.74□□□□□ -1.97
CALCOCO2-212ENST00000509014 IFNA1P01562 189 aa2.74□□□□□ -1.97
CALCOCO2-212ENST00000509014 RPL35P42766 123 aaKnown RBP2.74□□□□□ -1.97
CALCOCO2-212ENST00000509014 POLR2KP53803 58 aaKnown RBP2.74□□□□□ -1.97
CALCOCO2-212ENST00000509014 Q5BKY6 102 aa2.74□□□□□ -1.97
CALCOCO2-212ENST00000509014 AKR1C8PQ5T2L2 129 aa2.74□□□□□ -1.97
CALCOCO2-212ENST00000509014 Q6ZUT4 128 aa2.74□□□□□ -1.97
CALCOCO2-212ENST00000509014 C3orf22Q8N5N4 141 aa2.74□□□□□ -1.97
CALCOCO2-212ENST00000509014 ENKURQ8TC29 256 aa2.74□□□□□ -1.97
CALCOCO2-212ENST00000509014 MARVELD1Q9BSK0 173 aa2.74□□□□□ -1.97
CALCOCO2-212ENST00000509014 CSDC2Q9Y534 153 aaKnown RBP2.74□□□□□ -1.97
CALCOCO2-212ENST00000509014 USH2AO75445 5202 aa2.74□□□□□ -1.97
CALCOCO2-212ENST00000509014 FCGBPQ9Y6R7 5405 aaPredicted RBP2.73□□□□□ -1.97
CALCOCO2-212ENST00000509014 IGKV2D-26A0A0A0MRZ7 120 aa2.73□□□□□ -1.97
CALCOCO2-212ENST00000509014 TRBV30A0A0K0K1B3 111 aa2.73□□□□□ -1.97
CALCOCO2-212ENST00000509014 TRBV27A0A0K0K1C4 114 aa2.73□□□□□ -1.97
CALCOCO2-212ENST00000509014 RAB19A4D1S5 217 aa2.73□□□□□ -1.97
CALCOCO2-212ENST00000509014 CENPWQ5EE01 88 aa2.73□□□□□ -1.97
CALCOCO2-212ENST00000509014 TEX261Q6UWH6 196 aa2.73□□□□□ -1.97
CALCOCO2-212ENST00000509014 C2orf82Q6UX34 121 aa2.73□□□□□ -1.97
CALCOCO2-212ENST00000509014 ST20Q9HBF5 79 aa2.73□□□□□ -1.97
CALCOCO2-212ENST00000509014 MACF1Q9UPN3 7388 aaKnown RBP2.73□□□□□ -1.97
CALCOCO2-212ENST00000509014 BORCS7-ASMTA0A0B4J1R7 106 aa2.72□□□□□ -1.97
CALCOCO2-212ENST00000509014 A0A1B0GV50 99 aa2.72□□□□□ -1.97
CALCOCO2-212ENST00000509014 XKRY2A2RUG3 117 aa2.72□□□□□ -1.97
CALCOCO2-212ENST00000509014 UPK1BO75841 260 aa2.72□□□□□ -1.97
CALCOCO2-212ENST00000509014 IFITM3Q01628 133 aa2.72□□□□□ -1.97
CALCOCO2-212ENST00000509014 RGS21Q2M5E4 152 aa2.72□□□□□ -1.97
CALCOCO2-212ENST00000509014 MRPL55Q7Z7F7 128 aaKnown RBP2.72□□□□□ -1.97
CALCOCO2-212ENST00000509014 LINC00469Q8N7U9 141 aa2.72□□□□□ -1.97
CALCOCO2-212ENST00000509014 MBD3L1Q8WWY6 194 aa2.72□□□□□ -1.97
CALCOCO2-212ENST00000509014 PACRGQ96M98 296 aaPredicted RBP2.72□□□□□ -1.97
CALCOCO2-212ENST00000509014 TP73-AS1Q9UF72 201 aa2.72□□□□□ -1.97
CALCOCO2-212ENST00000509014 TRBV20OR9-2A0A075B6H5 130 aa2.71□□□□□ -1.98
CALCOCO2-212ENST00000509014 ZNF727A8MUV8 499 aa2.71□□□□□ -1.98
CALCOCO2-212ENST00000509014 S100A1P23297 94 aa2.71□□□□□ -1.98
CALCOCO2-212ENST00000509014 SPAG11AQ6PDA7 123 aa2.71□□□□□ -1.98
CALCOCO2-212ENST00000509014 KCNRGQ8N5I3 272 aa2.71□□□□□ -1.98
CALCOCO2-212ENST00000509014 SFT2D1Q8WV19 159 aa2.71□□□□□ -1.98
CALCOCO2-212ENST00000509014 TIMM21Q9BVV7 248 aa2.71□□□□□ -1.98
CALCOCO2-212ENST00000509014 XAGE1AQ9HD64 81 aa2.71□□□□□ -1.98
CALCOCO2-212ENST00000509014 A0A096LNJ9 63 aa2.7□□□□□ -1.98
CALCOCO2-212ENST00000509014 M0R2T5 61 aa2.7□□□□□ -1.98
CALCOCO2-212ENST00000509014 CCL20P78556 96 aa2.7□□□□□ -1.98
CALCOCO2-212ENST00000509014 SLC7A5P1Q8MH63 180 aa2.7□□□□□ -1.98
CALCOCO2-212ENST00000509014 S100ZQ8WXG8 99 aa2.7□□□□□ -1.98
CALCOCO2-212ENST00000509014 SMIM12Q96EX1 92 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms