RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 CSN1S1P47710 185 aa1.33□□□□□ -2.2
TOPBP1-206ENST00000508524 NKX2-5P52952 324 aaPredicted RBP1.33□□□□□ -2.2
TOPBP1-206ENST00000508524 UBE2L3P68036 154 aaKnown RBP1.33□□□□□ -2.2
TOPBP1-206ENST00000508524 PRLHP81277 87 aa1.33□□□□□ -2.2
TOPBP1-206ENST00000508524 ATP6V1FQ16864 119 aa1.33□□□□□ -2.2
TOPBP1-206ENST00000508524 SPAG11AQ6PDA7 123 aa1.33□□□□□ -2.2
TOPBP1-206ENST00000508524 TMEM229BQ8NBD8 167 aa1.33□□□□□ -2.2
TOPBP1-206ENST00000508524 OR2D3Q8NGH3 330 aa1.33□□□□□ -2.2
TOPBP1-206ENST00000508524 SPRR2FQ96RM1 72 aa1.33□□□□□ -2.2
TOPBP1-206ENST00000508524 PFDN5Q99471 154 aa1.33□□□□□ -2.2
TOPBP1-206ENST00000508524 NMES1Q9C002 83 aa1.33□□□□□ -2.2
TOPBP1-206ENST00000508524 C11orf1Q9H5F2 150 aa1.33□□□□□ -2.2
TOPBP1-206ENST00000508524 C22orf24Q9Y442 160 aa1.33□□□□□ -2.2
TOPBP1-206ENST00000508524 V9GYY9 64 aa1.33□□□□□ -2.2
TOPBP1-206ENST00000508524 ANKRD20A5PA0PJZ0 165 aa1.32□□□□□ -2.2
TOPBP1-206ENST00000508524 B4DEV8 164 aa1.32□□□□□ -2.2
TOPBP1-206ENST00000508524 NUPR1O60356 82 aa1.32□□□□□ -2.2
TOPBP1-206ENST00000508524 SH2D1AO60880 128 aa1.32□□□□□ -2.2
TOPBP1-206ENST00000508524 CXorf1O96002 111 aa1.32□□□□□ -2.2
TOPBP1-206ENST00000508524 TMBIM6P55061 237 aa1.32□□□□□ -2.2
TOPBP1-206ENST00000508524 SPAG11BQ08648 103 aa1.32□□□□□ -2.2
TOPBP1-206ENST00000508524 PPP1R1AQ13522 171 aa1.32□□□□□ -2.2
TOPBP1-206ENST00000508524 TAL2Q16559 108 aa1.32□□□□□ -2.2
TOPBP1-206ENST00000508524 TMEM97Q5BJF2 176 aa1.32□□□□□ -2.2
TOPBP1-206ENST00000508524 FAM19A1Q7Z5A9 133 aa1.32□□□□□ -2.2
TOPBP1-206ENST00000508524 PRNTQ86SH4 94 aa1.32□□□□□ -2.2
TOPBP1-206ENST00000508524 C5orf38Q86SI9 138 aa1.32□□□□□ -2.2
TOPBP1-206ENST00000508524 C12orf45Q8N5I9 185 aaPredicted RBP1.32□□□□□ -2.2
TOPBP1-206ENST00000508524 PLEKHB2Q96CS7 222 aa1.32□□□□□ -2.2
TOPBP1-206ENST00000508524 OTORQ9NRC9 128 aa1.32□□□□□ -2.2
TOPBP1-206ENST00000508524 SCN3BQ9NY72 215 aa1.32□□□□□ -2.2
TOPBP1-206ENST00000508524 MRPL35Q9NZE8 188 aaKnown RBP1.32□□□□□ -2.2
TOPBP1-206ENST00000508524 TRAPPC1Q9Y5R8 145 aa1.32□□□□□ -2.2
TOPBP1-206ENST00000508524 A0A1B0GW15 77 aa1.31□□□□□ -2.2
TOPBP1-206ENST00000508524 IGSF23A1L1A6 192 aa1.31□□□□□ -2.2
TOPBP1-206ENST00000508524 A6NN06 94 aa1.31□□□□□ -2.2
TOPBP1-206ENST00000508524 APOA1P02647 267 aa1.31□□□□□ -2.2
TOPBP1-206ENST00000508524 TCRAP04437 139 aa1.31□□□□□ -2.2
TOPBP1-206ENST00000508524 RPL37P61927 97 aaKnown RBP1.31□□□□□ -2.2
TOPBP1-206ENST00000508524 BAXQ07812 192 aa1.31□□□□□ -2.2
TOPBP1-206ENST00000508524 C2orf82Q6UX34 121 aa1.31□□□□□ -2.2
TOPBP1-206ENST00000508524 CLVS1Q8IUQ0 354 aaPredicted RBP1.31□□□□□ -2.2
TOPBP1-206ENST00000508524 ZFP82Q8N141 532 aa1.31□□□□□ -2.2
TOPBP1-206ENST00000508524 PACRGLQ8N7B6 248 aa1.31□□□□□ -2.2
TOPBP1-206ENST00000508524 DYNC2LI1Q8TCX1 351 aa1.31□□□□□ -2.2
TOPBP1-206ENST00000508524 GGACTQ9BVM4 153 aa1.31□□□□□ -2.2
TOPBP1-206ENST00000508524 NPCDR1Q9BY65 106 aa1.31□□□□□ -2.2
TOPBP1-206ENST00000508524 MED28Q9H204 178 aa1.31□□□□□ -2.2
TOPBP1-206ENST00000508524 XAGE1AQ9HD64 81 aa1.31□□□□□ -2.2
TOPBP1-206ENST00000508524 UQCC1Q9NVA1 299 aa1.31□□□□□ -2.2
TOPBP1-206ENST00000508524 TPRKBQ9Y3C4 175 aa1.31□□□□□ -2.2
TOPBP1-206ENST00000508524 A0A1B0GU33 70 aa1.3□□□□□ -2.2
TOPBP1-206ENST00000508524 RAB19A4D1S5 217 aa1.3□□□□□ -2.2
TOPBP1-206ENST00000508524 G3V3Q6 166 aa1.3□□□□□ -2.2
TOPBP1-206ENST00000508524 COX7A2LO14548 114 aa1.3□□□□□ -2.2
TOPBP1-206ENST00000508524 UBE2L6O14933 153 aa1.3□□□□□ -2.2
TOPBP1-206ENST00000508524 HMGB3O15347 200 aaKnown RBP1.3□□□□□ -2.2
TOPBP1-206ENST00000508524 SPINK1P00995 79 aa1.3□□□□□ -2.2
TOPBP1-206ENST00000508524 MT1BP07438 61 aa1.3□□□□□ -2.2
TOPBP1-206ENST00000508524 TPT1P13693 172 aaKnown RBP1.3□□□□□ -2.2
TOPBP1-206ENST00000508524 AQP4P55087 323 aa1.3□□□□□ -2.2
TOPBP1-206ENST00000508524 DEFA1P59665 94 aa1.3□□□□□ -2.2
TOPBP1-206ENST00000508524 GABARAPL2P60520 117 aa1.3□□□□□ -2.2
TOPBP1-206ENST00000508524 UBE2G2P60604 165 aa1.3□□□□□ -2.2
TOPBP1-206ENST00000508524 LSM3P62310 102 aaKnown RBP1.3□□□□□ -2.2
TOPBP1-206ENST00000508524 SPRR4Q96PI1 79 aa1.3□□□□□ -2.2
TOPBP1-206ENST00000508524 RSL24D1Q9UHA3 163 aaKnown RBP1.3□□□□□ -2.2
TOPBP1-206ENST00000508524 ARL2-SNX15V9GYD0 113 aa1.3□□□□□ -2.2
TOPBP1-206ENST00000508524 FAM240AA0A1B0GVK7 77 aa1.29□□□□□ -2.2
TOPBP1-206ENST00000508524 FABP5P3A8MUU1 101 aa1.29□□□□□ -2.2
TOPBP1-206ENST00000508524 DISC1C4P0D8 188 aa1.29□□□□□ -2.2
TOPBP1-206ENST00000508524 TMEM238C9JI98 176 aa1.29□□□□□ -2.2
TOPBP1-206ENST00000508524 SLC25A20O43772 301 aa1.29□□□□□ -2.2
TOPBP1-206ENST00000508524 SFT2D2O95562 160 aa1.29□□□□□ -2.2
TOPBP1-206ENST00000508524 MGPP08493 103 aa1.29□□□□□ -2.2
TOPBP1-206ENST00000508524 OR5AL1P0C617 328 aa1.29□□□□□ -2.2
TOPBP1-206ENST00000508524 AKAIN1P0CW23 69 aa1.29□□□□□ -2.2
TOPBP1-206ENST00000508524 TAS2R30P59541 319 aa1.29□□□□□ -2.2
TOPBP1-206ENST00000508524 COTL1Q14019 142 aa1.29□□□□□ -2.2
TOPBP1-206ENST00000508524 TMEM128Q5BJH2 165 aa1.29□□□□□ -2.2
TOPBP1-206ENST00000508524 SLC7A5P1Q8MH63 180 aa1.29□□□□□ -2.2
TOPBP1-206ENST00000508524 ORAOV1Q8WV07 137 aa1.29□□□□□ -2.2
TOPBP1-206ENST00000508524 SMIM4Q8WVI0 70 aa1.29□□□□□ -2.2
TOPBP1-206ENST00000508524 IMMP2LQ96T52 175 aa1.29□□□□□ -2.2
TOPBP1-206ENST00000508524 CDC42SE2Q9NRR3 84 aa1.29□□□□□ -2.2
TOPBP1-206ENST00000508524 LYRM2Q9NU23 88 aaPredicted RBP1.29□□□□□ -2.2
TOPBP1-206ENST00000508524 GSKIPQ9P0R6 139 aa1.29□□□□□ -2.2
TOPBP1-206ENST00000508524 AHNAKQ09666 5890 aaKnown RBP1.28□□□□□ -2.2
TOPBP1-206ENST00000508524 A0A0B4J2C4 111 aa1.28□□□□□ -2.2
TOPBP1-206ENST00000508524 SMIM31A0A1B0GVY4 71 aa1.28□□□□□ -2.2
TOPBP1-206ENST00000508524 NDUFA1O15239 70 aa1.28□□□□□ -2.2
TOPBP1-206ENST00000508524 FOXA3P55318 350 aaPredicted RBP1.28□□□□□ -2.2
TOPBP1-206ENST00000508524 NCS1P62166 190 aa1.28□□□□□ -2.2
TOPBP1-206ENST00000508524 VAMP3Q15836 100 aa1.28□□□□□ -2.2
TOPBP1-206ENST00000508524 IAH1Q2TAA2 248 aaPredicted RBP1.28□□□□□ -2.2
TOPBP1-206ENST00000508524 RASL11AQ6T310 242 aa1.28□□□□□ -2.2
TOPBP1-206ENST00000508524 SREK1IP1Q8N9Q2 155 aaPredicted RBP1.28□□□□□ -2.2
TOPBP1-206ENST00000508524 C5orf17Q8NAS9 161 aa1.28□□□□□ -2.2
TOPBP1-206ENST00000508524 RPL39LQ96EH5 51 aaKnown RBP1.28□□□□□ -2.2
TOPBP1-206ENST00000508524 PACRGQ96M98 296 aaPredicted RBP1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms