RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 CAMK2N2Q96S95 79 aa9.22□□□□□ -0.93
RNF4-208ENST00000507247 A0A1B0GVY2 172 aa9.21□□□□□ -0.94
RNF4-208ENST00000507247 CXCL5P42830 114 aa9.21□□□□□ -0.94
RNF4-208ENST00000507247 KRTAP10-2P60368 255 aa9.21□□□□□ -0.94
RNF4-208ENST00000507247 CNBPP62633 177 aaKnown RBP9.21□□□□□ -0.94
RNF4-208ENST00000507247 SYCNQ0VAF6 134 aa9.21□□□□□ -0.94
RNF4-208ENST00000507247 TTTY13Q9BZ97 58 aa9.21□□□□□ -0.94
RNF4-208ENST00000507247 HSBP1L1C9JCN9 74 aa9.2□□□□□ -0.94
RNF4-208ENST00000507247 F8WDY8 70 aa9.2□□□□□ -0.94
RNF4-208ENST00000507247 NDUFA1O15239 70 aa9.2□□□□□ -0.94
RNF4-208ENST00000507247 LGALS3P17931 250 aaKnown RBP9.2□□□□□ -0.94
RNF4-208ENST00000507247 NMUP48645 174 aa9.2□□□□□ -0.94
RNF4-208ENST00000507247 CKS1BP61024 79 aa9.2□□□□□ -0.94
RNF4-208ENST00000507247 ZNF625Q96I27 306 aaPredicted RBP9.2□□□□□ -0.94
RNF4-208ENST00000507247 CARD19Q96LW7 228 aa9.2□□□□□ -0.94
RNF4-208ENST00000507247 PAM16Q9Y3D7 125 aa9.2□□□□□ -0.94
RNF4-208ENST00000507247 VAMP8Q9BV40 100 aa9.19□□□□□ -0.94
RNF4-208ENST00000507247 C6orf48Q9UBA6 75 aa9.19□□□□□ -0.94
RNF4-208ENST00000507247 NDUFA12Q9UI09 145 aa9.19□□□□□ -0.94
RNF4-208ENST00000507247 SPATA45Q537H7 98 aa9.18□□□□□ -0.94
RNF4-208ENST00000507247 PCP2Q8IVA1 136 aa9.18□□□□□ -0.94
RNF4-208ENST00000507247 FAT2Q9NYQ8 4349 aa9.18□□□□□ -0.94
RNF4-208ENST00000507247 SMIM6P0DI80 62 aa9.17□□□□□ -0.94
RNF4-208ENST00000507247 LINC01620Q4KN68 170 aa9.17□□□□□ -0.94
RNF4-208ENST00000507247 C9orf116Q5BN46 136 aaPredicted RBP9.17□□□□□ -0.94
RNF4-208ENST00000507247 IGLV5-52A0A0A0MRZ9 124 aa9.16□□□□□ -0.94
RNF4-208ENST00000507247 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.16□□□□□ -0.94
RNF4-208ENST00000507247 TRBV30A0A0K0K1B3 111 aa9.16□□□□□ -0.94
RNF4-208ENST00000507247 C9orf163Q8N9P6 203 aa9.16□□□□□ -0.94
RNF4-208ENST00000507247 MYMXA0A1B0GTQ4 84 aa9.15□□□□□ -0.94
RNF4-208ENST00000507247 ZNF815PA8K554 130 aa9.15□□□□□ -0.94
RNF4-208ENST00000507247 RNF151Q2KHN1 245 aa9.15□□□□□ -0.94
RNF4-208ENST00000507247 TP73-AS1Q9UF72 201 aa9.15□□□□□ -0.94
RNF4-208ENST00000507247 HERV-K104P63124 156 aa9.14□□□□□ -0.95
RNF4-208ENST00000507247 SFTA2Q6UW10 78 aa9.14□□□□□ -0.95
RNF4-208ENST00000507247 PGPEP1Q9NXJ5 209 aa9.14□□□□□ -0.95
RNF4-208ENST00000507247 A0A0J9YXY3 114 aa9.12□□□□□ -0.95
RNF4-208ENST00000507247 COX8AP10176 69 aa9.12□□□□□ -0.95
RNF4-208ENST00000507247 S100A12P80511 92 aa9.12□□□□□ -0.95
RNF4-208ENST00000507247 C14orf144Q96I85 54 aa9.12□□□□□ -0.95
RNF4-208ENST00000507247 ERG28Q9UKR5 140 aa9.12□□□□□ -0.95
RNF4-208ENST00000507247 DNAH11Q96DT5 4516 aa9.12□□□□□ -0.95
RNF4-208ENST00000507247 HECTD4Q9Y4D8 3996 aa9.11□□□□□ -0.95
RNF4-208ENST00000507247 PFN2P35080 140 aa9.11□□□□□ -0.95
RNF4-208ENST00000507247 MEIG1Q5JSS6 88 aa9.11□□□□□ -0.95
RNF4-208ENST00000507247 BOD1L2Q8IYS8 172 aa9.11□□□□□ -0.95
RNF4-208ENST00000507247 KRTAP17-1Q9BYP8 105 aa9.11□□□□□ -0.95
RNF4-208ENST00000507247 A0A0U1RRA0 63 aa9.1□□□□□ -0.95
RNF4-208ENST00000507247 LOC107984640A0A0U1RRK4 108 aa9.1□□□□□ -0.95
RNF4-208ENST00000507247 TLX1NBP0CAT3 122 aa9.1□□□□□ -0.95
RNF4-208ENST00000507247 SMIM13P0DJ93 91 aa9.1□□□□□ -0.95
RNF4-208ENST00000507247 RPL18AQ02543 176 aaKnown RBP9.1□□□□□ -0.95
RNF4-208ENST00000507247 SDIM1Q6ZPB5 146 aa9.1□□□□□ -0.95
RNF4-208ENST00000507247 Q6ZRP5 223 aa9.1□□□□□ -0.95
RNF4-208ENST00000507247 C12orf57Q99622 126 aa9.1□□□□□ -0.95
RNF4-208ENST00000507247 PKD1P98161 4303 aa9.09□□□□□ -0.95
RNF4-208ENST00000507247 NDUFC2-KCTD14E9PQ53 114 aa9.09□□□□□ -0.95
RNF4-208ENST00000507247 GCSHP23434 173 aa9.09□□□□□ -0.95
RNF4-208ENST00000507247 LITAFQ99732 161 aa9.09□□□□□ -0.95
RNF4-208ENST00000507247 A0A096LNI7 61 aa9.08□□□□□ -0.96
RNF4-208ENST00000507247 DLEU1O43261 78 aa9.08□□□□□ -0.96
RNF4-208ENST00000507247 LINC00158P58513 81 aa9.08□□□□□ -0.96
RNF4-208ENST00000507247 KRTAP10-1P60331 282 aa9.08□□□□□ -0.96
RNF4-208ENST00000507247 COX17Q14061 63 aa9.08□□□□□ -0.96
RNF4-208ENST00000507247 HERC2O95714 4834 aa9.08□□□□□ -0.96
RNF4-208ENST00000507247 CHTF8P0CG12 524 aa9.07□□□□□ -0.96
RNF4-208ENST00000507247 GAGE2BQ13066 116 aa9.07□□□□□ -0.96
RNF4-208ENST00000507247 GAGE2EQ4V326 116 aa9.07□□□□□ -0.96
RNF4-208ENST00000507247 ADAMTSL4-AS1Q5T5F5 129 aa9.07□□□□□ -0.96
RNF4-208ENST00000507247 SLC25A34Q6PIV7 304 aa9.07□□□□□ -0.96
RNF4-208ENST00000507247 SCGB1D4Q6XE38 83 aa9.07□□□□□ -0.96
RNF4-208ENST00000507247 LINC00518Q8N0U6 118 aa9.07□□□□□ -0.96
RNF4-208ENST00000507247 DAND5Q8N907 189 aa9.07□□□□□ -0.96
RNF4-208ENST00000507247 GAGE2DQ9UEU5 116 aa9.07□□□□□ -0.96
RNF4-208ENST00000507247 C16orf90A8MZG2 172 aa9.06□□□□□ -0.96
RNF4-208ENST00000507247 LINC00587B1AMM8 73 aa9.06□□□□□ -0.96
RNF4-208ENST00000507247 PANO1I0J062 215 aa9.06□□□□□ -0.96
RNF4-208ENST00000507247 PTTG1IPP53801 180 aa9.06□□□□□ -0.96
RNF4-208ENST00000507247 MIR7-3HGQ8N6C7 128 aa9.06□□□□□ -0.96
RNF4-208ENST00000507247 PRO1933Q9H354 126 aa9.06□□□□□ -0.96
RNF4-208ENST00000507247 KIAA1109Q2LD37 5005 aa9.05□□□□□ -0.96
RNF4-208ENST00000507247 IGKV2-24A0A0C4DH68 120 aa9.05□□□□□ -0.96
RNF4-208ENST00000507247 TIMM17BO60830 172 aa9.05□□□□□ -0.96
RNF4-208ENST00000507247 XAGE1AQ9HD64 81 aa9.05□□□□□ -0.96
RNF4-208ENST00000507247 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.05□□□□□ -0.96
RNF4-208ENST00000507247 CIRBPQ14011 172 aaKnown RBP9.04□□□□□ -0.96
RNF4-208ENST00000507247 C9orf129Q5T035 196 aaKnown RBP9.04□□□□□ -0.96
RNF4-208ENST00000507247 C2orf91Q6ZV80 131 aa9.04□□□□□ -0.96
RNF4-208ENST00000507247 SND1-IT1Q9HBX3 110 aa9.04□□□□□ -0.96
RNF4-208ENST00000507247 FAM30AQ9NZY2 134 aa9.04□□□□□ -0.96
RNF4-208ENST00000507247 PKIGQ9Y2B9 76 aa9.04□□□□□ -0.96
RNF4-208ENST00000507247 DNAH5Q8TE73 4624 aa9.03□□□□□ -0.96
RNF4-208ENST00000507247 TMEM238C9JI98 176 aa9.02□□□□□ -0.97
RNF4-208ENST00000507247 EIF4EBP3O60516 100 aaPredicted RBP9.02□□□□□ -0.97
RNF4-208ENST00000507247 NPC2P61916 151 aa9.02□□□□□ -0.97
RNF4-208ENST00000507247 SOSTDC1Q6X4U4 206 aa9.02□□□□□ -0.97
RNF4-208ENST00000507247 SPACA4Q8TDM5 124 aa9.02□□□□□ -0.97
RNF4-208ENST00000507247 SPANXDQ9BXN6 97 aa9.02□□□□□ -0.97
RNF4-208ENST00000507247 SPANXCQ9NY87 97 aa9.02□□□□□ -0.97
RNF4-208ENST00000507247 UQCR10Q9UDW1 63 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms