RNA–Protein interactions for RNA: ENST00000505315.1

HMGB1P22-201, Transcript of high mobility group box 1 pseudogene 22, humanhuman

BASIC

Gene HMGB1P22, Length 124 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P22-201ENST00000505315 TRBV7-4A0A0J9YYF1 115 aa1.35□□□□□ -2.19
HMGB1P22-201ENST00000505315 PTPN23Q9H3S7 1636 aa1.35□□□□□ -2.19
HMGB1P22-201ENST00000505315 NKTRP30414 1462 aaKnown RBP1.35□□□□□ -2.19
HMGB1P22-201ENST00000505315 LRP6O75581 1613 aa1.34□□□□□ -2.19
HMGB1P22-201ENST00000505315 FXYD6-FXYD2A0A087WZ82 144 aa1.34□□□□□ -2.19
HMGB1P22-201ENST00000505315 C5P01031 1676 aa1.34□□□□□ -2.19
HMGB1P22-201ENST00000505315 CNTRLQ7Z7A1 2325 aa1.34□□□□□ -2.2
HMGB1P22-201ENST00000505315 ZDBF2Q9HCK1 2354 aa1.34□□□□□ -2.2
HMGB1P22-201ENST00000505315 TMEM131LA2VDJ0 1609 aa1.33□□□□□ -2.2
HMGB1P22-201ENST00000505315 IQGAP3Q86VI3 1631 aa1.33□□□□□ -2.2
HMGB1P22-201ENST00000505315 ARL14EPLP0DKL9 152 aa1.33□□□□□ -2.2
HMGB1P22-201ENST00000505315 LCE3AQ5TA76 89 aa1.33□□□□□ -2.2
HMGB1P22-201ENST00000505315 DNAJC13O75165 2243 aa1.33□□□□□ -2.2
HMGB1P22-201ENST00000505315 SAMD9Q5K651 1589 aa1.33□□□□□ -2.2
HMGB1P22-201ENST00000505315 MAP2P11137 1827 aaKnown RBP1.33□□□□□ -2.2
HMGB1P22-201ENST00000505315 LINC00959A0A1B0GUT2 108 aa1.32□□□□□ -2.2
HMGB1P22-201ENST00000505315 RPL38P63173 70 aaKnown RBP1.32□□□□□ -2.2
HMGB1P22-201ENST00000505315 PIGYQ3MUY2 71 aa1.32□□□□□ -2.2
HMGB1P22-201ENST00000505315 KNTC1P50748 2209 aa1.32□□□□□ -2.2
HMGB1P22-201ENST00000505315 XRN1Q8IZH2 1706 aaKnown RBP1.32□□□□□ -2.2
HMGB1P22-201ENST00000505315 MYO5CQ9NQX4 1742 aa1.32□□□□□ -2.2
HMGB1P22-201ENST00000505315 CRYBG1Q9Y4K1 1723 aa1.32□□□□□ -2.2
HMGB1P22-201ENST00000505315 SCN11AQ9UI33 1791 aa1.31□□□□□ -2.2
HMGB1P22-201ENST00000505315 KIF20BQ96Q89 1820 aa1.31□□□□□ -2.2
HMGB1P22-201ENST00000505315 LRRC7Q96NW7 1537 aa1.31□□□□□ -2.2
HMGB1P22-201ENST00000505315 TARBP1Q13395 1621 aaKnown RBP1.31□□□□□ -2.2
HMGB1P22-201ENST00000505315 SPTY2D1-AS1A0A0U1RR47 76 aa1.31□□□□□ -2.2
HMGB1P22-201ENST00000505315 IFI6P09912 130 aa1.31□□□□□ -2.2
HMGB1P22-201ENST00000505315 COX8AP10176 69 aa1.31□□□□□ -2.2
HMGB1P22-201ENST00000505315 COX6A2Q02221 97 aa1.31□□□□□ -2.2
HMGB1P22-201ENST00000505315 NREPQ16612 68 aa1.31□□□□□ -2.2
HMGB1P22-201ENST00000505315 TP53AIP1Q9HCN2 124 aa1.31□□□□□ -2.2
HMGB1P22-201ENST00000505315 ZC3H13Q5T200 1668 aaKnown RBP1.31□□□□□ -2.2
HMGB1P22-201ENST00000505315 SORL1Q92673 2214 aa1.31□□□□□ -2.2
HMGB1P22-201ENST00000505315 HFM1A2PYH4 1435 aa1.31□□□□□ -2.2
HMGB1P22-201ENST00000505315 MAGI3Q5TCQ9 1506 aa1.3□□□□□ -2.2
HMGB1P22-201ENST00000505315 SHPRHQ149N8 1683 aa1.3□□□□□ -2.2
HMGB1P22-201ENST00000505315 PPRC1Q5VV67 1664 aaKnown RBP1.3□□□□□ -2.2
HMGB1P22-201ENST00000505315 A0A087WWC5 75 aa1.3□□□□□ -2.2
HMGB1P22-201ENST00000505315 COX7BP24311 80 aa1.3□□□□□ -2.2
HMGB1P22-201ENST00000505315 ATXN8Q156A1 80 aa1.3□□□□□ -2.2
HMGB1P22-201ENST00000505315 KRTAP21-3Q3LHN1 58 aa1.3□□□□□ -2.2
HMGB1P22-201ENST00000505315 KRTAP17-1Q9BYP8 105 aa1.3□□□□□ -2.2
HMGB1P22-201ENST00000505315 PRO0255Q9UI72 69 aa1.3□□□□□ -2.2
HMGB1P22-201ENST00000505315 SETBP1Q9Y6X0 1596 aa1.3□□□□□ -2.2
HMGB1P22-201ENST00000505315 KIAA0556O60303 1618 aa1.29□□□□□ -2.2
HMGB1P22-201ENST00000505315 RP1L1Q8IWN7 2480 aaPredicted RBP1.29□□□□□ -2.2
HMGB1P22-201ENST00000505315 PIK3C2BO00750 1634 aa1.29□□□□□ -2.2
HMGB1P22-201ENST00000505315 MROH1Q8NDA8 1641 aa1.29□□□□□ -2.2
HMGB1P22-201ENST00000505315 RGPD8O14715 1765 aaPredicted RBP1.29□□□□□ -2.2
HMGB1P22-201ENST00000505315 RGPD5Q99666 1765 aa1.29□□□□□ -2.2
HMGB1P22-201ENST00000505315 ASXL3Q9C0F0 2248 aa1.28□□□□□ -2.2
HMGB1P22-201ENST00000505315 CRIPTQ9P021 101 aa1.28□□□□□ -2.2
HMGB1P22-201ENST00000505315 EFCAB5A4FU69 1503 aa1.28□□□□□ -2.2
HMGB1P22-201ENST00000505315 NHSL1Q5SYE7 1610 aa1.28□□□□□ -2.2
HMGB1P22-201ENST00000505315 ALKQ9UM73 1620 aa1.28□□□□□ -2.2
HMGB1P22-201ENST00000505315 KRTAP5-11Q6L8G4 156 aa1.27□□□□□ -2.21
HMGB1P22-201ENST00000505315 USMG5Q96IX5 58 aa1.27□□□□□ -2.21
HMGB1P22-201ENST00000505315 CNFNQ9BYD5 112 aa1.27□□□□□ -2.21
HMGB1P22-201ENST00000505315 LTN1O94822 1766 aa1.26□□□□□ -2.21
HMGB1P22-201ENST00000505315 A0A0G2JMZ2 1700 aa1.26□□□□□ -2.21
HMGB1P22-201ENST00000505315 MADDQ8WXG6 1647 aa1.26□□□□□ -2.21
HMGB1P22-201ENST00000505315 A0A0D9SG42 100 aa1.26□□□□□ -2.21
HMGB1P22-201ENST00000505315 I3L3M4 83 aa1.26□□□□□ -2.21
HMGB1P22-201ENST00000505315 SFTA3P0C7M3 94 aa1.26□□□□□ -2.21
HMGB1P22-201ENST00000505315 SMIM5Q71RC9 77 aa1.26□□□□□ -2.21
HMGB1P22-201ENST00000505315 C10orf95Q9H7T3 257 aa1.26□□□□□ -2.21
HMGB1P22-201ENST00000505315 KDM3BQ7LBC6 1761 aa1.26□□□□□ -2.21
HMGB1P22-201ENST00000505315 ASXL1Q8IXJ9 1541 aa1.25□□□□□ -2.21
HMGB1P22-201ENST00000505315 Q8IZM0 81 aa1.25□□□□□ -2.21
HMGB1P22-201ENST00000505315 PAPPA2Q9BXP8 1791 aa1.25□□□□□ -2.21
HMGB1P22-201ENST00000505315 CADP27708 2225 aa1.25□□□□□ -2.21
HMGB1P22-201ENST00000505315 PKD1L3Q7Z443 1732 aa1.25□□□□□ -2.21
HMGB1P22-201ENST00000505315 CEP170BQ9Y4F5 1589 aaPredicted RBP1.25□□□□□ -2.21
HMGB1P22-201ENST00000505315 JMJD1CQ15652 2540 aa1.24□□□□□ -2.21
HMGB1P22-201ENST00000505315 KRTAP10-4P60372 401 aaPredicted RBP1.24□□□□□ -2.21
HMGB1P22-201ENST00000505315 FAM103A1Q9BTL3 118 aaKnown RBP1.24□□□□□ -2.21
HMGB1P22-201ENST00000505315 INO80Q9ULG1 1556 aaPredicted RBP1.24□□□□□ -2.21
HMGB1P22-201ENST00000505315 LMTK2Q8IWU2 1503 aa1.24□□□□□ -2.21
HMGB1P22-201ENST00000505315 FBN1P35555 2871 aaKnown RBP1.24□□□□□ -2.21
HMGB1P22-201ENST00000505315 C3orf79P0CE67 100 aa1.23□□□□□ -2.21
HMGB1P22-201ENST00000505315 TULP4Q9NRJ4 1543 aa1.23□□□□□ -2.21
HMGB1P22-201ENST00000505315 ROS1P08922 2347 aa1.23□□□□□ -2.21
HMGB1P22-201ENST00000505315 RGPD2P0DJD1 1756 aa1.23□□□□□ -2.21
HMGB1P22-201ENST00000505315 SLIT1O75093 1534 aa1.22□□□□□ -2.21
HMGB1P22-201ENST00000505315 I3L2K1 104 aa1.22□□□□□ -2.21
HMGB1P22-201ENST00000505315 NDUFA4O00483 81 aa1.22□□□□□ -2.21
HMGB1P22-201ENST00000505315 ANKRD50Q9ULJ7 1429 aa1.22□□□□□ -2.21
HMGB1P22-201ENST00000505315 COL6A6A6NMZ7 2263 aa1.22□□□□□ -2.21
HMGB1P22-201ENST00000505315 USP32Q8NFA0 1604 aa1.22□□□□□ -2.21
HMGB1P22-201ENST00000505315 KMT2BQ9UMN6 2715 aaPredicted RBP1.21□□□□□ -2.22
HMGB1P22-201ENST00000505315 ENHOQ6UWT2 76 aa1.21□□□□□ -2.22
HMGB1P22-201ENST00000505315 CDC42BPGQ6DT37 1551 aa1.21□□□□□ -2.22
HMGB1P22-201ENST00000505315 NAV3Q8IVL0 2385 aa1.2□□□□□ -2.22
HMGB1P22-201ENST00000505315 CPSF4LA6NMK7 179 aaKnown RBP1.2□□□□□ -2.22
HMGB1P22-201ENST00000505315 HMGA1P17096 107 aaKnown RBP1.2□□□□□ -2.22
HMGB1P22-201ENST00000505315 FXYD6Q9H0Q3 95 aa1.2□□□□□ -2.22
HMGB1P22-201ENST00000505315 CACNA1CQ13936 2221 aa1.2□□□□□ -2.22
HMGB1P22-201ENST00000505315 LRRC37AA6NMS7 1700 aa1.2□□□□□ -2.22
HMGB1P22-201ENST00000505315 RGPD1P0DJD0 1748 aa1.2□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms