RNA–Protein interactions for RNA: ENST00000508869.5

TMCC1-208, Transcript of transmembrane and coiled-coil domain family 1, humanhuman

TSL 3

Gene TMCC1, Length 467 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCC1-208ENST00000508869 PCP2Q8IVA1 136 aa2.03□□□□□ -2.08
TMCC1-208ENST00000508869 PPP1R1CQ8WVI7 109 aa2.03□□□□□ -2.08
TMCC1-208ENST00000508869 HIST1H2BAQ96A08 127 aa2.03□□□□□ -2.08
TMCC1-208ENST00000508869 RETNLBQ9BQ08 111 aa2.03□□□□□ -2.08
TMCC1-208ENST00000508869 PSMG3Q9BT73 122 aaPredicted RBP2.03□□□□□ -2.08
TMCC1-208ENST00000508869 SMIM3Q9BZL3 60 aa2.03□□□□□ -2.08
TMCC1-208ENST00000508869 C8orf17Q9NRJ1 99 aa2.03□□□□□ -2.08
TMCC1-208ENST00000508869 TMEM167BQ9NRX6 74 aa2.03□□□□□ -2.08
TMCC1-208ENST00000508869 RBM12B-AS1Q9P1G2 102 aa2.03□□□□□ -2.08
TMCC1-208ENST00000508869 ZFP30Q9Y2G7 519 aa2.03□□□□□ -2.08
TMCC1-208ENST00000508869 FCGBPQ9Y6R7 5405 aaPredicted RBP2.02□□□□□ -2.09
TMCC1-208ENST00000508869 LOC107984640A0A0U1RRK4 108 aa2.02□□□□□ -2.09
TMCC1-208ENST00000508869 MUC21A0A140T8X8 626 aa2.02□□□□□ -2.09
TMCC1-208ENST00000508869 LINC00959A0A1B0GUT2 108 aa2.02□□□□□ -2.09
TMCC1-208ENST00000508869 NDUFS5O43920 106 aa2.02□□□□□ -2.09
TMCC1-208ENST00000508869 MPC2O95563 127 aa2.02□□□□□ -2.09
TMCC1-208ENST00000508869 CXorf1O96002 111 aa2.02□□□□□ -2.09
TMCC1-208ENST00000508869 NTF3P20783 257 aa2.02□□□□□ -2.09
TMCC1-208ENST00000508869 ATP6V0CP27449 155 aa2.02□□□□□ -2.09
TMCC1-208ENST00000508869 S100A5P33763 92 aa2.02□□□□□ -2.09
TMCC1-208ENST00000508869 SULT1A2P50226 295 aa2.02□□□□□ -2.09
TMCC1-208ENST00000508869 NKX2-5P52952 324 aaPredicted RBP2.02□□□□□ -2.09
TMCC1-208ENST00000508869 RNASE13Q5GAN3 156 aaKnown RBP2.02□□□□□ -2.09
TMCC1-208ENST00000508869 MRPL52Q86TS9 123 aaKnown RBP2.02□□□□□ -2.09
TMCC1-208ENST00000508869 OR5A1Q8NGJ0 315 aa2.02□□□□□ -2.09
TMCC1-208ENST00000508869 FMC1Q96HJ9 113 aa2.02□□□□□ -2.09
TMCC1-208ENST00000508869 AP1S3Q96PC3 154 aa2.02□□□□□ -2.09
TMCC1-208ENST00000508869 PKIGQ9Y2B9 76 aa2.02□□□□□ -2.09
TMCC1-208ENST00000508869 CCL25O15444 150 aa2.01□□□□□ -2.09
TMCC1-208ENST00000508869 FGF6P10767 208 aa2.01□□□□□ -2.09
TMCC1-208ENST00000508869 ESDP10768 282 aa2.01□□□□□ -2.09
TMCC1-208ENST00000508869 XCL1P47992 114 aa2.01□□□□□ -2.09
TMCC1-208ENST00000508869 DEFA3P59666 94 aa2.01□□□□□ -2.09
TMCC1-208ENST00000508869 CTAG1AP78358 180 aa2.01□□□□□ -2.09
TMCC1-208ENST00000508869 Q5W150 140 aa2.01□□□□□ -2.09
TMCC1-208ENST00000508869 KRTAP5-7Q6L8G8 165 aa2.01□□□□□ -2.09
TMCC1-208ENST00000508869 RASL11AQ6T310 242 aa2.01□□□□□ -2.09
TMCC1-208ENST00000508869 KRTAP13-1Q8IUC0 172 aa2.01□□□□□ -2.09
TMCC1-208ENST00000508869 SCGB1C1Q8TD33 95 aa2.01□□□□□ -2.09
TMCC1-208ENST00000508869 CAMK2N2Q96S95 79 aa2.01□□□□□ -2.09
TMCC1-208ENST00000508869 TCEAL7Q9BRU2 100 aa2.01□□□□□ -2.09
TMCC1-208ENST00000508869 CNFNQ9BYD5 112 aa2.01□□□□□ -2.09
TMCC1-208ENST00000508869 SND1-IT1Q9HBX3 110 aa2.01□□□□□ -2.09
TMCC1-208ENST00000508869 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2□□□□□ -2.09
TMCC1-208ENST00000508869 TRAV1-1A0A0B4J248 108 aa2□□□□□ -2.09
TMCC1-208ENST00000508869 IGKV3OR2-268A0A0C4DH90 116 aa2□□□□□ -2.09
TMCC1-208ENST00000508869 CTXND1A0A1B0GTU2 59 aa2□□□□□ -2.09
TMCC1-208ENST00000508869 IGKV2-29A2NJV5 120 aaPredicted RBP2□□□□□ -2.09
TMCC1-208ENST00000508869 C19orf71A6NCJ1 209 aa2□□□□□ -2.09
TMCC1-208ENST00000508869 BPY2O14599 106 aa2□□□□□ -2.09
TMCC1-208ENST00000508869 ZNF25P17030 456 aaPredicted RBP2□□□□□ -2.09
TMCC1-208ENST00000508869 UBE2D1P51668 147 aa2□□□□□ -2.09
TMCC1-208ENST00000508869 SERF2P84101 59 aa2□□□□□ -2.09
TMCC1-208ENST00000508869 SS18Q15532 418 aa2□□□□□ -2.09
TMCC1-208ENST00000508869 LINC00483Q53H64 154 aa2□□□□□ -2.09
TMCC1-208ENST00000508869 GATD1Q8NB37 220 aa2□□□□□ -2.09
TMCC1-208ENST00000508869 ENKURQ8TC29 256 aa2□□□□□ -2.09
TMCC1-208ENST00000508869 RPL39LQ96EH5 51 aaKnown RBP2□□□□□ -2.09
TMCC1-208ENST00000508869 NKX6-2Q9C056 277 aaPredicted RBP2□□□□□ -2.09
TMCC1-208ENST00000508869 NIT2Q9NQR4 276 aa2□□□□□ -2.09
TMCC1-208ENST00000508869 CDC42SE2Q9NRR3 84 aa2□□□□□ -2.09
TMCC1-208ENST00000508869 MRPL35Q9NZE8 188 aaKnown RBP2□□□□□ -2.09
TMCC1-208ENST00000508869 TNFSF18Q9UNG2 199 aa2□□□□□ -2.09
TMCC1-208ENST00000508869 C8orf87E5RJ46 101 aa1.99□□□□□ -2.09
TMCC1-208ENST00000508869 G3V3Q6 166 aa1.99□□□□□ -2.09
TMCC1-208ENST00000508869 NCR2O95944 276 aa1.99□□□□□ -2.09
TMCC1-208ENST00000508869 S100A6P06703 90 aa1.99□□□□□ -2.09
TMCC1-208ENST00000508869 MGPP08493 103 aa1.99□□□□□ -2.09
TMCC1-208ENST00000508869 IFITM3Q01628 133 aa1.99□□□□□ -2.09
TMCC1-208ENST00000508869 PMVKQ15126 192 aa1.99□□□□□ -2.09
TMCC1-208ENST00000508869 C4orf26Q17RF5 130 aa1.99□□□□□ -2.09
TMCC1-208ENST00000508869 SPANXN1Q5VSR9 72 aa1.99□□□□□ -2.09
TMCC1-208ENST00000508869 SREK1IP1Q8N9Q2 155 aaPredicted RBP1.99□□□□□ -2.09
TMCC1-208ENST00000508869 RNASE7Q9H1E1 156 aaKnown RBP1.99□□□□□ -2.09
TMCC1-208ENST00000508869 SMDT1Q9H4I9 107 aa1.99□□□□□ -2.09
TMCC1-208ENST00000508869 C6orf48Q9UBA6 75 aa1.99□□□□□ -2.09
TMCC1-208ENST00000508869 TRBV20OR9-2A0A075B6H5 130 aa1.98□□□□□ -2.09
TMCC1-208ENST00000508869 TRBV6-5A0A0K0K1A5 114 aa1.98□□□□□ -2.09
TMCC1-208ENST00000508869 CCDC160A6NGH7 325 aa1.98□□□□□ -2.09
TMCC1-208ENST00000508869 INMT-MINDY4F8WBC2 141 aa1.98□□□□□ -2.09
TMCC1-208ENST00000508869 UBE2L6O14933 153 aa1.98□□□□□ -2.09
TMCC1-208ENST00000508869 APCSP02743 223 aa1.98□□□□□ -2.09
TMCC1-208ENST00000508869 PET100P0DJ07 73 aa1.98□□□□□ -2.09
TMCC1-208ENST00000508869 CRYGAP11844 174 aa1.98□□□□□ -2.09
TMCC1-208ENST00000508869 EIF5AP63241 154 aaKnown RBP1.98□□□□□ -2.09
TMCC1-208ENST00000508869 Q5BKY6 102 aa1.98□□□□□ -2.09
TMCC1-208ENST00000508869 FAM19A5Q7Z5A7 132 aaPredicted RBP1.98□□□□□ -2.09
TMCC1-208ENST00000508869 TSKUQ8WUA8 353 aa1.98□□□□□ -2.09
TMCC1-208ENST00000508869 MRAP2Q96G30 205 aa1.98□□□□□ -2.09
TMCC1-208ENST00000508869 MARVELD1Q9BSK0 173 aa1.98□□□□□ -2.09
TMCC1-208ENST00000508869 CCDC32Q9BV29 185 aa1.98□□□□□ -2.09
TMCC1-208ENST00000508869 MAP1LC3B2A6NCE7 125 aa1.97□□□□□ -2.09
TMCC1-208ENST00000508869 SDHAF1A6NFY7 115 aa1.97□□□□□ -2.09
TMCC1-208ENST00000508869 COX7A2LO14548 114 aa1.97□□□□□ -2.09
TMCC1-208ENST00000508869 SMIM17P0DL12 118 aa1.97□□□□□ -2.09
TMCC1-208ENST00000508869 AKR1C3P42330 323 aa1.97□□□□□ -2.09
TMCC1-208ENST00000508869 POLR2KP53803 58 aaKnown RBP1.97□□□□□ -2.09
TMCC1-208ENST00000508869 FOXA3P55318 350 aaPredicted RBP1.97□□□□□ -2.09
TMCC1-208ENST00000508869 UBE2G1P62253 170 aa1.97□□□□□ -2.09
TMCC1-208ENST00000508869 SPAG11BQ08648 103 aa1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms