RNA–Protein interactions for RNA: ENST00000507326.2

HMGB3P15-201, Transcript of high mobility group box 3 pseudogene 15, humanhuman

BASIC

Gene HMGB3P15, Length 574 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P15-201ENST00000507326 NDPQ00604 133 aa2.09□□□□□ -2.07
HMGB3P15-201ENST00000507326 CYYR1Q96J86 154 aa2.09□□□□□ -2.07
HMGB3P15-201ENST00000507326 FAM103A1Q9BTL3 118 aaKnown RBP2.09□□□□□ -2.07
HMGB3P15-201ENST00000507326 PRR15LQ9BU68 103 aa2.09□□□□□ -2.07
HMGB3P15-201ENST00000507326 WFDC10AQ9H1F0 79 aa2.09□□□□□ -2.07
HMGB3P15-201ENST00000507326 HILPDAQ9Y5L2 63 aa2.09□□□□□ -2.07
HMGB3P15-201ENST00000507326 SNURFQ9Y675 71 aa2.09□□□□□ -2.07
HMGB3P15-201ENST00000507326 IGKV3-7A0A075B6H7 116 aa2.08□□□□□ -2.08
HMGB3P15-201ENST00000507326 TRBV6-5A0A0K0K1A5 114 aa2.08□□□□□ -2.08
HMGB3P15-201ENST00000507326 P0C880 135 aa2.08□□□□□ -2.08
HMGB3P15-201ENST00000507326 SPINT3P49223 89 aa2.08□□□□□ -2.08
HMGB3P15-201ENST00000507326 UBE2D4Q9Y2X8 147 aa2.08□□□□□ -2.08
HMGB3P15-201ENST00000507326 SEC16AO15027 2179 aa2.08□□□□□ -2.08
HMGB3P15-201ENST00000507326 TNRC6BQ9UPQ9 1833 aaKnown RBP2.07□□□□□ -2.08
HMGB3P15-201ENST00000507326 C10orf55Q5SWW7 151 aa2.07□□□□□ -2.08
HMGB3P15-201ENST00000507326 TOMM5Q8N4H5 51 aa2.07□□□□□ -2.08
HMGB3P15-201ENST00000507326 LINC00846Q9NV44 126 aa2.07□□□□□ -2.08
HMGB3P15-201ENST00000507326 LINC01558Q9Y6Z2 57 aa2.07□□□□□ -2.08
HMGB3P15-201ENST00000507326 IGKV2-40A0A087WW87 121 aaPredicted RBP2.06□□□□□ -2.08
HMGB3P15-201ENST00000507326 H3BRN7 92 aa2.06□□□□□ -2.08
HMGB3P15-201ENST00000507326 IGKV2D-40P01614 121 aaPredicted RBP2.06□□□□□ -2.08
HMGB3P15-201ENST00000507326 CCL18P55774 89 aa2.06□□□□□ -2.08
HMGB3P15-201ENST00000507326 LINC00322Q6ZN03 302 aaPredicted RBP2.06□□□□□ -2.08
HMGB3P15-201ENST00000507326 DOCK10Q96BY6 2186 aa2.06□□□□□ -2.08
HMGB3P15-201ENST00000507326 DNAJC13O75165 2243 aa2.05□□□□□ -2.08
HMGB3P15-201ENST00000507326 A0A1W2PNN7 141 aa2.05□□□□□ -2.08
HMGB3P15-201ENST00000507326 M0R135 149 aa2.05□□□□□ -2.08
HMGB3P15-201ENST00000507326 IL9P15248 144 aa2.05□□□□□ -2.08
HMGB3P15-201ENST00000507326 RPL37AP61513 92 aaKnown RBP2.05□□□□□ -2.08
HMGB3P15-201ENST00000507326 ZNF563Q8TA94 476 aa2.05□□□□□ -2.08
HMGB3P15-201ENST00000507326 COL4A2P08572 1712 aa2.05□□□□□ -2.08
HMGB3P15-201ENST00000507326 TRGV4A0A0C4DH28 118 aa2.04□□□□□ -2.08
HMGB3P15-201ENST00000507326 A0A0G2JQZ4 141 aa2.04□□□□□ -2.08
HMGB3P15-201ENST00000507326 IGKV1-17P01599 117 aa2.04□□□□□ -2.08
HMGB3P15-201ENST00000507326 IGLV3-1P01715 115 aa2.04□□□□□ -2.08
HMGB3P15-201ENST00000507326 PRH1P02810 166 aa2.04□□□□□ -2.08
HMGB3P15-201ENST00000507326 ABCA4P78363 2273 aa2.04□□□□□ -2.08
HMGB3P15-201ENST00000507326 SERF2P84101 59 aa2.04□□□□□ -2.08
HMGB3P15-201ENST00000507326 DEFB132Q7Z7B7 95 aa2.04□□□□□ -2.08
HMGB3P15-201ENST00000507326 ZFHX2Q9C0A1 2572 aaPredicted RBP2.04□□□□□ -2.08
HMGB3P15-201ENST00000507326 FREM1Q5H8C1 2179 aa2.03□□□□□ -2.08
HMGB3P15-201ENST00000507326 M0R3E3 92 aa2.03□□□□□ -2.08
HMGB3P15-201ENST00000507326 ANAPC11Q9NYG5 84 aa2.03□□□□□ -2.08
HMGB3P15-201ENST00000507326 TRBV30A0A0K0K1B3 111 aa2.02□□□□□ -2.09
HMGB3P15-201ENST00000507326 CLPSL1A2RUU4 121 aa2.02□□□□□ -2.09
HMGB3P15-201ENST00000507326 H0Y9P7 68 aa2.02□□□□□ -2.09
HMGB3P15-201ENST00000507326 INE1O15225 51 aa2.02□□□□□ -2.09
HMGB3P15-201ENST00000507326 NCBP2-AS2Q69YL0 99 aa2.02□□□□□ -2.09
HMGB3P15-201ENST00000507326 HCP5Q6MZN7 132 aa2.02□□□□□ -2.09
HMGB3P15-201ENST00000507326 TXNDC17Q9BRA2 123 aa2.02□□□□□ -2.09
HMGB3P15-201ENST00000507326 UBL5Q9BZL1 73 aa2.02□□□□□ -2.09
HMGB3P15-201ENST00000507326 INTS1Q8N201 2190 aaKnown RBP2.01□□□□□ -2.09
HMGB3P15-201ENST00000507326 A0A087WVE0 104 aa2.01□□□□□ -2.09
HMGB3P15-201ENST00000507326 LOC110117498A0A087WWA1 95 aa2.01□□□□□ -2.09
HMGB3P15-201ENST00000507326 TRBV7-4A0A0J9YYF1 115 aa2.01□□□□□ -2.09
HMGB3P15-201ENST00000507326 LINC01549A6NIU2 74 aa2.01□□□□□ -2.09
HMGB3P15-201ENST00000507326 HCRTO43612 131 aa2.01□□□□□ -2.09
HMGB3P15-201ENST00000507326 PRB2P02812 416 aaPredicted RBP2.01□□□□□ -2.09
HMGB3P15-201ENST00000507326 FXYD3Q14802 87 aa2.01□□□□□ -2.09
HMGB3P15-201ENST00000507326 PRR9Q5T870 116 aa2.01□□□□□ -2.09
HMGB3P15-201ENST00000507326 C10orf113Q5VZT2 155 aa2.01□□□□□ -2.09
HMGB3P15-201ENST00000507326 WFDC6Q9BQY6 131 aa2.01□□□□□ -2.09
HMGB3P15-201ENST00000507326 NMES1Q9C002 83 aa2.01□□□□□ -2.09
HMGB3P15-201ENST00000507326 NCOA6Q14686 2063 aaPredicted RBP2.01□□□□□ -2.09
HMGB3P15-201ENST00000507326 GOLGB1Q14789 3259 aaKnown RBP2□□□□□ -2.09
HMGB3P15-201ENST00000507326 IGKV3D-7A0A0C4DH55 119 aa2□□□□□ -2.09
HMGB3P15-201ENST00000507326 IGKV3OR2-268A0A0C4DH90 116 aa2□□□□□ -2.09
HMGB3P15-201ENST00000507326 M0R2N4 97 aa2□□□□□ -2.09
HMGB3P15-201ENST00000507326 CAV3P56539 151 aa2□□□□□ -2.09
HMGB3P15-201ENST00000507326 RPL38P63173 70 aaKnown RBP2□□□□□ -2.09
HMGB3P15-201ENST00000507326 COA5Q86WW8 74 aa2□□□□□ -2.09
HMGB3P15-201ENST00000507326 WFDC9Q8NEX5 89 aa2□□□□□ -2.09
HMGB3P15-201ENST00000507326 TMEM263Q8WUH6 116 aaKnown RBP2□□□□□ -2.09
HMGB3P15-201ENST00000507326 LINC00208Q96KT6 92 aa2□□□□□ -2.09
HMGB3P15-201ENST00000507326 GPR179Q6PRD1 2367 aa2□□□□□ -2.09
HMGB3P15-201ENST00000507326 KRTAP5-8O75690 187 aa1.99□□□□□ -2.09
HMGB3P15-201ENST00000507326 RNASE3P12724 160 aaKnown RBP1.99□□□□□ -2.09
HMGB3P15-201ENST00000507326 ACYP2P14621 99 aa1.99□□□□□ -2.09
HMGB3P15-201ENST00000507326 S100A3P33764 101 aa1.99□□□□□ -2.09
HMGB3P15-201ENST00000507326 ZNF137PP52743 207 aa1.99□□□□□ -2.09
HMGB3P15-201ENST00000507326 GDF5OSQ5U4N7 250 aa1.99□□□□□ -2.09
HMGB3P15-201ENST00000507326 DEFB107AQ8IZN7 70 aa1.99□□□□□ -2.09
HMGB3P15-201ENST00000507326 FDCSPQ8NFU4 85 aa1.99□□□□□ -2.09
HMGB3P15-201ENST00000507326 CMC2Q9NRP2 79 aa1.99□□□□□ -2.09
HMGB3P15-201ENST00000507326 TRAV1-2A0A0B4J238 106 aa1.98□□□□□ -2.09
HMGB3P15-201ENST00000507326 IGKV2-29A2NJV5 120 aaPredicted RBP1.98□□□□□ -2.09
HMGB3P15-201ENST00000507326 FCER1GP30273 86 aa1.98□□□□□ -2.09
HMGB3P15-201ENST00000507326 LINC00315P59091 139 aa1.98□□□□□ -2.09
HMGB3P15-201ENST00000507326 FXYD4P59646 89 aa1.98□□□□□ -2.09
HMGB3P15-201ENST00000507326 NREPQ16612 68 aa1.98□□□□□ -2.09
HMGB3P15-201ENST00000507326 Q6ZQY7 126 aa1.98□□□□□ -2.09
HMGB3P15-201ENST00000507326 C5orf56Q8N8D9 126 aa1.98□□□□□ -2.09
HMGB3P15-201ENST00000507326 TTTY12Q9BZ98 90 aa1.98□□□□□ -2.09
HMGB3P15-201ENST00000507326 PROK2Q9HC23 129 aa1.98□□□□□ -2.09
HMGB3P15-201ENST00000507326 PCNTO95613 3336 aa1.97□□□□□ -2.09
HMGB3P15-201ENST00000507326 TRBV6-1A0A0K0K1D8 114 aa1.97□□□□□ -2.09
HMGB3P15-201ENST00000507326 DEFB106AQ8N104 65 aa1.97□□□□□ -2.09
HMGB3P15-201ENST00000507326 UTRNP46939 3433 aa1.97□□□□□ -2.09
HMGB3P15-201ENST00000507326 FN1P02751 2386 aaKnown RBP1.96□□□□□ -2.09
HMGB3P15-201ENST00000507326 SRCAPQ6ZRS2 3230 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms