RNA–Protein interactions for RNA: ENST00000508473.5

SRPK1-210, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 858 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-210ENST00000508473 LINC00469Q8N7U9 141 aa15.03■□□□□ -0
SRPK1-210ENST00000508473 YPEL4Q96NS1 127 aa15.03■□□□□ -0
SRPK1-210ENST00000508473 TRBV30A0A0K0K1B3 111 aa15.02■□□□□ -0
SRPK1-210ENST00000508473 LINC00614P0C842 121 aa15.02■□□□□ -0
SRPK1-210ENST00000508473 CKS1BP61024 79 aa15.02■□□□□ -0
SRPK1-210ENST00000508473 C6orf226Q5I0X4 101 aa15.02■□□□□ -0
SRPK1-210ENST00000508473 A0A096LNJ9 63 aa15.01□□□□□ -0.01
SRPK1-210ENST00000508473 PMVKQ15126 192 aa15.01□□□□□ -0.01
SRPK1-210ENST00000508473 PMCHL1Q16048 86 aa15.01□□□□□ -0.01
SRPK1-210ENST00000508473 TINCRA0A1B0GVN0 87 aa15□□□□□ -0.01
SRPK1-210ENST00000508473 FAM168BA1KXE4 195 aa15□□□□□ -0.01
SRPK1-210ENST00000508473 PHF5AQ7RTV0 110 aaKnown RBP15□□□□□ -0.01
SRPK1-210ENST00000508473 Q8IZM0 81 aa15□□□□□ -0.01
SRPK1-210ENST00000508473 CBLN2Q8IUK8 224 aa14.99□□□□□ -0.01
SRPK1-210ENST00000508473 SLC7A5P1Q8MH63 180 aa14.98□□□□□ -0.01
SRPK1-210ENST00000508473 HBDP02042 147 aa14.97□□□□□ -0.01
SRPK1-210ENST00000508473 NDUFA6P56556 154 aa14.97□□□□□ -0.01
SRPK1-210ENST00000508473 SMIM1B2RUZ4 78 aa14.96□□□□□ -0.01
SRPK1-210ENST00000508473 NDUFC2-KCTD14E9PQ53 114 aa14.96□□□□□ -0.01
SRPK1-210ENST00000508473 FAM19A5Q7Z5A7 132 aaPredicted RBP14.96□□□□□ -0.01
SRPK1-210ENST00000508473 IGLV5-45A0A087WSX0 123 aa14.95□□□□□ -0.02
SRPK1-210ENST00000508473 RAB5BP61020 215 aa14.95□□□□□ -0.02
SRPK1-210ENST00000508473 SPINK8P0C7L1 97 aa14.94□□□□□ -0.02
SRPK1-210ENST00000508473 PDZD11Q5EBL8 140 aa14.93□□□□□ -0.02
SRPK1-210ENST00000508473 C9orf129Q5T035 196 aaKnown RBP14.92□□□□□ -0.02
SRPK1-210ENST00000508473 COX7B2Q8TF08 81 aa14.92□□□□□ -0.02
SRPK1-210ENST00000508473 F8VRH5 84 aa14.91□□□□□ -0.02
SRPK1-210ENST00000508473 KRTAP7-1Q8IUC3 87 aa14.91□□□□□ -0.02
SRPK1-210ENST00000508473 PSORS1C2Q9UIG4 136 aa14.91□□□□□ -0.02
SRPK1-210ENST00000508473 IGLC3P0DOY3 106 aa14.9□□□□□ -0.02
SRPK1-210ENST00000508473 CXCL5P42830 114 aa14.89□□□□□ -0.03
SRPK1-210ENST00000508473 H3BRM9 83 aa14.88□□□□□ -0.03
SRPK1-210ENST00000508473 ATP5LO75964 103 aa14.88□□□□□ -0.03
SRPK1-210ENST00000508473 C1orf137Q5JT78 98 aa14.87□□□□□ -0.03
SRPK1-210ENST00000508473 SPINK6Q6UWN8 80 aa14.87□□□□□ -0.03
SRPK1-210ENST00000508473 BAGE3Q86Y29 109 aa14.87□□□□□ -0.03
SRPK1-210ENST00000508473 KRTAP11-1Q8IUC1 163 aa14.87□□□□□ -0.03
SRPK1-210ENST00000508473 XAGE1AQ9HD64 81 aa14.87□□□□□ -0.03
SRPK1-210ENST00000508473 M0QXV9 152 aa14.86□□□□□ -0.03
SRPK1-210ENST00000508473 MT1HL1P0DM35 61 aa14.86□□□□□ -0.03
SRPK1-210ENST00000508473 SRSF9Q13242 221 aaKnown RBP eCLIP14.86□□□□□ -0.03
SRPK1-210ENST00000508473 ZNF22P17026 224 aaPredicted RBP14.85□□□□□ -0.03
SRPK1-210ENST00000508473 CHCHD1Q96BP2 118 aaKnown RBP14.85□□□□□ -0.03
SRPK1-210ENST00000508473 TRGC2P03986 189 aa14.84□□□□□ -0.03
SRPK1-210ENST00000508473 SERTAD4-AS1Q5TG53 156 aa14.83□□□□□ -0.04
SRPK1-210ENST00000508473 UBE2BP63146 152 aa14.82□□□□□ -0.04
SRPK1-210ENST00000508473 C11orf86A6NJI1 115 aa14.81□□□□□ -0.04
SRPK1-210ENST00000508473 IGLV5-39A0A0G2JS06 123 aa14.79□□□□□ -0.04
SRPK1-210ENST00000508473 TMEM170BQ5T4T1 132 aa14.79□□□□□ -0.04
SRPK1-210ENST00000508473 REG3GQ6UW15 175 aa14.79□□□□□ -0.04
SRPK1-210ENST00000508473 FAM19A2Q8N3H0 131 aa14.79□□□□□ -0.04
SRPK1-210ENST00000508473 CHTOPQ9Y3Y2 248 aaKnown RBP14.79□□□□□ -0.04
SRPK1-210ENST00000508473 HSBP1O75506 76 aa14.78□□□□□ -0.04
SRPK1-210ENST00000508473 IFI27L1Q96BM0 104 aa14.78□□□□□ -0.04
SRPK1-210ENST00000508473 LINC01600Q96MT4 127 aa14.78□□□□□ -0.04
SRPK1-210ENST00000508473 IGLV7-43P04211 117 aa14.77□□□□□ -0.05
SRPK1-210ENST00000508473 C22orf24Q9Y442 160 aa14.77□□□□□ -0.05
SRPK1-210ENST00000508473 COLCA2A8K830 154 aa14.74□□□□□ -0.05
SRPK1-210ENST00000508473 TRAV12-1A0A0B4J245 112 aa14.72□□□□□ -0.05
SRPK1-210ENST00000508473 SERF1AO75920 110 aa14.72□□□□□ -0.05
SRPK1-210ENST00000508473 PFN2P35080 140 aa14.72□□□□□ -0.05
SRPK1-210ENST00000508473 TNXBP22105 4242 aa14.71□□□□□ -0.05
SRPK1-210ENST00000508473 LINC00310P59036 64 aa14.71□□□□□ -0.05
SRPK1-210ENST00000508473 LBHQ53QV2 105 aaPredicted RBP14.71□□□□□ -0.05
SRPK1-210ENST00000508473 ZNF625Q96I27 306 aaPredicted RBP14.71□□□□□ -0.05
SRPK1-210ENST00000508473 H0Y8G0 127 aa14.69□□□□□ -0.06
SRPK1-210ENST00000508473 MRPL55Q7Z7F7 128 aaKnown RBP14.69□□□□□ -0.06
SRPK1-210ENST00000508473 DIRC1Q969H9 104 aa14.68□□□□□ -0.06
SRPK1-210ENST00000508473 ERG28Q9UKR5 140 aa14.68□□□□□ -0.06
SRPK1-210ENST00000508473 TMEM223A0PJW6 202 aa14.67□□□□□ -0.06
SRPK1-210ENST00000508473 NUPR1O60356 82 aa14.67□□□□□ -0.06
SRPK1-210ENST00000508473 SCO1O75880 301 aa14.67□□□□□ -0.06
SRPK1-210ENST00000508473 ODF1Q14990 250 aa14.67□□□□□ -0.06
SRPK1-210ENST00000508473 TP73-AS1Q9UF72 201 aa14.67□□□□□ -0.06
SRPK1-210ENST00000508473 LEPROTL1O95214 131 aa14.66□□□□□ -0.06
SRPK1-210ENST00000508473 PLA2G2DQ9UNK4 145 aa14.66□□□□□ -0.06
SRPK1-210ENST00000508473 GAGE10A6NGK3 116 aa14.65□□□□□ -0.06
SRPK1-210ENST00000508473 KRTAP10-8P60410 259 aa14.65□□□□□ -0.06
SRPK1-210ENST00000508473 HMCN2Q8NDA2 5059 aa14.65□□□□□ -0.06
SRPK1-210ENST00000508473 LINC00167Q96N53 147 aa14.64□□□□□ -0.07
SRPK1-210ENST00000508473 RPL37AP8A6NKH3 93 aa14.63□□□□□ -0.07
SRPK1-210ENST00000508473 H0Y9J4 135 aa14.63□□□□□ -0.07
SRPK1-210ENST00000508473 FABP4P15090 132 aa14.62□□□□□ -0.07
SRPK1-210ENST00000508473 NKAPP1Q8N9T2 125 aa14.62□□□□□ -0.07
SRPK1-210ENST00000508473 SND1-IT1Q9HBX3 110 aa14.62□□□□□ -0.07
SRPK1-210ENST00000508473 IGLV5-37A0A075B6J1 123 aa14.6□□□□□ -0.07
SRPK1-210ENST00000508473 COX17Q14061 63 aa14.6□□□□□ -0.07
SRPK1-210ENST00000508473 SFTA2Q6UW10 78 aa14.6□□□□□ -0.07
SRPK1-210ENST00000508473 HSPB8Q9UJY1 196 aa14.59□□□□□ -0.07
SRPK1-210ENST00000508473 A0A0U1RRA0 63 aa14.58□□□□□ -0.08
SRPK1-210ENST00000508473 ZNF861PO60384 105 aa14.57□□□□□ -0.08
SRPK1-210ENST00000508473 LINC00158P58513 81 aa14.57□□□□□ -0.08
SRPK1-210ENST00000508473 PRR26Q8N8Z3 221 aa14.56□□□□□ -0.08
SRPK1-210ENST00000508473 VPREB1P12018 145 aa14.55□□□□□ -0.08
SRPK1-210ENST00000508473 PMCHL2Q9BQD1 86 aa14.55□□□□□ -0.08
SRPK1-210ENST00000508473 BCE1O60756 84 aa14.54□□□□□ -0.08
SRPK1-210ENST00000508473 Q8NDZ9 215 aa14.53□□□□□ -0.08
SRPK1-210ENST00000508473 IGKV2-28A0A075B6P5 120 aa14.52□□□□□ -0.09
SRPK1-210ENST00000508473 HIST1H2BKO60814 126 aa14.52□□□□□ -0.09
SRPK1-210ENST00000508473 IGKV2D-28P01615 120 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms