RNA–Protein interactions for RNA: ENST00000508238.5

UBE2D3-222, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-222ENST00000508238 NDUFA1O15239 70 aa4.94□□□□□ -1.62
UBE2D3-222ENST00000508238 SRSF9Q13242 221 aaKnown RBP eCLIP4.94□□□□□ -1.62
UBE2D3-222ENST00000508238 C2orf66Q6UXQ4 117 aa4.94□□□□□ -1.62
UBE2D3-222ENST00000508238 MRPL35Q9NZE8 188 aaKnown RBP4.94□□□□□ -1.62
UBE2D3-222ENST00000508238 A0A087WZ39 114 aa4.93□□□□□ -1.62
UBE2D3-222ENST00000508238 SNAPINO95295 136 aa4.93□□□□□ -1.62
UBE2D3-222ENST00000508238 PRSS2P07478 247 aa4.93□□□□□ -1.62
UBE2D3-222ENST00000508238 SPAG11BQ08648 103 aa4.93□□□□□ -1.62
UBE2D3-222ENST00000508238 GAGE2BQ13066 116 aa4.93□□□□□ -1.62
UBE2D3-222ENST00000508238 LINC00242Q5T6M2 205 aa4.93□□□□□ -1.62
UBE2D3-222ENST00000508238 SPINK6Q6UWN8 80 aa4.93□□□□□ -1.62
UBE2D3-222ENST00000508238 Q6ZRP5 223 aa4.93□□□□□ -1.62
UBE2D3-222ENST00000508238 COMMD7Q86VX2 200 aa4.93□□□□□ -1.62
UBE2D3-222ENST00000508238 PACRGQ96M98 296 aaPredicted RBP4.93□□□□□ -1.62
UBE2D3-222ENST00000508238 LINC01600Q96MT4 127 aa4.93□□□□□ -1.62
UBE2D3-222ENST00000508238 RPS10P5Q9NQ39 176 aa4.93□□□□□ -1.62
UBE2D3-222ENST00000508238 SMCO4Q9NRQ5 59 aa4.93□□□□□ -1.62
UBE2D3-222ENST00000508238 HMCN2Q8NDA2 5059 aa4.93□□□□□ -1.62
UBE2D3-222ENST00000508238 IGLV4-3A0A075B6K6 122 aa4.92□□□□□ -1.62
UBE2D3-222ENST00000508238 A0A1W2PNN7 141 aa4.92□□□□□ -1.62
UBE2D3-222ENST00000508238 TLX1NBP0CAT3 122 aa4.92□□□□□ -1.62
UBE2D3-222ENST00000508238 RAB5BP61020 215 aa4.92□□□□□ -1.62
UBE2D3-222ENST00000508238 HERVK_113P63121 156 aa4.92□□□□□ -1.62
UBE2D3-222ENST00000508238 IFITM2Q01629 132 aa4.92□□□□□ -1.62
UBE2D3-222ENST00000508238 KIAA0087Q14695 138 aa4.92□□□□□ -1.62
UBE2D3-222ENST00000508238 C9orf116Q5BN46 136 aaPredicted RBP4.92□□□□□ -1.62
UBE2D3-222ENST00000508238 C6orf226Q5I0X4 101 aa4.92□□□□□ -1.62
UBE2D3-222ENST00000508238 ERASQ7Z444 233 aa4.92□□□□□ -1.62
UBE2D3-222ENST00000508238 SVBPQ8N300 66 aa4.92□□□□□ -1.62
UBE2D3-222ENST00000508238 ORAOV1Q8WV07 137 aa4.92□□□□□ -1.62
UBE2D3-222ENST00000508238 TIMM17AQ99595 171 aa4.92□□□□□ -1.62
UBE2D3-222ENST00000508238 GEMIN7Q9H840 131 aaKnown RBP4.92□□□□□ -1.62
UBE2D3-222ENST00000508238 TNXBP22105 4242 aa4.92□□□□□ -1.62
UBE2D3-222ENST00000508238 TRBV30A0A0K0K1B3 111 aa4.91□□□□□ -1.62
UBE2D3-222ENST00000508238 IGIPA6NJ69 53 aa4.91□□□□□ -1.62
UBE2D3-222ENST00000508238 UBE2D1P51668 147 aa4.91□□□□□ -1.62
UBE2D3-222ENST00000508238 CKS1BP61024 79 aa4.91□□□□□ -1.62
UBE2D3-222ENST00000508238 FABP9Q0Z7S8 132 aa4.91□□□□□ -1.62
UBE2D3-222ENST00000508238 C10orf91Q5T1B1 145 aa4.91□□□□□ -1.62
UBE2D3-222ENST00000508238 C10orf25Q5T742 122 aa4.91□□□□□ -1.62
UBE2D3-222ENST00000508238 FA2HQ7L5A8 372 aa4.91□□□□□ -1.62
UBE2D3-222ENST00000508238 TOMM6Q96B49 74 aa4.91□□□□□ -1.62
UBE2D3-222ENST00000508238 SCGB3A1Q96QR1 104 aa4.91□□□□□ -1.62
UBE2D3-222ENST00000508238 AMELXQ99217 191 aa4.91□□□□□ -1.62
UBE2D3-222ENST00000508238 CARHSP1Q9Y2V2 147 aaKnown RBP4.91□□□□□ -1.62
UBE2D3-222ENST00000508238 A0A0J9YXV3 536 aa4.9□□□□□ -1.63
UBE2D3-222ENST00000508238 KRTAP10-8P60410 259 aa4.9□□□□□ -1.63
UBE2D3-222ENST00000508238 REG3GQ6UW15 175 aa4.9□□□□□ -1.63
UBE2D3-222ENST00000508238 UNQ6190/PRO20217Q6UXQ8 127 aa4.9□□□□□ -1.63
UBE2D3-222ENST00000508238 FAM19A3Q7Z5A8 133 aa4.9□□□□□ -1.63
UBE2D3-222ENST00000508238 C6orf48Q9UBA6 75 aa4.9□□□□□ -1.63
UBE2D3-222ENST00000508238 APOC3P02656 99 aa4.89□□□□□ -1.63
UBE2D3-222ENST00000508238 ADCYAP1P18509 176 aa4.89□□□□□ -1.63
UBE2D3-222ENST00000508238 CXCL5P42830 114 aa4.89□□□□□ -1.63
UBE2D3-222ENST00000508238 RPL18AQ02543 176 aaKnown RBP4.89□□□□□ -1.63
UBE2D3-222ENST00000508238 KIAA1644Q3SXP7 199 aa4.89□□□□□ -1.63
UBE2D3-222ENST00000508238 LINC00173Q6ZV60 143 aa4.89□□□□□ -1.63
UBE2D3-222ENST00000508238 ALKBH7Q9BT30 221 aaPredicted RBP4.89□□□□□ -1.63
UBE2D3-222ENST00000508238 TRAPPC1Q9Y5R8 145 aa4.89□□□□□ -1.63
UBE2D3-222ENST00000508238 A0A0A0MQY5 61 aa4.88□□□□□ -1.63
UBE2D3-222ENST00000508238 LINC01546A6NGU7 62 aa4.88□□□□□ -1.63
UBE2D3-222ENST00000508238 H3BRM9 83 aa4.88□□□□□ -1.63
UBE2D3-222ENST00000508238 LINC00614P0C842 121 aa4.88□□□□□ -1.63
UBE2D3-222ENST00000508238 PSORS1C2Q9UIG4 136 aa4.88□□□□□ -1.63
UBE2D3-222ENST00000508238 TINCRA0A1B0GVN0 87 aa4.87□□□□□ -1.63
UBE2D3-222ENST00000508238 NDUFC2-KCTD14E9PQ53 114 aa4.87□□□□□ -1.63
UBE2D3-222ENST00000508238 PMVKQ15126 192 aa4.87□□□□□ -1.63
UBE2D3-222ENST00000508238 PHF5AQ7RTV0 110 aaKnown RBP4.87□□□□□ -1.63
UBE2D3-222ENST00000508238 Q8IZM0 81 aa4.87□□□□□ -1.63
UBE2D3-222ENST00000508238 FAM168BA1KXE4 195 aa4.86□□□□□ -1.63
UBE2D3-222ENST00000508238 ATP5LO75964 103 aa4.86□□□□□ -1.63
UBE2D3-222ENST00000508238 LBHQ53QV2 105 aaPredicted RBP4.86□□□□□ -1.63
UBE2D3-222ENST00000508238 PDZD11Q5EBL8 140 aa4.86□□□□□ -1.63
UBE2D3-222ENST00000508238 ZC2HC1BQ5TFG8 222 aa4.86□□□□□ -1.63
UBE2D3-222ENST00000508238 SFTA2Q6UW10 78 aa4.86□□□□□ -1.63
UBE2D3-222ENST00000508238 C2orf82Q6UX34 121 aa4.86□□□□□ -1.63
UBE2D3-222ENST00000508238 KRTAP7-1Q8IUC3 87 aa4.86□□□□□ -1.63
UBE2D3-222ENST00000508238 CST9LQ9H4G1 147 aa4.86□□□□□ -1.63
UBE2D3-222ENST00000508238 TOMM7Q9P0U1 55 aa4.86□□□□□ -1.63
UBE2D3-222ENST00000508238 UBR4Q5T4S7 5183 aa4.86□□□□□ -1.63
UBE2D3-222ENST00000508238 F8VRH5 84 aa4.85□□□□□ -1.63
UBE2D3-222ENST00000508238 IGLV7-43P04211 117 aa4.85□□□□□ -1.63
UBE2D3-222ENST00000508238 GAGE2EQ4V326 116 aa4.85□□□□□ -1.63
UBE2D3-222ENST00000508238 C1orf137Q5JT78 98 aa4.85□□□□□ -1.63
UBE2D3-222ENST00000508238 LINC00469Q8N7U9 141 aa4.85□□□□□ -1.63
UBE2D3-222ENST00000508238 GAGE2DQ9UEU5 116 aa4.85□□□□□ -1.63
UBE2D3-222ENST00000508238 CDKN2A-AS1Q9UH64 79 aa4.85□□□□□ -1.63
UBE2D3-222ENST00000508238 IGLV5-45A0A087WSX0 123 aa4.84□□□□□ -1.63
UBE2D3-222ENST00000508238 NDUFA6P56556 154 aa4.84□□□□□ -1.63
UBE2D3-222ENST00000508238 C9orf129Q5T035 196 aaKnown RBP4.84□□□□□ -1.63
UBE2D3-222ENST00000508238 KRTAP11-1Q8IUC1 163 aa4.84□□□□□ -1.63
UBE2D3-222ENST00000508238 MPLKIPQ8TAP9 179 aa4.84□□□□□ -1.63
UBE2D3-222ENST00000508238 HBDP02042 147 aa4.83□□□□□ -1.64
UBE2D3-222ENST00000508238 FAM19A5Q7Z5A7 132 aaPredicted RBP4.83□□□□□ -1.64
UBE2D3-222ENST00000508238 DIRC1Q969H9 104 aa4.83□□□□□ -1.64
UBE2D3-222ENST00000508238 CHCHD1Q96BP2 118 aaKnown RBP4.83□□□□□ -1.64
UBE2D3-222ENST00000508238 LRP2P98164 4655 aa4.82□□□□□ -1.64
UBE2D3-222ENST00000508238 LINC00587B1AMM8 73 aa4.82□□□□□ -1.64
UBE2D3-222ENST00000508238 M0QXV9 152 aa4.82□□□□□ -1.64
UBE2D3-222ENST00000508238 UBE2BP63146 152 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms