RNA–Protein interactions for RNA: ENST00000506924.1

CLCN3-205, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 567 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-205ENST00000506924 ERASQ7Z444 233 aa6.06□□□□□ -1.44
CLCN3-205ENST00000506924 ORAOV1Q8WV07 137 aa6.06□□□□□ -1.44
CLCN3-205ENST00000506924 TIMM17AQ99595 171 aa6.06□□□□□ -1.44
CLCN3-205ENST00000506924 A0A096LNJ9 63 aa6.05□□□□□ -1.44
CLCN3-205ENST00000506924 A0A0J9YXV3 536 aa6.05□□□□□ -1.44
CLCN3-205ENST00000506924 COLCA2A8K830 154 aa6.05□□□□□ -1.44
CLCN3-205ENST00000506924 APOMO95445 188 aa6.05□□□□□ -1.44
CLCN3-205ENST00000506924 SPAG11BQ08648 103 aa6.05□□□□□ -1.44
CLCN3-205ENST00000506924 CIRBP-AS1Q8TBR5 109 aa6.05□□□□□ -1.44
CLCN3-205ENST00000506924 DPH3Q96FX2 82 aa6.05□□□□□ -1.44
CLCN3-205ENST00000506924 CARD19Q96LW7 228 aa6.05□□□□□ -1.44
CLCN3-205ENST00000506924 CHAC1Q9BUX1 264 aa6.05□□□□□ -1.44
CLCN3-205ENST00000506924 DNAH8Q96JB1 4490 aa6.05□□□□□ -1.44
CLCN3-205ENST00000506924 IGKV2-24A0A0C4DH68 120 aa6.04□□□□□ -1.44
CLCN3-205ENST00000506924 NDUFA6P56556 154 aa6.04□□□□□ -1.44
CLCN3-205ENST00000506924 SYCNQ0VAF6 134 aa6.04□□□□□ -1.44
CLCN3-205ENST00000506924 Q6ZRU5 148 aa6.04□□□□□ -1.44
CLCN3-205ENST00000506924 CAMK2N2Q96S95 79 aa6.04□□□□□ -1.44
CLCN3-205ENST00000506924 A0A087WZ39 114 aa6.03□□□□□ -1.44
CLCN3-205ENST00000506924 EPM2AB3EWF7 344 aa6.03□□□□□ -1.44
CLCN3-205ENST00000506924 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.03□□□□□ -1.44
CLCN3-205ENST00000506924 HBDP02042 147 aa6.03□□□□□ -1.44
CLCN3-205ENST00000506924 RAB5BP61020 215 aa6.03□□□□□ -1.44
CLCN3-205ENST00000506924 Q5VSD8 79 aa6.03□□□□□ -1.44
CLCN3-205ENST00000506924 BAGE3Q86Y29 109 aa6.03□□□□□ -1.44
CLCN3-205ENST00000506924 CST9LQ9H4G1 147 aa6.03□□□□□ -1.44
CLCN3-205ENST00000506924 A0A096LNI7 61 aa6.02□□□□□ -1.45
CLCN3-205ENST00000506924 MAJINQ3KP22 176 aa6.02□□□□□ -1.45
CLCN3-205ENST00000506924 UNQ6190/PRO20217Q6UXQ8 127 aa6.02□□□□□ -1.45
CLCN3-205ENST00000506924 OR10D4PQ8NGN7 298 aa6.02□□□□□ -1.45
CLCN3-205ENST00000506924 GEMIN7Q9H840 131 aaKnown RBP6.02□□□□□ -1.45
CLCN3-205ENST00000506924 TOMM7Q9P0U1 55 aa6.02□□□□□ -1.45
CLCN3-205ENST00000506924 CDKN2A-AS1Q9UH64 79 aa6.02□□□□□ -1.45
CLCN3-205ENST00000506924 ABCA13Q86UQ4 5058 aa6.01□□□□□ -1.45
CLCN3-205ENST00000506924 HERVK_113P63121 156 aa6.01□□□□□ -1.45
CLCN3-205ENST00000506924 GAGE2BQ13066 116 aa6.01□□□□□ -1.45
CLCN3-205ENST00000506924 PMVKQ15126 192 aa6.01□□□□□ -1.45
CLCN3-205ENST00000506924 PDZD11Q5EBL8 140 aa6.01□□□□□ -1.45
CLCN3-205ENST00000506924 C2orf82Q6UX34 121 aa6.01□□□□□ -1.45
CLCN3-205ENST00000506924 FAM19A2Q8N3H0 131 aa6.01□□□□□ -1.45
CLCN3-205ENST00000506924 LINC00469Q8N7U9 141 aa6.01□□□□□ -1.45
CLCN3-205ENST00000506924 SPACA4Q8TDM5 124 aa6.01□□□□□ -1.45
CLCN3-205ENST00000506924 A0A087WYN8 130 aa6□□□□□ -1.45
CLCN3-205ENST00000506924 LINC01549A6NIU2 74 aa6□□□□□ -1.45
CLCN3-205ENST00000506924 KIAA0087Q14695 138 aa6□□□□□ -1.45
CLCN3-205ENST00000506924 FAM19A3Q7Z5A8 133 aa6□□□□□ -1.45
CLCN3-205ENST00000506924 CHCHD1Q96BP2 118 aaKnown RBP6□□□□□ -1.45
CLCN3-205ENST00000506924 C2orf48Q96LS8 159 aa6□□□□□ -1.45
CLCN3-205ENST00000506924 PCLOQ9Y6V0 5065 aa6□□□□□ -1.45
CLCN3-205ENST00000506924 TINCRA0A1B0GVN0 87 aa5.99□□□□□ -1.45
CLCN3-205ENST00000506924 NDUFA1O15239 70 aa5.99□□□□□ -1.45
CLCN3-205ENST00000506924 NUPR1O60356 82 aa5.99□□□□□ -1.45
CLCN3-205ENST00000506924 SERF1AO75920 110 aa5.99□□□□□ -1.45
CLCN3-205ENST00000506924 SPINK8P0C7L1 97 aa5.99□□□□□ -1.45
CLCN3-205ENST00000506924 SEC11AP67812 179 aa5.99□□□□□ -1.45
CLCN3-205ENST00000506924 RPL18AQ02543 176 aaKnown RBP5.99□□□□□ -1.45
CLCN3-205ENST00000506924 CIRBPQ14011 172 aaKnown RBP5.99□□□□□ -1.45
CLCN3-205ENST00000506924 STPG4Q8N801 248 aa5.99□□□□□ -1.45
CLCN3-205ENST00000506924 PACRGQ96M98 296 aaPredicted RBP5.99□□□□□ -1.45
CLCN3-205ENST00000506924 FAT1Q14517 4588 aa5.99□□□□□ -1.45
CLCN3-205ENST00000506924 LOC107984640A0A0U1RRK4 108 aa5.98□□□□□ -1.45
CLCN3-205ENST00000506924 HSBP1O75506 76 aa5.98□□□□□ -1.45
CLCN3-205ENST00000506924 ATP5LO75964 103 aa5.98□□□□□ -1.45
CLCN3-205ENST00000506924 C9orf116Q5BN46 136 aaPredicted RBP5.98□□□□□ -1.45
CLCN3-205ENST00000506924 C6orf48Q9UBA6 75 aa5.98□□□□□ -1.45
CLCN3-205ENST00000506924 SMIM1B2RUZ4 78 aa5.97□□□□□ -1.45
CLCN3-205ENST00000506924 H0Y8G0 127 aa5.97□□□□□ -1.45
CLCN3-205ENST00000506924 CKS1BP61024 79 aa5.97□□□□□ -1.45
CLCN3-205ENST00000506924 GAGE2EQ4V326 116 aa5.97□□□□□ -1.45
CLCN3-205ENST00000506924 C6orf226Q5I0X4 101 aa5.97□□□□□ -1.45
CLCN3-205ENST00000506924 GAGE2AQ6NT46 116 aa5.97□□□□□ -1.45
CLCN3-205ENST00000506924 LINC01561Q8N1V8 128 aa5.97□□□□□ -1.45
CLCN3-205ENST00000506924 IFI27L1Q96BM0 104 aa5.97□□□□□ -1.45
CLCN3-205ENST00000506924 MRPL35Q9NZE8 188 aaKnown RBP5.97□□□□□ -1.45
CLCN3-205ENST00000506924 GAGE2DQ9UEU5 116 aa5.97□□□□□ -1.45
CLCN3-205ENST00000506924 IGLV5-45A0A087WSX0 123 aa5.96□□□□□ -1.46
CLCN3-205ENST00000506924 KRTAP29-1A8MX34 341 aaPredicted RBP5.96□□□□□ -1.46
CLCN3-205ENST00000506924 INAFM2P0DMQ5 153 aa5.96□□□□□ -1.46
CLCN3-205ENST00000506924 IGLC3P0DOY3 106 aa5.96□□□□□ -1.46
CLCN3-205ENST00000506924 FABP4P15090 132 aa5.96□□□□□ -1.46
CLCN3-205ENST00000506924 Q8IZM0 81 aa5.96□□□□□ -1.46
CLCN3-205ENST00000506924 PLAC8Q9NZF1 115 aa5.96□□□□□ -1.46
CLCN3-205ENST00000506924 CHTOPQ9Y3Y2 248 aaKnown RBP5.96□□□□□ -1.46
CLCN3-205ENST00000506924 C11orf86A6NJI1 115 aa5.95□□□□□ -1.46
CLCN3-205ENST00000506924 ZNF22P17026 224 aaPredicted RBP5.95□□□□□ -1.46
CLCN3-205ENST00000506924 Q6ZRP5 223 aa5.95□□□□□ -1.46
CLCN3-205ENST00000506924 Q75L30 129 aa5.95□□□□□ -1.46
CLCN3-205ENST00000506924 COX7B2Q8TF08 81 aa5.95□□□□□ -1.46
CLCN3-205ENST00000506924 VPS13BQ7Z7G8 4022 aa5.95□□□□□ -1.46
CLCN3-205ENST00000506924 A0A1W2PNN7 141 aa5.94□□□□□ -1.46
CLCN3-205ENST00000506924 F8WDY8 70 aa5.94□□□□□ -1.46
CLCN3-205ENST00000506924 H3BRM9 83 aa5.94□□□□□ -1.46
CLCN3-205ENST00000506924 HIST1H2BKO60814 126 aa5.94□□□□□ -1.46
CLCN3-205ENST00000506924 ATP6V1G1O75348 118 aa5.94□□□□□ -1.46
CLCN3-205ENST00000506924 LEPROTL1O95214 131 aa5.94□□□□□ -1.46
CLCN3-205ENST00000506924 HIST1H2BJP06899 126 aa5.94□□□□□ -1.46
CLCN3-205ENST00000506924 HIST1H2BOP23527 126 aa5.94□□□□□ -1.46
CLCN3-205ENST00000506924 HIST1H2BBP33778 126 aa5.94□□□□□ -1.46
CLCN3-205ENST00000506924 HIST1H2BDP58876 126 aa5.94□□□□□ -1.46
CLCN3-205ENST00000506924 RPL37AP61513 92 aaKnown RBP5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms