RNA–Protein interactions for RNA: ENST00000508063.1

PTPN13-207, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 3

Gene PTPN13, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-207ENST00000508063 C1orf137Q5JT78 98 aa6.82□□□□□ -1.32
PTPN13-207ENST00000508063 PAPPA-AS1Q5QFB9 102 aa6.82□□□□□ -1.32
PTPN13-207ENST00000508063 C10orf25Q5T742 122 aa6.82□□□□□ -1.32
PTPN13-207ENST00000508063 C2orf66Q6UXQ4 117 aa6.82□□□□□ -1.32
PTPN13-207ENST00000508063 PACRGQ96M98 296 aaPredicted RBP6.82□□□□□ -1.32
PTPN13-207ENST00000508063 CTDSP1Q9GZU7 261 aa6.82□□□□□ -1.32
PTPN13-207ENST00000508063 NXT2Q9NPJ8 142 aaKnown RBP6.82□□□□□ -1.32
PTPN13-207ENST00000508063 C6orf48Q9UBA6 75 aa6.82□□□□□ -1.32
PTPN13-207ENST00000508063 KIAA0087Q14695 138 aa6.81□□□□□ -1.32
PTPN13-207ENST00000508063 GAGE2EQ4V326 116 aa6.81□□□□□ -1.32
PTPN13-207ENST00000508063 GAGE2DQ9UEU5 116 aa6.81□□□□□ -1.32
PTPN13-207ENST00000508063 SEC11AP67812 179 aa6.8□□□□□ -1.32
PTPN13-207ENST00000508063 FAM19A5Q7Z5A7 132 aaPredicted RBP6.8□□□□□ -1.32
PTPN13-207ENST00000508063 DIRC1Q969H9 104 aa6.8□□□□□ -1.32
PTPN13-207ENST00000508063 AMELXQ99217 191 aa6.8□□□□□ -1.32
PTPN13-207ENST00000508063 NDUFC2-KCTD14E9PQ53 114 aa6.79□□□□□ -1.32
PTPN13-207ENST00000508063 IGLV7-43P04211 117 aa6.79□□□□□ -1.32
PTPN13-207ENST00000508063 CKS1BP61024 79 aa6.79□□□□□ -1.32
PTPN13-207ENST00000508063 FAM168BA1KXE4 195 aa6.78□□□□□ -1.32
PTPN13-207ENST00000508063 IGIPA6NJ69 53 aa6.78□□□□□ -1.32
PTPN13-207ENST00000508063 HERVK_113P63121 156 aa6.78□□□□□ -1.32
PTPN13-207ENST00000508063 UBE2BP63146 152 aa6.78□□□□□ -1.32
PTPN13-207ENST00000508063 C6orf226Q5I0X4 101 aa6.78□□□□□ -1.32
PTPN13-207ENST00000508063 FAM19A3Q7Z5A8 133 aa6.78□□□□□ -1.32
PTPN13-207ENST00000508063 TRAV9-1A0A075B6T8 112 aa6.77□□□□□ -1.33
PTPN13-207ENST00000508063 LINC01549A6NIU2 74 aa6.77□□□□□ -1.33
PTPN13-207ENST00000508063 M0QXV9 152 aa6.77□□□□□ -1.33
PTPN13-207ENST00000508063 SCO1O75880 301 aa6.77□□□□□ -1.33
PTPN13-207ENST00000508063 RHEBQ15382 184 aa6.77□□□□□ -1.33
PTPN13-207ENST00000508063 C2orf82Q6UX34 121 aa6.77□□□□□ -1.33
PTPN13-207ENST00000508063 LINC00173Q6ZV60 143 aa6.77□□□□□ -1.33
PTPN13-207ENST00000508063 Q8IZM0 81 aa6.77□□□□□ -1.33
PTPN13-207ENST00000508063 TIMM17AQ99595 171 aa6.77□□□□□ -1.33
PTPN13-207ENST00000508063 ALKBH7Q9BT30 221 aaPredicted RBP6.77□□□□□ -1.33
PTPN13-207ENST00000508063 GEMIN7Q9H840 131 aaKnown RBP6.77□□□□□ -1.33
PTPN13-207ENST00000508063 TOMM7Q9P0U1 55 aa6.77□□□□□ -1.33
PTPN13-207ENST00000508063 ZC2HC1BQ5TFG8 222 aa6.76□□□□□ -1.33
PTPN13-207ENST00000508063 TOMM6Q96B49 74 aa6.76□□□□□ -1.33
PTPN13-207ENST00000508063 H0Y9J4 135 aa6.75□□□□□ -1.33
PTPN13-207ENST00000508063 S100PP25815 95 aa6.75□□□□□ -1.33
PTPN13-207ENST00000508063 ERASQ7Z444 233 aa6.75□□□□□ -1.33
PTPN13-207ENST00000508063 CXCL5P42830 114 aa6.74□□□□□ -1.33
PTPN13-207ENST00000508063 KIAA1644Q3SXP7 199 aa6.74□□□□□ -1.33
PTPN13-207ENST00000508063 C9orf129Q5T035 196 aaKnown RBP6.74□□□□□ -1.33
PTPN13-207ENST00000508063 SCGB3A1Q96QR1 104 aa6.74□□□□□ -1.33
PTPN13-207ENST00000508063 RPS10P5Q9NQ39 176 aa6.74□□□□□ -1.33
PTPN13-207ENST00000508063 SMCO4Q9NRQ5 59 aa6.74□□□□□ -1.33
PTPN13-207ENST00000508063 F8VRH5 84 aa6.73□□□□□ -1.33
PTPN13-207ENST00000508063 ODF1Q14990 250 aa6.73□□□□□ -1.33
PTPN13-207ENST00000508063 COX19Q49B96 90 aa6.73□□□□□ -1.33
PTPN13-207ENST00000508063 LBHQ53QV2 105 aaPredicted RBP6.73□□□□□ -1.33
PTPN13-207ENST00000508063 KRTAP11-1Q8IUC1 163 aa6.73□□□□□ -1.33
PTPN13-207ENST00000508063 KRTAP7-1Q8IUC3 87 aa6.73□□□□□ -1.33
PTPN13-207ENST00000508063 GNB1LQ9BYB4 327 aa6.73□□□□□ -1.33
PTPN13-207ENST00000508063 CDKN2A-AS1Q9UH64 79 aa6.73□□□□□ -1.33
PTPN13-207ENST00000508063 LRP2P98164 4655 aa6.72□□□□□ -1.33
PTPN13-207ENST00000508063 IGLV1-50A0A075B6I6 118 aa6.72□□□□□ -1.33
PTPN13-207ENST00000508063 LINC00469Q8N7U9 141 aa6.72□□□□□ -1.33
PTPN13-207ENST00000508063 TINCRA0A1B0GVN0 87 aa6.71□□□□□ -1.34
PTPN13-207ENST00000508063 NUPR1O60356 82 aa6.71□□□□□ -1.34
PTPN13-207ENST00000508063 CBLN2Q8IUK8 224 aa6.71□□□□□ -1.34
PTPN13-207ENST00000508063 PRR26Q8N8Z3 221 aa6.71□□□□□ -1.34
PTPN13-207ENST00000508063 LINC01546A6NGU7 62 aa6.7□□□□□ -1.34
PTPN13-207ENST00000508063 RPL13AP40429 203 aaKnown RBP6.7□□□□□ -1.34
PTPN13-207ENST00000508063 PDZD11Q5EBL8 140 aa6.7□□□□□ -1.34
PTPN13-207ENST00000508063 FA2HQ7L5A8 372 aa6.7□□□□□ -1.34
PTPN13-207ENST00000508063 C22orf24Q9Y442 160 aa6.7□□□□□ -1.34
PTPN13-207ENST00000508063 SMIM1B2RUZ4 78 aa6.69□□□□□ -1.34
PTPN13-207ENST00000508063 COX7B2Q8TF08 81 aa6.69□□□□□ -1.34
PTPN13-207ENST00000508063 XAGE1AQ9HD64 81 aa6.69□□□□□ -1.34
PTPN13-207ENST00000508063 TP73-AS1Q9UF72 201 aa6.69□□□□□ -1.34
PTPN13-207ENST00000508063 IGLV5-45A0A087WSX0 123 aa6.68□□□□□ -1.34
PTPN13-207ENST00000508063 ZNF861PO60384 105 aa6.68□□□□□ -1.34
PTPN13-207ENST00000508063 FABP9Q0Z7S8 132 aa6.68□□□□□ -1.34
PTPN13-207ENST00000508063 PMVKQ15126 192 aa6.68□□□□□ -1.34
PTPN13-207ENST00000508063 MRPL55Q7Z7F7 128 aaKnown RBP6.68□□□□□ -1.34
PTPN13-207ENST00000508063 CST9LQ9H4G1 147 aa6.68□□□□□ -1.34
PTPN13-207ENST00000508063 TMA7Q9Y2S6 64 aaKnown RBP6.68□□□□□ -1.34
PTPN13-207ENST00000508063 H3BRM9 83 aa6.67□□□□□ -1.34
PTPN13-207ENST00000508063 KRTAP1-4P0C5Y4 121 aa6.67□□□□□ -1.34
PTPN13-207ENST00000508063 KRTAP9-9Q9BYP9 154 aa6.67□□□□□ -1.34
PTPN13-207ENST00000508063 KRTAP9-4Q9BYQ2 154 aa6.67□□□□□ -1.34
PTPN13-207ENST00000508063 RPL28P46779 137 aaKnown RBP6.66□□□□□ -1.34
PTPN13-207ENST00000508063 COLCA2A8K830 154 aa6.65□□□□□ -1.34
PTPN13-207ENST00000508063 ATP5LO75964 103 aa6.65□□□□□ -1.34
PTPN13-207ENST00000508063 SPINK8P0C7L1 97 aa6.65□□□□□ -1.34
PTPN13-207ENST00000508063 LINC00310P59036 64 aa6.65□□□□□ -1.34
PTPN13-207ENST00000508063 BCE1O60756 84 aa6.64□□□□□ -1.35
PTPN13-207ENST00000508063 YPEL4Q96NS1 127 aa6.64□□□□□ -1.35
PTPN13-207ENST00000508063 NDUFA6P56556 154 aa6.63□□□□□ -1.35
PTPN13-207ENST00000508063 RAB5BP61020 215 aa6.63□□□□□ -1.35
PTPN13-207ENST00000508063 NKAPP1Q8N9T2 125 aa6.63□□□□□ -1.35
PTPN13-207ENST00000508063 LINC00167Q96N53 147 aa6.63□□□□□ -1.35
PTPN13-207ENST00000508063 RNF213Q63HN8 5207 aa6.62□□□□□ -1.35
PTPN13-207ENST00000508063 IGLV5-37A0A075B6J1 123 aa6.62□□□□□ -1.35
PTPN13-207ENST00000508063 RPL37AP8A6NKH3 93 aa6.62□□□□□ -1.35
PTPN13-207ENST00000508063 LINC00614P0C842 121 aa6.62□□□□□ -1.35
PTPN13-207ENST00000508063 IGLC3P0DOY3 106 aa6.62□□□□□ -1.35
PTPN13-207ENST00000508063 TRAPPC1Q9Y5R8 145 aa6.62□□□□□ -1.35
PTPN13-207ENST00000508063 HBDP02042 147 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms