RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 CEP152O94986 1710 aa-0.16□□□□□ -2.44
HMGB1P29-201ENST00000505659 CEP250Q9BV73 2442 aa-0.16□□□□□ -2.44
HMGB1P29-201ENST00000505659 ZNF236Q9UL36 1845 aa-0.17□□□□□ -2.44
HMGB1P29-201ENST00000505659 TRAV13-2A0A0B4J235 113 aa-0.17□□□□□ -2.44
HMGB1P29-201ENST00000505659 CTXND1A0A1B0GTU2 59 aa-0.17□□□□□ -2.44
HMGB1P29-201ENST00000505659 LINC00959A0A1B0GUT2 108 aa-0.17□□□□□ -2.44
HMGB1P29-201ENST00000505659 K7EP34 96 aa-0.17□□□□□ -2.44
HMGB1P29-201ENST00000505659 DCDP81605 110 aaKnown RBP-0.17□□□□□ -2.44
HMGB1P29-201ENST00000505659 KRTAP19-2Q3LHN2 52 aa-0.17□□□□□ -2.44
HMGB1P29-201ENST00000505659 SPAG11AQ6PDA7 123 aa-0.17□□□□□ -2.44
HMGB1P29-201ENST00000505659 DPH3Q96FX2 82 aa-0.17□□□□□ -2.44
HMGB1P29-201ENST00000505659 CDK5RAP2Q96SN8 1893 aa-0.17□□□□□ -2.44
HMGB1P29-201ENST00000505659 AGPAT4-IT1Q9H0P7 198 aa-0.17□□□□□ -2.44
HMGB1P29-201ENST00000505659 PRO3102Q9H379 93 aa-0.17□□□□□ -2.44
HMGB1P29-201ENST00000505659 LENEPQ9Y5L5 61 aa-0.17□□□□□ -2.44
HMGB1P29-201ENST00000505659 GRIN2AQ12879 1464 aa-0.17□□□□□ -2.44
HMGB1P29-201ENST00000505659 MYH9P35579 1960 aaKnown RBP-0.17□□□□□ -2.44
HMGB1P29-201ENST00000505659 PPRC1Q5VV67 1664 aaKnown RBP-0.18□□□□□ -2.44
HMGB1P29-201ENST00000505659 NWD2Q9ULI1 1742 aa-0.18□□□□□ -2.44
HMGB1P29-201ENST00000505659 ERCC6L2Q5T890 1561 aa-0.18□□□□□ -2.44
HMGB1P29-201ENST00000505659 MYH13Q9UKX3 1938 aa-0.18□□□□□ -2.44
HMGB1P29-201ENST00000505659 C20orf202A1L168 122 aa-0.18□□□□□ -2.44
HMGB1P29-201ENST00000505659 HCG22E2RYF7 251 aa-0.18□□□□□ -2.44
HMGB1P29-201ENST00000505659 M0R135 149 aa-0.18□□□□□ -2.44
HMGB1P29-201ENST00000505659 SPRR1AP35321 89 aa-0.18□□□□□ -2.44
HMGB1P29-201ENST00000505659 RPS29P62273 56 aaKnown RBP-0.18□□□□□ -2.44
HMGB1P29-201ENST00000505659 PRLHP81277 87 aa-0.18□□□□□ -2.44
HMGB1P29-201ENST00000505659 DEFB112Q30KQ8 113 aa-0.18□□□□□ -2.44
HMGB1P29-201ENST00000505659 DEFB110Q30KQ9 67 aa-0.18□□□□□ -2.44
HMGB1P29-201ENST00000505659 H1FX-AS1Q4G0G2 97 aa-0.18□□□□□ -2.44
HMGB1P29-201ENST00000505659 C10orf128Q5T292 105 aa-0.18□□□□□ -2.44
HMGB1P29-201ENST00000505659 RPS27LQ71UM5 84 aaKnown RBP-0.18□□□□□ -2.44
HMGB1P29-201ENST00000505659 DEFB104AQ8WTQ1 72 aa-0.18□□□□□ -2.44
HMGB1P29-201ENST00000505659 AMELXQ99217 191 aa-0.18□□□□□ -2.44
HMGB1P29-201ENST00000505659 SDF2Q99470 211 aa-0.18□□□□□ -2.44
HMGB1P29-201ENST00000505659 PDCD10Q9BUL8 212 aa-0.18□□□□□ -2.44
HMGB1P29-201ENST00000505659 FXYD6Q9H0Q3 95 aa-0.18□□□□□ -2.44
HMGB1P29-201ENST00000505659 TP53AIP1Q9HCN2 124 aa-0.18□□□□□ -2.44
HMGB1P29-201ENST00000505659 V9GYH0 126 aa-0.18□□□□□ -2.44
HMGB1P29-201ENST00000505659 MRC1P22897 1456 aa-0.18□□□□□ -2.44
HMGB1P29-201ENST00000505659 LRRC37A2A6NM11 1700 aa-0.18□□□□□ -2.44
HMGB1P29-201ENST00000505659 PHLPP1O60346 1717 aa-0.18□□□□□ -2.44
HMGB1P29-201ENST00000505659 KNDC1Q76NI1 1749 aa-0.18□□□□□ -2.44
HMGB1P29-201ENST00000505659 FMN2Q9NZ56 1722 aa-0.18□□□□□ -2.44
HMGB1P29-201ENST00000505659 CDC42BPGQ6DT37 1551 aa-0.19□□□□□ -2.44
HMGB1P29-201ENST00000505659 TROQ12816 1431 aaPredicted RBP-0.19□□□□□ -2.44
HMGB1P29-201ENST00000505659 PPIP5K1Q6PFW1 1433 aa-0.19□□□□□ -2.44
HMGB1P29-201ENST00000505659 C10orf71Q711Q0 1435 aa-0.19□□□□□ -2.44
HMGB1P29-201ENST00000505659 LRP6O75581 1613 aa-0.19□□□□□ -2.44
HMGB1P29-201ENST00000505659 A0A087WVE0 104 aa-0.19□□□□□ -2.44
HMGB1P29-201ENST00000505659 FXYD6-FXYD2A0A087WZ82 144 aa-0.19□□□□□ -2.44
HMGB1P29-201ENST00000505659 BCE1O60756 84 aa-0.19□□□□□ -2.44
HMGB1P29-201ENST00000505659 APOC3P02656 99 aa-0.19□□□□□ -2.44
HMGB1P29-201ENST00000505659 SPART-AS1P0CW21 52 aa-0.19□□□□□ -2.44
HMGB1P29-201ENST00000505659 ARPC4P59998 168 aa-0.19□□□□□ -2.44
HMGB1P29-201ENST00000505659 DEFB135Q30KP9 77 aa-0.19□□□□□ -2.44
HMGB1P29-201ENST00000505659 PIGYQ3MUY2 71 aa-0.19□□□□□ -2.44
HMGB1P29-201ENST00000505659 CLPSL2Q6UWE3 100 aa-0.19□□□□□ -2.44
HMGB1P29-201ENST00000505659 TTC9CQ8N5M4 171 aa-0.19□□□□□ -2.44
HMGB1P29-201ENST00000505659 RERGLQ9H628 205 aa-0.19□□□□□ -2.44
HMGB1P29-201ENST00000505659 LINC00472Q9H8W2 130 aa-0.19□□□□□ -2.44
HMGB1P29-201ENST00000505659 CRIPTQ9P021 101 aa-0.19□□□□□ -2.44
HMGB1P29-201ENST00000505659 APLNQ9ULZ1 77 aa-0.19□□□□□ -2.44
HMGB1P29-201ENST00000505659 CFTRP13569 1480 aa-0.19□□□□□ -2.44
HMGB1P29-201ENST00000505659 IQSEC2Q5JU85 1478 aa-0.19□□□□□ -2.44
HMGB1P29-201ENST00000505659 BCL9LQ86UU0 1499 aa-0.19□□□□□ -2.44
HMGB1P29-201ENST00000505659 UBR3Q6ZT12 1888 aa-0.19□□□□□ -2.44
HMGB1P29-201ENST00000505659 MYH7P12883 1935 aa-0.19□□□□□ -2.44
HMGB1P29-201ENST00000505659 TIAM2Q8IVF5 1701 aa-0.19□□□□□ -2.44
HMGB1P29-201ENST00000505659 MARF1Q9Y4F3 1742 aaKnown RBP-0.19□□□□□ -2.44
HMGB1P29-201ENST00000505659 PAPPA2Q9BXP8 1791 aa-0.19□□□□□ -2.44
HMGB1P29-201ENST00000505659 ARFGEF1Q9Y6D6 1849 aa-0.2□□□□□ -2.44
HMGB1P29-201ENST00000505659 LAMC1P11047 1609 aa-0.2□□□□□ -2.44
HMGB1P29-201ENST00000505659 COL4A6Q14031 1691 aa-0.2□□□□□ -2.44
HMGB1P29-201ENST00000505659 ANKRD36A6QL64 1941 aa-0.2□□□□□ -2.44
HMGB1P29-201ENST00000505659 NKTRP30414 1462 aaKnown RBP-0.2□□□□□ -2.44
HMGB1P29-201ENST00000505659 TRBV6-1A0A0K0K1D8 114 aa-0.2□□□□□ -2.44
HMGB1P29-201ENST00000505659 F8WEM9 126 aa-0.2□□□□□ -2.44
HMGB1P29-201ENST00000505659 H0YGG7 62 aa-0.2□□□□□ -2.44
HMGB1P29-201ENST00000505659 UQCR11O14957 56 aa-0.2□□□□□ -2.44
HMGB1P29-201ENST00000505659 MT-ATP8P03928 68 aa-0.2□□□□□ -2.44
HMGB1P29-201ENST00000505659 HMGA1P17096 107 aaKnown RBP-0.2□□□□□ -2.44
HMGB1P29-201ENST00000505659 RPS27P42677 84 aaKnown RBP-0.2□□□□□ -2.44
HMGB1P29-201ENST00000505659 TPPP2P59282 170 aa-0.2□□□□□ -2.44
HMGB1P29-201ENST00000505659 TMEM170BQ5T4T1 132 aa-0.2□□□□□ -2.44
HMGB1P29-201ENST00000505659 Q6AWC8 147 aa-0.2□□□□□ -2.44
HMGB1P29-201ENST00000505659 DEFB105AQ8NG35 78 aa-0.2□□□□□ -2.44
HMGB1P29-201ENST00000505659 SPRR4Q96PI1 79 aa-0.2□□□□□ -2.44
HMGB1P29-201ENST00000505659 NAA60Q9H7X0 242 aa-0.2□□□□□ -2.44
HMGB1P29-201ENST00000505659 ASXL1Q8IXJ9 1541 aa-0.2□□□□□ -2.44
HMGB1P29-201ENST00000505659 TET3O43151 1660 aa-0.21□□□□□ -2.44
HMGB1P29-201ENST00000505659 KDM5AP29375 1690 aaKnown RBP-0.21□□□□□ -2.44
HMGB1P29-201ENST00000505659 UNC13AQ9UPW8 1703 aa-0.21□□□□□ -2.44
HMGB1P29-201ENST00000505659 KDM3BQ7LBC6 1761 aa-0.21□□□□□ -2.44
HMGB1P29-201ENST00000505659 IGLV5-48A0A075B6I7 105 aa-0.21□□□□□ -2.44
HMGB1P29-201ENST00000505659 A0A096LNI7 61 aa-0.21□□□□□ -2.44
HMGB1P29-201ENST00000505659 FAM25AB3EWG3 89 aa-0.21□□□□□ -2.44
HMGB1P29-201ENST00000505659 FAM25CB3EWG5 89 aa-0.21□□□□□ -2.44
HMGB1P29-201ENST00000505659 FAM25GB3EWG6 89 aa-0.21□□□□□ -2.44
HMGB1P29-201ENST00000505659 M0QZ58 72 aa-0.21□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms