RNA–Protein interactions for RNA: ENST00000505020.1

CDH9-202, Transcript of cadherin 9, humanhuman

TSL 2

Gene CDH9, Length 1,836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-202ENST00000505020 CEP192Q8TEP8 1941 aa4.11□□□□□ -1.75
CDH9-202ENST00000505020 J3QRE1 110 aa4.11□□□□□ -1.75
CDH9-202ENST00000505020 SPINK7P58062 85 aa4.11□□□□□ -1.75
CDH9-202ENST00000505020 HCP5Q6MZN7 132 aa4.11□□□□□ -1.75
CDH9-202ENST00000505020 NCOA6Q14686 2063 aaPredicted RBP4.1□□□□□ -1.75
CDH9-202ENST00000505020 PIEZO1Q92508 2521 aa4.1□□□□□ -1.75
CDH9-202ENST00000505020 NDUFB1O75438 58 aa4.1□□□□□ -1.75
CDH9-202ENST00000505020 SPRR4Q96PI1 79 aa4.1□□□□□ -1.75
CDH9-202ENST00000505020 INTS1Q8N201 2190 aaKnown RBP4.1□□□□□ -1.75
CDH9-202ENST00000505020 MKI67P46013 3256 aaKnown RBP4.1□□□□□ -1.75
CDH9-202ENST00000505020 A0A087WTM6 91 aa4.09□□□□□ -1.75
CDH9-202ENST00000505020 TRAV21A0A0B4J279 112 aa4.09□□□□□ -1.75
CDH9-202ENST00000505020 RNASE3P12724 160 aaKnown RBP4.09□□□□□ -1.75
CDH9-202ENST00000505020 SPACA4Q8TDM5 124 aa4.09□□□□□ -1.75
CDH9-202ENST00000505020 TMEM263Q8WUH6 116 aaKnown RBP4.09□□□□□ -1.75
CDH9-202ENST00000505020 LINC00208Q96KT6 92 aa4.09□□□□□ -1.75
CDH9-202ENST00000505020 ZFHX2Q9C0A1 2572 aaPredicted RBP4.09□□□□□ -1.75
CDH9-202ENST00000505020 UNC80Q8N2C7 3258 aa4.09□□□□□ -1.76
CDH9-202ENST00000505020 NBDYA0A0U1RRE5 68 aa4.09□□□□□ -1.76
CDH9-202ENST00000505020 H0Y9P7 68 aa4.09□□□□□ -1.76
CDH9-202ENST00000505020 DEFB134Q4QY38 66 aa4.09□□□□□ -1.76
CDH9-202ENST00000505020 TXNDC17Q9BRA2 123 aa4.09□□□□□ -1.76
CDH9-202ENST00000505020 ENHOQ6UWT2 76 aa4.08□□□□□ -1.76
CDH9-202ENST00000505020 WFDC6Q9BQY6 131 aa4.08□□□□□ -1.76
CDH9-202ENST00000505020 KLK9Q9UKQ9 250 aa4.08□□□□□ -1.76
CDH9-202ENST00000505020 RANBP2P49792 3224 aaKnown RBP4.08□□□□□ -1.76
CDH9-202ENST00000505020 SPTBN5Q9NRC6 3674 aaKnown RBP4.08□□□□□ -1.76
CDH9-202ENST00000505020 IGKV2-40A0A087WW87 121 aaPredicted RBP4.07□□□□□ -1.76
CDH9-202ENST00000505020 IGKV2D-40P01614 121 aaPredicted RBP4.07□□□□□ -1.76
CDH9-202ENST00000505020 COL5A1P20908 1838 aaPredicted RBP4.07□□□□□ -1.76
CDH9-202ENST00000505020 SDK1Q7Z5N4 2213 aa4.06□□□□□ -1.76
CDH9-202ENST00000505020 TRAV40A0A0B4J280 105 aa4.06□□□□□ -1.76
CDH9-202ENST00000505020 IGLV3-19P01714 112 aa4.06□□□□□ -1.76
CDH9-202ENST00000505020 RPL37AP61513 92 aaKnown RBP4.06□□□□□ -1.76
CDH9-202ENST00000505020 DOCK10Q96BY6 2186 aa4.06□□□□□ -1.76
CDH9-202ENST00000505020 SSC5DA1L4H1 1573 aa4.06□□□□□ -1.76
CDH9-202ENST00000505020 FXYD3Q14802 87 aa4.05□□□□□ -1.76
CDH9-202ENST00000505020 SPATA8Q6RVD6 105 aa4.05□□□□□ -1.76
CDH9-202ENST00000505020 WFDC9Q8NEX5 89 aa4.05□□□□□ -1.76
CDH9-202ENST00000505020 HTTP42858 3142 aa4.05□□□□□ -1.76
CDH9-202ENST00000505020 LCE6AA0A183 80 aa4.05□□□□□ -1.76
CDH9-202ENST00000505020 A0A1W2PNN7 141 aa4.05□□□□□ -1.76
CDH9-202ENST00000505020 IL9P15248 144 aa4.05□□□□□ -1.76
CDH9-202ENST00000505020 C10orf113Q5VZT2 155 aa4.05□□□□□ -1.76
CDH9-202ENST00000505020 SMIM27A0A1W2PRY6 76 aa4.04□□□□□ -1.76
CDH9-202ENST00000505020 IGKV2-29A2NJV5 120 aaPredicted RBP4.04□□□□□ -1.76
CDH9-202ENST00000505020 LINC00322Q6ZN03 302 aaPredicted RBP4.04□□□□□ -1.76
CDH9-202ENST00000505020 TRGV4A0A0C4DH28 118 aa4.03□□□□□ -1.76
CDH9-202ENST00000505020 BRCA2P51587 3418 aa4.03□□□□□ -1.76
CDH9-202ENST00000505020 LINC00304Q8N9R0 145 aa4.02□□□□□ -1.77
CDH9-202ENST00000505020 ZCCHC13Q8WW36 166 aaKnown RBP4.02□□□□□ -1.77
CDH9-202ENST00000505020 UBL5Q9BZL1 73 aa4.02□□□□□ -1.77
CDH9-202ENST00000505020 DUOX1Q9NRD9 1551 aa4.02□□□□□ -1.77
CDH9-202ENST00000505020 NCOR1O75376 2440 aa4.02□□□□□ -1.77
CDH9-202ENST00000505020 MUC6Q6W4X9 2439 aa4.02□□□□□ -1.77
CDH9-202ENST00000505020 DDX60LQ5H9U9 1706 aaKnown RBP4.02□□□□□ -1.77
CDH9-202ENST00000505020 TRBV6-1A0A0K0K1D8 114 aa4.02□□□□□ -1.77
CDH9-202ENST00000505020 OBSCN-AS1Q96MR7 158 aa4.02□□□□□ -1.77
CDH9-202ENST00000505020 LAMA3Q16787 3333 aa4.02□□□□□ -1.77
CDH9-202ENST00000505020 C5orf56Q8N8D9 126 aa4.01□□□□□ -1.77
CDH9-202ENST00000505020 VCANP13611 3396 aa4.01□□□□□ -1.77
CDH9-202ENST00000505020 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4□□□□□ -1.77
CDH9-202ENST00000505020 C10orf55Q5SWW7 151 aa4□□□□□ -1.77
CDH9-202ENST00000505020 TRAV1-2A0A0B4J238 106 aa4□□□□□ -1.77
CDH9-202ENST00000505020 Q96NJ1 140 aa4□□□□□ -1.77
CDH9-202ENST00000505020 DDX60Q8IY21 1712 aaKnown RBP3.99□□□□□ -1.77
CDH9-202ENST00000505020 SNRPGP62308 76 aaKnown RBP3.99□□□□□ -1.77
CDH9-202ENST00000505020 SERF2P84101 59 aa3.99□□□□□ -1.77
CDH9-202ENST00000505020 LINC00472Q9H8W2 130 aa3.99□□□□□ -1.77
CDH9-202ENST00000505020 BDP1A6H8Y1 2624 aa3.98□□□□□ -1.77
CDH9-202ENST00000505020 PLNP26678 52 aa3.98□□□□□ -1.77
CDH9-202ENST00000505020 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.98□□□□□ -1.77
CDH9-202ENST00000505020 LRRC37AA6NMS7 1700 aa3.98□□□□□ -1.77
CDH9-202ENST00000505020 TRGV1A0A0A0MS02 117 aa3.98□□□□□ -1.77
CDH9-202ENST00000505020 IGKV4-1P06312 121 aa3.98□□□□□ -1.77
CDH9-202ENST00000505020 GAFA1Q96PS6 74 aa3.98□□□□□ -1.77
CDH9-202ENST00000505020 CENPFP49454 3210 aa3.97□□□□□ -1.77
CDH9-202ENST00000505020 HMGA2P52926 109 aa3.97□□□□□ -1.77
CDH9-202ENST00000505020 FXYD4P59646 89 aa3.96□□□□□ -1.78
CDH9-202ENST00000505020 DEFB112Q30KQ8 113 aa3.96□□□□□ -1.78
CDH9-202ENST00000505020 TMEM14CQ9P0S9 112 aa3.96□□□□□ -1.78
CDH9-202ENST00000505020 BRWD1Q9NSI6 2320 aa3.96□□□□□ -1.78
CDH9-202ENST00000505020 SEC16AO15027 2179 aa3.96□□□□□ -1.78
CDH9-202ENST00000505020 IGKV3-15P01624 115 aa3.95□□□□□ -1.78
CDH9-202ENST00000505020 COX17Q14061 63 aa3.95□□□□□ -1.78
CDH9-202ENST00000505020 PRUNE2Q8WUY3 3088 aa3.95□□□□□ -1.78
CDH9-202ENST00000505020 MUC3AQ02505 3323 aa3.95□□□□□ -1.78
CDH9-202ENST00000505020 LAMA2P24043 3122 aaKnown RBP3.95□□□□□ -1.78
CDH9-202ENST00000505020 PKD1L2Q7Z442 2459 aa3.95□□□□□ -1.78
CDH9-202ENST00000505020 CACNA1GO43497 2377 aa3.94□□□□□ -1.78
CDH9-202ENST00000505020 TRGV2A0A075B6R0 118 aa3.94□□□□□ -1.78
CDH9-202ENST00000505020 M0R1W7 72 aa3.93□□□□□ -1.78
CDH9-202ENST00000505020 ZDBF2Q9HCK1 2354 aa3.93□□□□□ -1.78
CDH9-202ENST00000505020 LINC00959A0A1B0GUT2 108 aa3.93□□□□□ -1.78
CDH9-202ENST00000505020 DSCR10P59022 87 aa3.93□□□□□ -1.78
CDH9-202ENST00000505020 KRTAP11-1Q8IUC1 163 aa3.93□□□□□ -1.78
CDH9-202ENST00000505020 CACNA1BQ00975 2339 aa3.92□□□□□ -1.78
CDH9-202ENST00000505020 EYSQ5T1H1 3165 aa3.92□□□□□ -1.78
CDH9-202ENST00000505020 LOC110117498A0A087WWA1 95 aa3.92□□□□□ -1.78
CDH9-202ENST00000505020 ZNF625Q96I27 306 aaPredicted RBP3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms