RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 XCL1P47992 114 aa3.44□□□□□ -1.86
HMGB3P16-201ENST00000508037 RBM3P98179 157 aaKnown RBP3.44□□□□□ -1.86
HMGB3P16-201ENST00000508037 LINC00612Q8N6U2 182 aa3.44□□□□□ -1.86
HMGB3P16-201ENST00000508037 CSNK1G2-AS1Q8NCQ2 148 aa3.44□□□□□ -1.86
HMGB3P16-201ENST00000508037 C16orf95Q9H693 158 aa3.44□□□□□ -1.86
HMGB3P16-201ENST00000508037 PRO0255Q9UI72 69 aa3.44□□□□□ -1.86
HMGB3P16-201ENST00000508037 AKAP13Q12802 2813 aa3.44□□□□□ -1.86
HMGB3P16-201ENST00000508037 MUC6Q6W4X9 2439 aa3.44□□□□□ -1.86
HMGB3P16-201ENST00000508037 AKAP6Q13023 2319 aa3.44□□□□□ -1.86
HMGB3P16-201ENST00000508037 NBASA2RRP1 2371 aa3.44□□□□□ -1.86
HMGB3P16-201ENST00000508037 ADGRG4Q8IZF6 3080 aa3.43□□□□□ -1.86
HMGB3P16-201ENST00000508037 DNAJC9-AS1A6NH13 148 aa3.43□□□□□ -1.86
HMGB3P16-201ENST00000508037 NDUFC1O43677 76 aa3.43□□□□□ -1.86
HMGB3P16-201ENST00000508037 SLPIP03973 132 aa3.43□□□□□ -1.86
HMGB3P16-201ENST00000508037 ATP5EP56381 51 aaPredicted RBP3.43□□□□□ -1.86
HMGB3P16-201ENST00000508037 C9orf129Q5T035 196 aaKnown RBP3.43□□□□□ -1.86
HMGB3P16-201ENST00000508037 LINC00575Q6W349 94 aa3.43□□□□□ -1.86
HMGB3P16-201ENST00000508037 MAPK1IP1LQ8NDC0 245 aa3.43□□□□□ -1.86
HMGB3P16-201ENST00000508037 DSCR8Q96T75 97 aa3.43□□□□□ -1.86
HMGB3P16-201ENST00000508037 SPENQ96T58 3664 aaKnown RBP3.43□□□□□ -1.86
HMGB3P16-201ENST00000508037 SORL1Q92673 2214 aa3.43□□□□□ -1.86
HMGB3P16-201ENST00000508037 A0A087WVE0 104 aa3.42□□□□□ -1.86
HMGB3P16-201ENST00000508037 TRBV7-6A0A0J9YX20 115 aa3.42□□□□□ -1.86
HMGB3P16-201ENST00000508037 FAM236DA0A1B0GTK5 79 aa3.42□□□□□ -1.86
HMGB3P16-201ENST00000508037 LYRM9A8MSI8 78 aa3.42□□□□□ -1.86
HMGB3P16-201ENST00000508037 FAM236CP0DP71 79 aa3.42□□□□□ -1.86
HMGB3P16-201ENST00000508037 CXCL6P80162 114 aa3.42□□□□□ -1.86
HMGB3P16-201ENST00000508037 ENHOQ6UWT2 76 aa3.42□□□□□ -1.86
HMGB3P16-201ENST00000508037 Q6ZQT0 140 aa3.42□□□□□ -1.86
HMGB3P16-201ENST00000508037 C6orf223Q8N319 242 aa3.42□□□□□ -1.86
HMGB3P16-201ENST00000508037 CHCHD10Q8WYQ3 142 aaPredicted RBP3.42□□□□□ -1.86
HMGB3P16-201ENST00000508037 C11orf68Q9H3H3 251 aaKnown RBP3.42□□□□□ -1.86
HMGB3P16-201ENST00000508037 LAMTOR3Q9UHA4 124 aa3.42□□□□□ -1.86
HMGB3P16-201ENST00000508037 SERP1Q9Y6X1 66 aa3.42□□□□□ -1.86
HMGB3P16-201ENST00000508037 KALRNO60229 2985 aa3.41□□□□□ -1.86
HMGB3P16-201ENST00000508037 HRNRQ86YZ3 2850 aaPredicted RBP3.41□□□□□ -1.86
HMGB3P16-201ENST00000508037 TRAV23DV6A0A075B6W5 121 aa3.41□□□□□ -1.86
HMGB3P16-201ENST00000508037 DEFB130BP0DP73 79 aa3.41□□□□□ -1.86
HMGB3P16-201ENST00000508037 DEFB130AP0DP74 79 aa3.41□□□□□ -1.86
HMGB3P16-201ENST00000508037 NANOS2P60321 138 aaKnown RBP3.41□□□□□ -1.86
HMGB3P16-201ENST00000508037 KIAA0087Q14695 138 aa3.41□□□□□ -1.86
HMGB3P16-201ENST00000508037 C6orf99Q4VX62 202 aa3.41□□□□□ -1.86
HMGB3P16-201ENST00000508037 C9orf66Q5T8R8 295 aa3.41□□□□□ -1.86
HMGB3P16-201ENST00000508037 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.41□□□□□ -1.86
HMGB3P16-201ENST00000508037 WWC2-AS2Q96NR7 200 aa3.41□□□□□ -1.86
HMGB3P16-201ENST00000508037 BOD1L1Q8NFC6 3051 aa3.41□□□□□ -1.86
HMGB3P16-201ENST00000508037 CREBBPQ92793 2442 aa3.41□□□□□ -1.86
HMGB3P16-201ENST00000508037 GVQW2A0A096LPI5 108 aaPredicted RBP3.4□□□□□ -1.87
HMGB3P16-201ENST00000508037 A0A0J9YWU9 116 aa3.4□□□□□ -1.87
HMGB3P16-201ENST00000508037 IGLV6-57P01721 117 aa3.4□□□□□ -1.87
HMGB3P16-201ENST00000508037 ANGP03950 147 aaKnown RBP3.4□□□□□ -1.87
HMGB3P16-201ENST00000508037 IGHV4-30-4P0DP06 118 aa3.4□□□□□ -1.87
HMGB3P16-201ENST00000508037 REG3AQ06141 175 aa3.4□□□□□ -1.87
HMGB3P16-201ENST00000508037 KLKP1Q107X0 134 aa3.4□□□□□ -1.87
HMGB3P16-201ENST00000508037 CSPG4Q6UVK1 2322 aa3.4□□□□□ -1.87
HMGB3P16-201ENST00000508037 FAM19A1Q7Z5A9 133 aa3.4□□□□□ -1.87
HMGB3P16-201ENST00000508037 C20orf197Q8N268 126 aa3.4□□□□□ -1.87
HMGB3P16-201ENST00000508037 LINC00269Q8N2A0 174 aa3.4□□□□□ -1.87
HMGB3P16-201ENST00000508037 MRAPQ8TCY5 172 aa3.4□□□□□ -1.87
HMGB3P16-201ENST00000508037 DIRC1Q969H9 104 aa3.4□□□□□ -1.87
HMGB3P16-201ENST00000508037 CFAP47Q6ZTR5 3102 aa3.4□□□□□ -1.87
HMGB3P16-201ENST00000508037 BSNQ9UPA5 3926 aa3.4□□□□□ -1.87
HMGB3P16-201ENST00000508037 DMXL2Q8TDJ6 3036 aa3.4□□□□□ -1.87
HMGB3P16-201ENST00000508037 ZFHX4Q86UP3 3567 aa3.4□□□□□ -1.87
HMGB3P16-201ENST00000508037 ERC2-IT1O76042 136 aa3.39□□□□□ -1.87
HMGB3P16-201ENST00000508037 COX7BP24311 80 aa3.39□□□□□ -1.87
HMGB3P16-201ENST00000508037 LINC01547P58512 204 aaPredicted RBP3.39□□□□□ -1.87
HMGB3P16-201ENST00000508037 HILS1P60008 231 aa3.39□□□□□ -1.87
HMGB3P16-201ENST00000508037 HAMPP81172 84 aa3.39□□□□□ -1.87
HMGB3P16-201ENST00000508037 SPAG11BQ08648 103 aa3.39□□□□□ -1.87
HMGB3P16-201ENST00000508037 Q6ZVQ6 151 aa3.39□□□□□ -1.87
HMGB3P16-201ENST00000508037 SMG1Q96Q15 3661 aaKnown RBP3.39□□□□□ -1.87
HMGB3P16-201ENST00000508037 CEP295Q9C0D2 2601 aa3.39□□□□□ -1.87
HMGB3P16-201ENST00000508037 ATRXP46100 2492 aa3.38□□□□□ -1.87
HMGB3P16-201ENST00000508037 PLA2G2AP14555 144 aa3.38□□□□□ -1.87
HMGB3P16-201ENST00000508037 APOC4P55056 127 aa3.38□□□□□ -1.87
HMGB3P16-201ENST00000508037 LELP1Q5T871 98 aa3.38□□□□□ -1.87
HMGB3P16-201ENST00000508037 CLPSL2Q6UWE3 100 aa3.38□□□□□ -1.87
HMGB3P16-201ENST00000508037 LINC01006Q8NI28 216 aa3.38□□□□□ -1.87
HMGB3P16-201ENST00000508037 CYSTM1Q9H1C7 97 aa3.38□□□□□ -1.87
HMGB3P16-201ENST00000508037 WFDC10AQ9H1F0 79 aa3.38□□□□□ -1.87
HMGB3P16-201ENST00000508037 IGF2RP11717 2491 aa3.38□□□□□ -1.87
HMGB3P16-201ENST00000508037 TACC2O95359 2948 aa3.37□□□□□ -1.87
HMGB3P16-201ENST00000508037 SMIM26A0A096LP01 95 aa3.37□□□□□ -1.87
HMGB3P16-201ENST00000508037 TRBV7-4A0A0J9YYF1 115 aa3.37□□□□□ -1.87
HMGB3P16-201ENST00000508037 A0A1B0GW54 56 aa3.37□□□□□ -1.87
HMGB3P16-201ENST00000508037 EPM2AB3EWF7 344 aa3.37□□□□□ -1.87
HMGB3P16-201ENST00000508037 F8WDY8 70 aa3.37□□□□□ -1.87
HMGB3P16-201ENST00000508037 DAD1P61803 113 aa3.37□□□□□ -1.87
HMGB3P16-201ENST00000508037 PRR3P79522 188 aaKnown RBP3.37□□□□□ -1.87
HMGB3P16-201ENST00000508037 Q6ZQY7 126 aa3.37□□□□□ -1.87
HMGB3P16-201ENST00000508037 WFDC9Q8NEX5 89 aa3.37□□□□□ -1.87
HMGB3P16-201ENST00000508037 BBC3Q96PG8 261 aaPredicted RBP3.37□□□□□ -1.87
HMGB3P16-201ENST00000508037 LRBAP50851 2863 aa3.37□□□□□ -1.87
HMGB3P16-201ENST00000508037 DOPEY1Q5JWR5 2465 aa3.36□□□□□ -1.87
HMGB3P16-201ENST00000508037 CR1P17927 2039 aa3.36□□□□□ -1.87
HMGB3P16-201ENST00000508037 IGLV10-54A0A075B6I4 117 aa3.36□□□□□ -1.87
HMGB3P16-201ENST00000508037 CYSRT1A8MQ03 144 aa3.36□□□□□ -1.87
HMGB3P16-201ENST00000508037 H7BZZ5 65 aa3.36□□□□□ -1.87
HMGB3P16-201ENST00000508037 ZNF73O43830 326 aaPredicted RBP3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms