RNA–Protein interactions for RNA: ENST00000508258.1

SMN2-208, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 5

Gene SMN2, Length 211 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-208ENST00000508258 PSMG4Q5JS54 123 aa0.05□□□□□ -2.4
SMN2-208ENST00000508258 FDCSPQ8NFU4 85 aa0.05□□□□□ -2.4
SMN2-208ENST00000508258 SETBP1Q9Y6X0 1596 aa0.05□□□□□ -2.4
SMN2-208ENST00000508258 F8P00451 2351 aa0.05□□□□□ -2.4
SMN2-208ENST00000508258 CLTCQ00610 1675 aaKnown RBP0.05□□□□□ -2.4
SMN2-208ENST00000508258 EDC4Q6P2E9 1401 aaKnown RBP0.04□□□□□ -2.4
SMN2-208ENST00000508258 KNDC1Q76NI1 1749 aa0.04□□□□□ -2.4
SMN2-208ENST00000508258 FANCAO15360 1455 aa0.04□□□□□ -2.4
SMN2-208ENST00000508258 SPRR1BP22528 89 aa0.04□□□□□ -2.4
SMN2-208ENST00000508258 PKIAP61925 76 aa0.04□□□□□ -2.4
SMN2-208ENST00000508258 COL5A1-AS1Q5SY13 56 aa0.04□□□□□ -2.4
SMN2-208ENST00000508258 VAMP8Q9BV40 100 aa0.04□□□□□ -2.4
SMN2-208ENST00000508258 ZNF292O60281 2723 aa0.04□□□□□ -2.4
SMN2-208ENST00000508258 TSC2P49815 1807 aa0.03□□□□□ -2.4
SMN2-208ENST00000508258 CELSR1Q9NYQ6 3014 aa0.03□□□□□ -2.4
SMN2-208ENST00000508258 SLIT1O75093 1534 aa0.03□□□□□ -2.4
SMN2-208ENST00000508258 NCOR2Q9Y618 2525 aa0.03□□□□□ -2.4
SMN2-208ENST00000508258 A0A1B0GU69 56 aa0.03□□□□□ -2.4
SMN2-208ENST00000508258 H0Y9P7 68 aa0.03□□□□□ -2.4
SMN2-208ENST00000508258 H3BQF6 201 aa0.03□□□□□ -2.4
SMN2-208ENST00000508258 C6orf201Q7Z4U5 140 aa0.03□□□□□ -2.4
SMN2-208ENST00000508258 DEFB107AQ8IZN7 70 aa0.03□□□□□ -2.4
SMN2-208ENST00000508258 UNC79Q9P2D8 2635 aa0.03□□□□□ -2.4
SMN2-208ENST00000508258 SPTBN2O15020 2390 aa0.03□□□□□ -2.41
SMN2-208ENST00000508258 C2CD3Q4AC94 2353 aa0.03□□□□□ -2.41
SMN2-208ENST00000508258 IQSEC2Q5JU85 1478 aa0.03□□□□□ -2.41
SMN2-208ENST00000508258 C5P01031 1676 aa0.02□□□□□ -2.41
SMN2-208ENST00000508258 MON2Q7Z3U7 1717 aa0.02□□□□□ -2.41
SMN2-208ENST00000508258 KIAA1551Q9HCM1 1747 aa0.02□□□□□ -2.41
SMN2-208ENST00000508258 PTPRZ1P23471 2315 aaPredicted RBP0.02□□□□□ -2.41
SMN2-208ENST00000508258 ARMS2P0C7Q2 107 aa0.02□□□□□ -2.41
SMN2-208ENST00000508258 FAUP35544 74 aaKnown RBP0.02□□□□□ -2.41
SMN2-208ENST00000508258 AHCTF1Q8WYP5 2266 aa0.02□□□□□ -2.41
SMN2-208ENST00000508258 CUX1P39880 1505 aa0.02□□□□□ -2.41
SMN2-208ENST00000508258 TTC37Q6PGP7 1564 aa0.02□□□□□ -2.41
SMN2-208ENST00000508258 HIVEP3Q5T1R4 2406 aa0.02□□□□□ -2.41
SMN2-208ENST00000508258 MYO3AQ8NEV4 1616 aa0.02□□□□□ -2.41
SMN2-208ENST00000508258 IGF2RP11717 2491 aa0.02□□□□□ -2.41
SMN2-208ENST00000508258 TENM4Q6N022 2769 aa0.01□□□□□ -2.41
SMN2-208ENST00000508258 PIEZO2Q9H5I5 2752 aa0.01□□□□□ -2.41
SMN2-208ENST00000508258 USF3Q68DE3 2245 aa0.01□□□□□ -2.41
SMN2-208ENST00000508258 UQCRHLA0A096LP55 91 aa0.01□□□□□ -2.41
SMN2-208ENST00000508258 HMGN3Q15651 99 aa0.01□□□□□ -2.41
SMN2-208ENST00000508258 VWFP04275 2813 aa0.01□□□□□ -2.41
SMN2-208ENST00000508258 CEP162Q5TB80 1403 aa0.01□□□□□ -2.41
SMN2-208ENST00000508258 HUWE1Q7Z6Z7 4374 aaKnown RBP0.01□□□□□ -2.41
SMN2-208ENST00000508258 ATP10BO94823 1461 aa0.01□□□□□ -2.41
SMN2-208ENST00000508258 NKTRP30414 1462 aaKnown RBP0.01□□□□□ -2.41
SMN2-208ENST00000508258 MYCBP2O75592 4640 aa0.01□□□□□ -2.41
SMN2-208ENST00000508258 SAMD9Q5K651 1589 aa0.01□□□□□ -2.41
SMN2-208ENST00000508258 HMCN2Q8NDA2 5059 aa0.01□□□□□ -2.41
SMN2-208ENST00000508258 LRRC37AA6NMS7 1700 aa0.01□□□□□ -2.41
SMN2-208ENST00000508258 F8WEM9 126 aa0□□□□□ -2.41
SMN2-208ENST00000508258 PRM1P04553 51 aa0□□□□□ -2.41
SMN2-208ENST00000508258 ETDBQ3ZM63 59 aa0□□□□□ -2.41
SMN2-208ENST00000508258 CCDC141Q6ZP82 1450 aa0□□□□□ -2.41
SMN2-208ENST00000508258 ZNF720Q7Z2F6 126 aa0□□□□□ -2.41
SMN2-208ENST00000508258 UBR1Q8IWV7 1749 aa0□□□□□ -2.41
SMN2-208ENST00000508258 USMG5Q96IX5 58 aa0□□□□□ -2.41
SMN2-208ENST00000508258 SPRR2GQ9BYE4 73 aa0□□□□□ -2.41
SMN2-208ENST00000508258 BAZ1AQ9NRL2 1556 aaPredicted RBP0□□□□□ -2.41
SMN2-208ENST00000508258 PSENENQ9NZ42 101 aa0□□□□□ -2.41
SMN2-208ENST00000508258 FMN2Q9NZ56 1722 aa0□□□□□ -2.41
SMN2-208ENST00000508258 HIGD1BQ9P298 99 aa0□□□□□ -2.41
SMN2-208ENST00000508258 CRYBG1Q9Y4K1 1723 aa0□□□□□ -2.41
SMN2-208ENST00000508258 PLCE1Q9P212 2302 aa-0.01□□□□□ -2.41
SMN2-208ENST00000508258 TNXBP22105 4242 aa-0.01□□□□□ -2.41
SMN2-208ENST00000508258 ALKQ9UM73 1620 aa-0.01□□□□□ -2.41
SMN2-208ENST00000508258 LPAP08519 4548 aa-0.01□□□□□ -2.41
SMN2-208ENST00000508258 IGSF10Q6WRI0 2623 aa-0.01□□□□□ -2.41
SMN2-208ENST00000508258 GYPAP02724 150 aa-0.01□□□□□ -2.41
SMN2-208ENST00000508258 COX8AP10176 69 aa-0.01□□□□□ -2.41
SMN2-208ENST00000508258 SPRR2DP22532 72 aa-0.01□□□□□ -2.41
SMN2-208ENST00000508258 GNGT1P63211 74 aa-0.01□□□□□ -2.41
SMN2-208ENST00000508258 ALKAL2Q6UX46 152 aa-0.01□□□□□ -2.41
SMN2-208ENST00000508258 C20orf78Q9BR46 151 aa-0.01□□□□□ -2.41
SMN2-208ENST00000508258 CACNA1AO00555 2505 aa-0.01□□□□□ -2.41
SMN2-208ENST00000508258 FAT2Q9NYQ8 4349 aa-0.01□□□□□ -2.41
SMN2-208ENST00000508258 COL7A1Q02388 2944 aa-0.02□□□□□ -2.41
SMN2-208ENST00000508258 DEFB105AQ8NG35 78 aa-0.02□□□□□ -2.41
SMN2-208ENST00000508258 WNK2Q9Y3S1 2297 aa-0.02□□□□□ -2.41
SMN2-208ENST00000508258 ANKRD17O75179 2603 aaKnown RBP-0.02□□□□□ -2.41
SMN2-208ENST00000508258 ABCC3O15438 1527 aa-0.03□□□□□ -2.41
SMN2-208ENST00000508258 PTPRQQ9UMZ3 2332 aa-0.03□□□□□ -2.41
SMN2-208ENST00000508258 HSPG2P98160 4391 aa-0.03□□□□□ -2.41
SMN2-208ENST00000508258 D6R8Y8 96 aa-0.03□□□□□ -2.41
SMN2-208ENST00000508258 LEPROTL1O95214 131 aa-0.03□□□□□ -2.41
SMN2-208ENST00000508258 MUSTN1Q8IVN3 82 aa-0.03□□□□□ -2.41
SMN2-208ENST00000508258 CRIPTQ9P021 101 aa-0.03□□□□□ -2.41
SMN2-208ENST00000508258 UBE2D4Q9Y2X8 147 aa-0.03□□□□□ -2.41
SMN2-208ENST00000508258 CHD6Q8TD26 2715 aa-0.03□□□□□ -2.41
SMN2-208ENST00000508258 AKAP6Q13023 2319 aa-0.03□□□□□ -2.41
SMN2-208ENST00000508258 ANKRD36A6QL64 1941 aa-0.03□□□□□ -2.41
SMN2-208ENST00000508258 PKDREJQ9NTG1 2253 aa-0.03□□□□□ -2.41
SMN2-208ENST00000508258 RGPD4Q7Z3J3 1758 aa-0.04□□□□□ -2.42
SMN2-208ENST00000508258 PKD1L3Q7Z443 1732 aa-0.04□□□□□ -2.42
SMN2-208ENST00000508258 SPINK4O60575 86 aa-0.04□□□□□ -2.42
SMN2-208ENST00000508258 HMGN2P05204 90 aaKnown RBP-0.04□□□□□ -2.42
SMN2-208ENST00000508258 IGLC2P0DOY2 106 aa-0.04□□□□□ -2.42
SMN2-208ENST00000508258 IGLC3P0DOY3 106 aa-0.04□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms