RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 SPANXDQ9BXN6 97 aa0.39□□□□□ -2.35
TOPBP1-204ENST00000505804 CYP4F30PQ9H0H9 118 aa0.39□□□□□ -2.35
TOPBP1-204ENST00000505804 SCP2D1Q9UJQ7 156 aa0.39□□□□□ -2.35
TOPBP1-204ENST00000505804 IER3IP1Q9Y5U9 82 aa0.39□□□□□ -2.35
TOPBP1-204ENST00000505804 FRAS1Q86XX4 4008 aa0.39□□□□□ -2.35
TOPBP1-204ENST00000505804 DNAH7Q8WXX0 4024 aa0.39□□□□□ -2.35
TOPBP1-204ENST00000505804 CACNA1EQ15878 2313 aa0.39□□□□□ -2.35
TOPBP1-204ENST00000505804 THOC2Q8NI27 1593 aaKnown RBP0.39□□□□□ -2.35
TOPBP1-204ENST00000505804 SCN7AQ01118 1682 aa0.39□□□□□ -2.35
TOPBP1-204ENST00000505804 PKHD1P08F94 4074 aa0.39□□□□□ -2.35
TOPBP1-204ENST00000505804 AKAP12Q02952 1782 aa0.39□□□□□ -2.35
TOPBP1-204ENST00000505804 KDM3BQ7LBC6 1761 aa0.39□□□□□ -2.35
TOPBP1-204ENST00000505804 FAT1Q14517 4588 aa0.39□□□□□ -2.35
TOPBP1-204ENST00000505804 DOCK11Q5JSL3 2073 aa0.39□□□□□ -2.35
TOPBP1-204ENST00000505804 ARHGAP5Q13017 1502 aa0.38□□□□□ -2.35
TOPBP1-204ENST00000505804 ZMYM4Q5VZL5 1548 aa0.38□□□□□ -2.35
TOPBP1-204ENST00000505804 PLXNB2O15031 1838 aa0.38□□□□□ -2.35
TOPBP1-204ENST00000505804 COL4A6Q14031 1691 aa0.38□□□□□ -2.35
TOPBP1-204ENST00000505804 PRKDCP78527 4128 aaKnown RBP0.38□□□□□ -2.35
TOPBP1-204ENST00000505804 UBE2L5PA0A1B0GUS4 154 aa0.38□□□□□ -2.35
TOPBP1-204ENST00000505804 TMEM14DPA8MWL7 114 aa0.38□□□□□ -2.35
TOPBP1-204ENST00000505804 SSSCA1O60232 199 aa0.38□□□□□ -2.35
TOPBP1-204ENST00000505804 PPP1R17O96001 155 aa0.38□□□□□ -2.35
TOPBP1-204ENST00000505804 S100PP25815 95 aa0.38□□□□□ -2.35
TOPBP1-204ENST00000505804 UBE2L3P68036 154 aaKnown RBP0.38□□□□□ -2.35
TOPBP1-204ENST00000505804 LENEPQ9Y5L5 61 aa0.38□□□□□ -2.35
TOPBP1-204ENST00000505804 APOBP04114 4563 aaKnown RBP0.38□□□□□ -2.35
TOPBP1-204ENST00000505804 DNAH9Q9NYC9 4486 aa0.38□□□□□ -2.35
TOPBP1-204ENST00000505804 BTAF1O14981 1849 aa0.38□□□□□ -2.35
TOPBP1-204ENST00000505804 LRRC37A2A6NM11 1700 aa0.38□□□□□ -2.35
TOPBP1-204ENST00000505804 C10orf71Q711Q0 1435 aa0.38□□□□□ -2.35
TOPBP1-204ENST00000505804 DOPEY2Q9Y3R5 2298 aa0.38□□□□□ -2.35
TOPBP1-204ENST00000505804 C20orf202A1L168 122 aa0.37□□□□□ -2.35
TOPBP1-204ENST00000505804 FAM24AA6NFZ4 105 aa0.37□□□□□ -2.35
TOPBP1-204ENST00000505804 SMIM6P0DI80 62 aa0.37□□□□□ -2.35
TOPBP1-204ENST00000505804 IFITM1P13164 125 aa0.37□□□□□ -2.35
TOPBP1-204ENST00000505804 ATP5EP56381 51 aaPredicted RBP0.37□□□□□ -2.35
TOPBP1-204ENST00000505804 Q5VV11 94 aa0.37□□□□□ -2.35
TOPBP1-204ENST00000505804 Q6ZRX8 168 aa0.37□□□□□ -2.35
TOPBP1-204ENST00000505804 SVBPQ8N300 66 aa0.37□□□□□ -2.35
TOPBP1-204ENST00000505804 TSLPQ969D9 159 aa0.37□□□□□ -2.35
TOPBP1-204ENST00000505804 TCEAL7Q9BRU2 100 aa0.37□□□□□ -2.35
TOPBP1-204ENST00000505804 DPH3P1Q9H4G8 78 aa0.37□□□□□ -2.35
TOPBP1-204ENST00000505804 CSMD3Q7Z407 3707 aa0.37□□□□□ -2.35
TOPBP1-204ENST00000505804 NUP188Q5SRE5 1749 aa0.37□□□□□ -2.35
TOPBP1-204ENST00000505804 ANKRD26Q9UPS8 1709 aa0.37□□□□□ -2.35
TOPBP1-204ENST00000505804 APC2O95996 2303 aa0.37□□□□□ -2.35
TOPBP1-204ENST00000505804 SCAPERQ9BY12 1400 aa0.37□□□□□ -2.35
TOPBP1-204ENST00000505804 CMYA5Q8N3K9 4069 aa0.37□□□□□ -2.35
TOPBP1-204ENST00000505804 DIP2AQ14689 1571 aa0.36□□□□□ -2.35
TOPBP1-204ENST00000505804 DIP2CQ9Y2E4 1556 aa0.36□□□□□ -2.35
TOPBP1-204ENST00000505804 ANK2Q01484 3957 aa0.36□□□□□ -2.35
TOPBP1-204ENST00000505804 TACC2O95359 2948 aa0.36□□□□□ -2.35
TOPBP1-204ENST00000505804 HSPG2P98160 4391 aa0.36□□□□□ -2.35
TOPBP1-204ENST00000505804 ALMS1Q8TCU4 4167 aa0.36□□□□□ -2.35
TOPBP1-204ENST00000505804 TRBV7-3A0A075B6L6 115 aa0.36□□□□□ -2.35
TOPBP1-204ENST00000505804 G3V318 75 aa0.36□□□□□ -2.35
TOPBP1-204ENST00000505804 GCHFRP30047 84 aa0.36□□□□□ -2.35
TOPBP1-204ENST00000505804 SPINK7P58062 85 aa0.36□□□□□ -2.35
TOPBP1-204ENST00000505804 GTF2H5Q6ZYL4 71 aa0.36□□□□□ -2.35
TOPBP1-204ENST00000505804 BAGE3Q86Y29 109 aa0.36□□□□□ -2.35
TOPBP1-204ENST00000505804 MYOZ3Q8TDC0 251 aa0.36□□□□□ -2.35
TOPBP1-204ENST00000505804 C14orf144Q96I85 54 aa0.36□□□□□ -2.35
TOPBP1-204ENST00000505804 C12orf57Q99622 126 aa0.36□□□□□ -2.35
TOPBP1-204ENST00000505804 MGST2Q99735 147 aa0.36□□□□□ -2.35
TOPBP1-204ENST00000505804 SMR3AQ99954 134 aa0.36□□□□□ -2.35
TOPBP1-204ENST00000505804 NDUFA4L2Q9NRX3 87 aa0.36□□□□□ -2.35
TOPBP1-204ENST00000505804 LINC00474Q9P2X8 69 aa0.36□□□□□ -2.35
TOPBP1-204ENST00000505804 R4GMQ9 66 aa0.36□□□□□ -2.35
TOPBP1-204ENST00000505804 V9GYH0 126 aa0.36□□□□□ -2.35
TOPBP1-204ENST00000505804 DNAH5Q8TE73 4624 aa0.35□□□□□ -2.35
TOPBP1-204ENST00000505804 DCAF1Q9Y4B6 1507 aa0.35□□□□□ -2.35
TOPBP1-204ENST00000505804 M0R135 149 aa0.35□□□□□ -2.35
TOPBP1-204ENST00000505804 DCDP81605 110 aaKnown RBP0.35□□□□□ -2.35
TOPBP1-204ENST00000505804 SPAG11BQ08648 103 aa0.35□□□□□ -2.35
TOPBP1-204ENST00000505804 HSD52Q0P140 79 aa0.35□□□□□ -2.35
TOPBP1-204ENST00000505804 CFAP126Q5VTH2 177 aa0.35□□□□□ -2.35
TOPBP1-204ENST00000505804 SPAG11AQ6PDA7 123 aa0.35□□□□□ -2.35
TOPBP1-204ENST00000505804 PROK2Q9HC23 129 aa0.35□□□□□ -2.35
TOPBP1-204ENST00000505804 DYNLRB1Q9NP97 96 aa0.35□□□□□ -2.35
TOPBP1-204ENST00000505804 PLAC8Q9NZF1 115 aa0.35□□□□□ -2.35
TOPBP1-204ENST00000505804 MYO7AQ13402 2215 aa0.35□□□□□ -2.35
TOPBP1-204ENST00000505804 ZNF609O15014 1411 aa0.35□□□□□ -2.35
TOPBP1-204ENST00000505804 EEA1Q15075 1411 aa0.35□□□□□ -2.35
TOPBP1-204ENST00000505804 RB1CC1Q8TDY2 1594 aa0.35□□□□□ -2.35
TOPBP1-204ENST00000505804 BIVM-ERCC5R4GMW8 1640 aa0.35□□□□□ -2.35
TOPBP1-204ENST00000505804 CADP27708 2225 aa0.34□□□□□ -2.35
TOPBP1-204ENST00000505804 SPTBN1Q01082 2364 aaKnown RBP0.34□□□□□ -2.35
TOPBP1-204ENST00000505804 CPS1P31327 1500 aa0.34□□□□□ -2.35
TOPBP1-204ENST00000505804 CFAP43Q8NDM7 1665 aa0.34□□□□□ -2.35
TOPBP1-204ENST00000505804 TRRAPQ9Y4A5 3859 aa0.34□□□□□ -2.35
TOPBP1-204ENST00000505804 ATP6V1G2-DDX39BF2Z307 99 aa0.34□□□□□ -2.36
TOPBP1-204ENST00000505804 HMGN4O00479 90 aa0.34□□□□□ -2.36
TOPBP1-204ENST00000505804 NMBP08949 121 aa0.34□□□□□ -2.36
TOPBP1-204ENST00000505804 SPINK8P0C7L1 97 aa0.34□□□□□ -2.36
TOPBP1-204ENST00000505804 LELP1Q5T871 98 aa0.34□□□□□ -2.36
TOPBP1-204ENST00000505804 FAM213BQ8TBF2 198 aa0.34□□□□□ -2.36
TOPBP1-204ENST00000505804 AMELXQ99217 191 aa0.34□□□□□ -2.36
TOPBP1-204ENST00000505804 CNTLNQ9NXG0 1405 aa0.34□□□□□ -2.36
TOPBP1-204ENST00000505804 DIP2BQ9P265 1576 aa0.34□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms