RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 TRBV6-8A0A0A6YYG3 113 aa11.89□□□□□ -0.51
SQSTM1-211ENST00000506690 UBR5O95071 2799 aaPredicted RBP11.89□□□□□ -0.51
SQSTM1-211ENST00000506690 KRTAP10-9P60411 292 aa11.88□□□□□ -0.51
SQSTM1-211ENST00000506690 C6orf226Q5I0X4 101 aa11.88□□□□□ -0.51
SQSTM1-211ENST00000506690 PLAC8L1A1L4L8 177 aa11.88□□□□□ -0.51
SQSTM1-211ENST00000506690 J3QLI3 93 aa11.88□□□□□ -0.51
SQSTM1-211ENST00000506690 C20orf197Q8N268 126 aa11.88□□□□□ -0.51
SQSTM1-211ENST00000506690 MXRA5Q9NR99 2828 aa11.88□□□□□ -0.51
SQSTM1-211ENST00000506690 CHD6Q8TD26 2715 aa11.87□□□□□ -0.51
SQSTM1-211ENST00000506690 XCL1P47992 114 aa11.87□□□□□ -0.51
SQSTM1-211ENST00000506690 TMEM86BQ8N661 226 aa11.87□□□□□ -0.51
SQSTM1-211ENST00000506690 UBL5Q9BZL1 73 aa11.87□□□□□ -0.51
SQSTM1-211ENST00000506690 EPM2AB3EWF7 344 aa11.87□□□□□ -0.51
SQSTM1-211ENST00000506690 LINC00959A0A1B0GUT2 108 aa11.86□□□□□ -0.51
SQSTM1-211ENST00000506690 TRGV2A0A075B6R0 118 aa11.86□□□□□ -0.51
SQSTM1-211ENST00000506690 C11orf68Q9H3H3 251 aaKnown RBP11.86□□□□□ -0.51
SQSTM1-211ENST00000506690 FAM236DA0A1B0GTK5 79 aa11.85□□□□□ -0.51
SQSTM1-211ENST00000506690 FAM236CP0DP71 79 aa11.85□□□□□ -0.51
SQSTM1-211ENST00000506690 FBN2P35556 2912 aa11.85□□□□□ -0.51
SQSTM1-211ENST00000506690 ZANQ9Y493 2812 aa11.85□□□□□ -0.51
SQSTM1-211ENST00000506690 FSHBP01225 129 aa11.85□□□□□ -0.51
SQSTM1-211ENST00000506690 BCE1O60756 84 aa11.84□□□□□ -0.51
SQSTM1-211ENST00000506690 PRR3P79522 188 aaKnown RBP11.84□□□□□ -0.51
SQSTM1-211ENST00000506690 KHDC1LQ5JSQ8 128 aa11.84□□□□□ -0.51
SQSTM1-211ENST00000506690 ANKRD17O75179 2603 aaKnown RBP11.84□□□□□ -0.51
SQSTM1-211ENST00000506690 POLQO75417 2590 aa11.84□□□□□ -0.51
SQSTM1-211ENST00000506690 NOTCH3Q9UM47 2321 aa11.84□□□□□ -0.51
SQSTM1-211ENST00000506690 Q8IZM0 81 aa11.84□□□□□ -0.51
SQSTM1-211ENST00000506690 A0A1W2PRX2 142 aa11.83□□□□□ -0.52
SQSTM1-211ENST00000506690 H7BZZ5 65 aa11.83□□□□□ -0.52
SQSTM1-211ENST00000506690 C16orf74Q96GX8 76 aa11.83□□□□□ -0.52
SQSTM1-211ENST00000506690 TRGV4A0A0C4DH28 118 aa11.82□□□□□ -0.52
SQSTM1-211ENST00000506690 GIG44P09565 113 aaPredicted RBP11.82□□□□□ -0.52
SQSTM1-211ENST00000506690 C11orf44Q8N8P7 122 aa11.82□□□□□ -0.52
SQSTM1-211ENST00000506690 CENPEQ02224 2701 aa11.82□□□□□ -0.52
SQSTM1-211ENST00000506690 TRAV7A0A075B6U4 112 aa11.81□□□□□ -0.52
SQSTM1-211ENST00000506690 DEFB113Q30KQ7 82 aa11.8□□□□□ -0.52
SQSTM1-211ENST00000506690 Q6ZQT0 140 aa11.8□□□□□ -0.52
SQSTM1-211ENST00000506690 SERP1Q9Y6X1 66 aa11.8□□□□□ -0.52
SQSTM1-211ENST00000506690 KMT2BQ9UMN6 2715 aaPredicted RBP11.8□□□□□ -0.52
SQSTM1-211ENST00000506690 USP9YO00507 2555 aaPredicted RBP11.8□□□□□ -0.52
SQSTM1-211ENST00000506690 NBPF19A0A087WUL8 3843 aa11.8□□□□□ -0.52
SQSTM1-211ENST00000506690 PTPN13Q12923 2485 aa11.78□□□□□ -0.52
SQSTM1-211ENST00000506690 LOC110117498A0A087WWA1 95 aa11.78□□□□□ -0.52
SQSTM1-211ENST00000506690 KLKP1Q107X0 134 aa11.78□□□□□ -0.52
SQSTM1-211ENST00000506690 MRAPQ8TCY5 172 aa11.78□□□□□ -0.52
SQSTM1-211ENST00000506690 CUBNO60494 3623 aa11.78□□□□□ -0.52
SQSTM1-211ENST00000506690 AKAP9Q99996 3911 aa11.78□□□□□ -0.52
SQSTM1-211ENST00000506690 IGHV4-31P0DP07 118 aa11.77□□□□□ -0.52
SQSTM1-211ENST00000506690 RBM3P98179 157 aaKnown RBP11.77□□□□□ -0.52
SQSTM1-211ENST00000506690 LINC00482Q8N8I6 264 aa11.77□□□□□ -0.52
SQSTM1-211ENST00000506690 RNASE1P07998 156 aaKnown RBP11.77□□□□□ -0.53
SQSTM1-211ENST00000506690 C6orf99Q4VX62 202 aa11.77□□□□□ -0.53
SQSTM1-211ENST00000506690 LINC00575Q6W349 94 aa11.77□□□□□ -0.53
SQSTM1-211ENST00000506690 LINC01547P58512 204 aaPredicted RBP11.76□□□□□ -0.53
SQSTM1-211ENST00000506690 COX17Q14061 63 aa11.76□□□□□ -0.53
SQSTM1-211ENST00000506690 MYO9AB2RTY4 2548 aa11.76□□□□□ -0.53
SQSTM1-211ENST00000506690 PLA2G2AP14555 144 aa11.75□□□□□ -0.53
SQSTM1-211ENST00000506690 ZNF561-AS1K7EIQ3 104 aa11.75□□□□□ -0.53
SQSTM1-211ENST00000506690 ABCA12Q86UK0 2595 aa11.74□□□□□ -0.53
SQSTM1-211ENST00000506690 A0A1B0GUV1 79 aa11.74□□□□□ -0.53
SQSTM1-211ENST00000506690 J3QKU1 62 aa11.74□□□□□ -0.53
SQSTM1-211ENST00000506690 KIAA0087Q14695 138 aa11.74□□□□□ -0.53
SQSTM1-211ENST00000506690 C6orf223Q8N319 242 aa11.74□□□□□ -0.53
SQSTM1-211ENST00000506690 M0R2N4 97 aa11.74□□□□□ -0.53
SQSTM1-211ENST00000506690 TENM4Q6N022 2769 aa11.73□□□□□ -0.53
SQSTM1-211ENST00000506690 CSNK1G2-AS1Q8NCQ2 148 aa11.73□□□□□ -0.53
SQSTM1-211ENST00000506690 CR1P17927 2039 aa11.73□□□□□ -0.53
SQSTM1-211ENST00000506690 NAV2Q8IVL1 2488 aa11.73□□□□□ -0.53
SQSTM1-211ENST00000506690 TRAV10A0A0B4J240 114 aa11.72□□□□□ -0.53
SQSTM1-211ENST00000506690 Q6ZVQ6 151 aa11.72□□□□□ -0.53
SQSTM1-211ENST00000506690 Q8NDZ9 215 aa11.72□□□□□ -0.53
SQSTM1-211ENST00000506690 WNK1Q9H4A3 2382 aa11.72□□□□□ -0.53
SQSTM1-211ENST00000506690 IGHV4-28A0A0C4DH34 117 aa11.71□□□□□ -0.54
SQSTM1-211ENST00000506690 CXCL6P80162 114 aa11.7□□□□□ -0.54
SQSTM1-211ENST00000506690 HAMPP81172 84 aa11.7□□□□□ -0.54
SQSTM1-211ENST00000506690 CLPSL2Q6UWE3 100 aa11.7□□□□□ -0.54
SQSTM1-211ENST00000506690 SETXQ7Z333 2677 aaKnown RBP11.7□□□□□ -0.54
SQSTM1-211ENST00000506690 WFDC10AQ9H1F0 79 aa11.69□□□□□ -0.54
SQSTM1-211ENST00000506690 LAMTOR3Q9UHA4 124 aa11.69□□□□□ -0.54
SQSTM1-211ENST00000506690 RPL35AP18077 110 aaKnown RBP11.69□□□□□ -0.54
SQSTM1-211ENST00000506690 LINC00336Q6ZUF6 198 aa11.69□□□□□ -0.54
SQSTM1-211ENST00000506690 RMI2Q96E14 147 aa11.69□□□□□ -0.54
SQSTM1-211ENST00000506690 CMC4P56277 68 aaPredicted RBP11.68□□□□□ -0.54
SQSTM1-211ENST00000506690 C9orf66Q5T8R8 295 aa11.68□□□□□ -0.54
SQSTM1-211ENST00000506690 PRO0628Q9UI54 55 aa11.68□□□□□ -0.54
SQSTM1-211ENST00000506690 SNURFQ9Y675 71 aa11.68□□□□□ -0.54
SQSTM1-211ENST00000506690 TLN2Q9Y4G6 2542 aa11.68□□□□□ -0.54
SQSTM1-211ENST00000506690 CCL24O00175 119 aa11.68□□□□□ -0.54
SQSTM1-211ENST00000506690 C9orf116Q5BN46 136 aaPredicted RBP11.68□□□□□ -0.54
SQSTM1-211ENST00000506690 KRTAP1-3Q8IUG1 177 aa11.68□□□□□ -0.54
SQSTM1-211ENST00000506690 C16orf95Q9H693 158 aa11.67□□□□□ -0.54
SQSTM1-211ENST00000506690 JMJD1CQ15652 2540 aa11.67□□□□□ -0.54
SQSTM1-211ENST00000506690 PDE6GP18545 87 aa11.67□□□□□ -0.54
SQSTM1-211ENST00000506690 F8WEM9 126 aa11.66□□□□□ -0.54
SQSTM1-211ENST00000506690 CD164L2Q6UWJ8 174 aa11.66□□□□□ -0.54
SQSTM1-211ENST00000506690 FP248Q71RG6 208 aaPredicted RBP11.66□□□□□ -0.54
SQSTM1-211ENST00000506690 C19orf73Q9NVV2 129 aa11.66□□□□□ -0.54
SQSTM1-211ENST00000506690 SMIM26A0A096LP01 95 aa11.66□□□□□ -0.54
SQSTM1-211ENST00000506690 GYPEP15421 78 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms