RNA–Protein interactions for RNA: ENST00000507215.5

NR1I3-224, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 620 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-224ENST00000507215 M0QXV9 152 aa3.93□□□□□ -1.78
NR1I3-224ENST00000507215 TCAPO15273 167 aa3.93□□□□□ -1.78
NR1I3-224ENST00000507215 PDE6DO43924 150 aa3.93□□□□□ -1.78
NR1I3-224ENST00000507215 TSPAN13O95857 204 aa3.93□□□□□ -1.78
NR1I3-224ENST00000507215 RPL28P46779 137 aaKnown RBP3.93□□□□□ -1.78
NR1I3-224ENST00000507215 Q8N377 158 aa3.93□□□□□ -1.78
NR1I3-224ENST00000507215 TYMSOSQ8TAI1 123 aa3.93□□□□□ -1.78
NR1I3-224ENST00000507215 SMDT1Q9H4I9 107 aa3.93□□□□□ -1.78
NR1I3-224ENST00000507215 RPS10P5Q9NQ39 176 aa3.93□□□□□ -1.78
NR1I3-224ENST00000507215 TRBV30A0A0K0K1B3 111 aa3.92□□□□□ -1.78
NR1I3-224ENST00000507215 FAM19A5Q7Z5A7 132 aaPredicted RBP3.92□□□□□ -1.78
NR1I3-224ENST00000507215 FAM213BQ8TBF2 198 aa3.92□□□□□ -1.78
NR1I3-224ENST00000507215 BORCS7Q96B45 105 aa3.92□□□□□ -1.78
NR1I3-224ENST00000507215 RPL39LQ96EH5 51 aaKnown RBP3.92□□□□□ -1.78
NR1I3-224ENST00000507215 TIMM21Q9BVV7 248 aa3.92□□□□□ -1.78
NR1I3-224ENST00000507215 FCER1GP30273 86 aa3.91□□□□□ -1.78
NR1I3-224ENST00000507215 IFITM3Q01628 133 aa3.91□□□□□ -1.78
NR1I3-224ENST00000507215 ORAOV1Q8WV07 137 aa3.91□□□□□ -1.78
NR1I3-224ENST00000507215 KIR2DL4Q99706 377 aa3.91□□□□□ -1.78
NR1I3-224ENST00000507215 TMEM242Q9NWH2 141 aa3.91□□□□□ -1.78
NR1I3-224ENST00000507215 TRAV13-1A0A0B4J241 112 aa3.9□□□□□ -1.79
NR1I3-224ENST00000507215 FAM168BA1KXE4 195 aa3.9□□□□□ -1.79
NR1I3-224ENST00000507215 NDUFC2-KCTD14E9PQ53 114 aa3.9□□□□□ -1.79
NR1I3-224ENST00000507215 PPP1R2P9O14990 202 aa3.9□□□□□ -1.79
NR1I3-224ENST00000507215 POLR2KP53803 58 aaKnown RBP3.9□□□□□ -1.79
NR1I3-224ENST00000507215 ZNF345Q14585 488 aa3.9□□□□□ -1.79
NR1I3-224ENST00000507215 FAM229BQ4G0N7 80 aa3.9□□□□□ -1.79
NR1I3-224ENST00000507215 C5orf38Q86SI9 138 aa3.9□□□□□ -1.79
NR1I3-224ENST00000507215 TP73-AS1Q9UF72 201 aa3.9□□□□□ -1.79
NR1I3-224ENST00000507215 UBE2D4Q9Y2X8 147 aa3.9□□□□□ -1.79
NR1I3-224ENST00000507215 IGHV3OR16-9A0A0B4J2B5 98 aa3.89□□□□□ -1.79
NR1I3-224ENST00000507215 A8MWL6 223 aa3.89□□□□□ -1.79
NR1I3-224ENST00000507215 ARPC5O15511 151 aa3.89□□□□□ -1.79
NR1I3-224ENST00000507215 HERV-K104P63124 156 aa3.89□□□□□ -1.79
NR1I3-224ENST00000507215 C6orf226Q5I0X4 101 aa3.89□□□□□ -1.79
NR1I3-224ENST00000507215 LINC00173Q6ZV60 143 aa3.89□□□□□ -1.79
NR1I3-224ENST00000507215 FP248Q71RG6 208 aaPredicted RBP3.89□□□□□ -1.79
NR1I3-224ENST00000507215 LINC00304Q8N9R0 145 aa3.89□□□□□ -1.79
NR1I3-224ENST00000507215 PACRGQ96M98 296 aaPredicted RBP3.89□□□□□ -1.79
NR1I3-224ENST00000507215 GNG13Q9P2W3 67 aa3.89□□□□□ -1.79
NR1I3-224ENST00000507215 TGIF2-C20orf24A0A0A6YYL0 155 aa3.88□□□□□ -1.79
NR1I3-224ENST00000507215 BCE1O60756 84 aa3.88□□□□□ -1.79
NR1I3-224ENST00000507215 FOXA3P55318 350 aaPredicted RBP3.88□□□□□ -1.79
NR1I3-224ENST00000507215 Q5BKY6 102 aa3.88□□□□□ -1.79
NR1I3-224ENST00000507215 AKAP14Q86UN6 197 aa3.88□□□□□ -1.79
NR1I3-224ENST00000507215 KRTAP11-1Q8IUC1 163 aa3.88□□□□□ -1.79
NR1I3-224ENST00000507215 TMEM191AQ9H0A3 160 aa3.88□□□□□ -1.79
NR1I3-224ENST00000507215 MED9Q9NWA0 146 aa3.88□□□□□ -1.79
NR1I3-224ENST00000507215 C6orf48Q9UBA6 75 aa3.88□□□□□ -1.79
NR1I3-224ENST00000507215 MUC17Q685J3 4493 aa3.88□□□□□ -1.79
NR1I3-224ENST00000507215 A0A1B0GV50 99 aa3.87□□□□□ -1.79
NR1I3-224ENST00000507215 KANTRA0A1W2PQU2 76 aa3.87□□□□□ -1.79
NR1I3-224ENST00000507215 HBBP68871 147 aa3.87□□□□□ -1.79
NR1I3-224ENST00000507215 MRPS36P82909 103 aaKnown RBP3.87□□□□□ -1.79
NR1I3-224ENST00000507215 ASB16-AS1Q495Z4 193 aa3.87□□□□□ -1.79
NR1I3-224ENST00000507215 SPAG11AQ6PDA7 123 aa3.87□□□□□ -1.79
NR1I3-224ENST00000507215 UNQ6190/PRO20217Q6UXQ8 127 aa3.87□□□□□ -1.79
NR1I3-224ENST00000507215 LINC01561Q8N1V8 128 aa3.87□□□□□ -1.79
NR1I3-224ENST00000507215 LINC00337Q8N6G1 96 aa3.87□□□□□ -1.79
NR1I3-224ENST00000507215 RNASE7Q9H1E1 156 aaKnown RBP3.87□□□□□ -1.79
NR1I3-224ENST00000507215 SPANXA1Q9NS26 97 aa3.87□□□□□ -1.79
NR1I3-224ENST00000507215 TRBV20OR9-2A0A075B6H5 130 aa3.86□□□□□ -1.79
NR1I3-224ENST00000507215 IGKV2D-26A0A0A0MRZ7 120 aa3.86□□□□□ -1.79
NR1I3-224ENST00000507215 A0A1B0GUT8 65 aa3.86□□□□□ -1.79
NR1I3-224ENST00000507215 RPL32P62910 135 aaKnown RBP3.86□□□□□ -1.79
NR1I3-224ENST00000507215 Q6ZUT4 128 aa3.86□□□□□ -1.79
NR1I3-224ENST00000507215 FAM231DQ6ZW35 169 aa3.86□□□□□ -1.79
NR1I3-224ENST00000507215 C20orf78Q9BR46 151 aa3.86□□□□□ -1.79
NR1I3-224ENST00000507215 PPDPFQ9H3Y8 114 aa3.86□□□□□ -1.79
NR1I3-224ENST00000507215 LINC00862A6NCI5 91 aa3.85□□□□□ -1.79
NR1I3-224ENST00000507215 GATCO43716 136 aaKnown RBP3.85□□□□□ -1.79
NR1I3-224ENST00000507215 S100A1P23297 94 aa3.85□□□□□ -1.79
NR1I3-224ENST00000507215 RAB14P61106 215 aa3.85□□□□□ -1.79
NR1I3-224ENST00000507215 VAMP3Q15836 100 aa3.85□□□□□ -1.79
NR1I3-224ENST00000507215 C9orf129Q5T035 196 aaKnown RBP3.85□□□□□ -1.79
NR1I3-224ENST00000507215 LINC00242Q5T6M2 205 aa3.85□□□□□ -1.79
NR1I3-224ENST00000507215 MRPL55Q7Z7F7 128 aaKnown RBP3.85□□□□□ -1.79
NR1I3-224ENST00000507215 C22orf24Q9Y442 160 aa3.85□□□□□ -1.79
NR1I3-224ENST00000507215 HMSDA8MTL9 139 aa3.84□□□□□ -1.79
NR1I3-224ENST00000507215 ZNF727A8MUV8 499 aa3.84□□□□□ -1.79
NR1I3-224ENST00000507215 RAB4AP20338 218 aa3.84□□□□□ -1.79
NR1I3-224ENST00000507215 CKS1BP61024 79 aa3.84□□□□□ -1.79
NR1I3-224ENST00000507215 KIAA0087Q14695 138 aa3.84□□□□□ -1.79
NR1I3-224ENST00000507215 RNASE13Q5GAN3 156 aaKnown RBP3.84□□□□□ -1.79
NR1I3-224ENST00000507215 RETNLBQ9BQ08 111 aa3.84□□□□□ -1.79
NR1I3-224ENST00000507215 IGLV4-3A0A075B6K6 122 aa3.83□□□□□ -1.8
NR1I3-224ENST00000507215 TRBV24-1A0A075B6N3 115 aa3.83□□□□□ -1.8
NR1I3-224ENST00000507215 A0A1B0GW15 77 aa3.83□□□□□ -1.8
NR1I3-224ENST00000507215 KRTAP9-6A8MVA2 160 aa3.83□□□□□ -1.8
NR1I3-224ENST00000507215 IFI27P40305 119 aaPredicted RBP3.83□□□□□ -1.8
NR1I3-224ENST00000507215 UBE2AP49459 152 aa3.83□□□□□ -1.8
NR1I3-224ENST00000507215 RIGQ13278 110 aa3.83□□□□□ -1.8
NR1I3-224ENST00000507215 Q6ZVQ6 151 aa3.83□□□□□ -1.8
NR1I3-224ENST00000507215 LOC105371267A0A1B0GV96 52 aa3.82□□□□□ -1.8
NR1I3-224ENST00000507215 HIGD1CA8MV81 97 aa3.82□□□□□ -1.8
NR1I3-224ENST00000507215 TMEM250H0YL14 139 aa3.82□□□□□ -1.8
NR1I3-224ENST00000507215 K7EN84 100 aa3.82□□□□□ -1.8
NR1I3-224ENST00000507215 CXCL5P42830 114 aa3.82□□□□□ -1.8
NR1I3-224ENST00000507215 NDUFV3P56181 108 aaKnown RBP3.82□□□□□ -1.8
NR1I3-224ENST00000507215 NDUFA5Q16718 116 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 189 ms