RNA–Protein interactions for RNA: ENST00000504951.6

GYPB-204, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-204ENST00000504951 A0A087X002 238 aa3.46□□□□□ -1.86
GYPB-204ENST00000504951 SMIM27A0A1W2PRY6 76 aa3.46□□□□□ -1.86
GYPB-204ENST00000504951 LINC00862A6NCI5 91 aa3.46□□□□□ -1.86
GYPB-204ENST00000504951 D6R8Y8 96 aa3.46□□□□□ -1.86
GYPB-204ENST00000504951 CKS2P33552 79 aa3.46□□□□□ -1.86
GYPB-204ENST00000504951 UBE2BP63146 152 aa3.46□□□□□ -1.86
GYPB-204ENST00000504951 HBBP68871 147 aa3.46□□□□□ -1.86
GYPB-204ENST00000504951 SMAGPQ0VAQ4 97 aa3.46□□□□□ -1.86
GYPB-204ENST00000504951 FAM229BQ4G0N7 80 aa3.46□□□□□ -1.86
GYPB-204ENST00000504951 MRPL54Q6P161 138 aaKnown RBP3.46□□□□□ -1.86
GYPB-204ENST00000504951 FP248Q71RG6 208 aaPredicted RBP3.46□□□□□ -1.86
GYPB-204ENST00000504951 TMEM18Q96B42 140 aa3.46□□□□□ -1.86
GYPB-204ENST00000504951 IGLV4-3A0A075B6K6 122 aa3.45□□□□□ -1.86
GYPB-204ENST00000504951 A0A1B0GXF2 115 aa3.45□□□□□ -1.86
GYPB-204ENST00000504951 NDUFC2-KCTD14E9PQ53 114 aa3.45□□□□□ -1.86
GYPB-204ENST00000504951 ADIRFQ15847 76 aa3.45□□□□□ -1.86
GYPB-204ENST00000504951 LINC00173Q6ZV60 143 aa3.45□□□□□ -1.86
GYPB-204ENST00000504951 LINC00469Q8N7U9 141 aa3.45□□□□□ -1.86
GYPB-204ENST00000504951 PPDPFQ9H3Y8 114 aa3.45□□□□□ -1.86
GYPB-204ENST00000504951 TMA7Q9Y2S6 64 aaKnown RBP3.45□□□□□ -1.86
GYPB-204ENST00000504951 hCG_2014768A0A024R1R8 64 aa3.44□□□□□ -1.86
GYPB-204ENST00000504951 TGIF2-C20orf24A0A0A6YYL0 155 aa3.44□□□□□ -1.86
GYPB-204ENST00000504951 TRBV30A0A0K0K1B3 111 aa3.44□□□□□ -1.86
GYPB-204ENST00000504951 SEC61BP60468 96 aaKnown RBP3.44□□□□□ -1.86
GYPB-204ENST00000504951 KRTAP4-1Q9BYQ7 146 aa3.44□□□□□ -1.86
GYPB-204ENST00000504951 XAGE1AQ9HD64 81 aa3.44□□□□□ -1.86
GYPB-204ENST00000504951 ANAPC11Q9NYG5 84 aa3.44□□□□□ -1.86
GYPB-204ENST00000504951 NAT8Q9UHE5 227 aa3.44□□□□□ -1.86
GYPB-204ENST00000504951 C22orf24Q9Y442 160 aa3.44□□□□□ -1.86
GYPB-204ENST00000504951 IFI27P40305 119 aaPredicted RBP3.43□□□□□ -1.86
GYPB-204ENST00000504951 RPL28P46779 137 aaKnown RBP3.43□□□□□ -1.86
GYPB-204ENST00000504951 KRTAP19-2Q3LHN2 52 aa3.43□□□□□ -1.86
GYPB-204ENST00000504951 KRTAP13-2Q52LG2 175 aa3.43□□□□□ -1.86
GYPB-204ENST00000504951 AKAP14Q86UN6 197 aa3.43□□□□□ -1.86
GYPB-204ENST00000504951 LINC00304Q8N9R0 145 aa3.43□□□□□ -1.86
GYPB-204ENST00000504951 TMEM141Q96I45 108 aa3.43□□□□□ -1.86
GYPB-204ENST00000504951 RETNLBQ9BQ08 111 aa3.43□□□□□ -1.86
GYPB-204ENST00000504951 CTDSP1Q9GZU7 261 aa3.43□□□□□ -1.86
GYPB-204ENST00000504951 PYGO1Q9Y3Y4 419 aa3.43□□□□□ -1.86
GYPB-204ENST00000504951 LOC389332A0A1B0GUA5 103 aa3.42□□□□□ -1.86
GYPB-204ENST00000504951 A0A1B0GW15 77 aa3.42□□□□□ -1.86
GYPB-204ENST00000504951 PPBPP02775 128 aa3.42□□□□□ -1.86
GYPB-204ENST00000504951 KRTAP13-3Q3SY46 172 aa3.42□□□□□ -1.86
GYPB-204ENST00000504951 LBHQ53QV2 105 aaPredicted RBP3.42□□□□□ -1.86
GYPB-204ENST00000504951 SPAG11AQ6PDA7 123 aa3.42□□□□□ -1.86
GYPB-204ENST00000504951 TMEM136Q6ZRR5 245 aa3.42□□□□□ -1.86
GYPB-204ENST00000504951 ORMDL3Q8N138 153 aa3.42□□□□□ -1.86
GYPB-204ENST00000504951 PACRGQ96M98 296 aaPredicted RBP3.42□□□□□ -1.86
GYPB-204ENST00000504951 PRELID3AQ96N28 172 aa3.42□□□□□ -1.86
GYPB-204ENST00000504951 AMELXQ99217 191 aa3.42□□□□□ -1.86
GYPB-204ENST00000504951 TOMM7Q9P0U1 55 aa3.42□□□□□ -1.86
GYPB-204ENST00000504951 TP73-AS1Q9UF72 201 aa3.42□□□□□ -1.86
GYPB-204ENST00000504951 IGIPA6NJ69 53 aa3.41□□□□□ -1.86
GYPB-204ENST00000504951 RPL37AP8A6NKH3 93 aa3.41□□□□□ -1.86
GYPB-204ENST00000504951 PRSS47A8MTI9 375 aa3.41□□□□□ -1.86
GYPB-204ENST00000504951 F8W036 122 aa3.41□□□□□ -1.86
GYPB-204ENST00000504951 BCE1O60756 84 aa3.41□□□□□ -1.86
GYPB-204ENST00000504951 RAB5AP20339 215 aa3.41□□□□□ -1.86
GYPB-204ENST00000504951 MT1HP80294 61 aa3.41□□□□□ -1.86
GYPB-204ENST00000504951 C2orf66Q6UXQ4 117 aa3.41□□□□□ -1.86
GYPB-204ENST00000504951 TEX43Q6ZNM6 134 aa3.41□□□□□ -1.86
GYPB-204ENST00000504951 LINC01561Q8N1V8 128 aa3.41□□□□□ -1.86
GYPB-204ENST00000504951 LINC00337Q8N6G1 96 aa3.41□□□□□ -1.86
GYPB-204ENST00000504951 CDKN2A-AS1Q9UH64 79 aa3.41□□□□□ -1.86
GYPB-204ENST00000504951 GAGE10A6NGK3 116 aa3.4□□□□□ -1.87
GYPB-204ENST00000504951 S100A8P05109 93 aa3.4□□□□□ -1.87
GYPB-204ENST00000504951 KRTAP10-6P60371 365 aaPredicted RBP3.4□□□□□ -1.87
GYPB-204ENST00000504951 CKS1BP61024 79 aa3.4□□□□□ -1.87
GYPB-204ENST00000504951 C6orf226Q5I0X4 101 aa3.4□□□□□ -1.87
GYPB-204ENST00000504951 Q6ZN92 141 aa3.4□□□□□ -1.87
GYPB-204ENST00000504951 FAM19A3Q7Z5A8 133 aa3.4□□□□□ -1.87
GYPB-204ENST00000504951 MRPL55Q7Z7F7 128 aaKnown RBP3.4□□□□□ -1.87
GYPB-204ENST00000504951 KRTAP13-1Q8IUC0 172 aa3.4□□□□□ -1.87
GYPB-204ENST00000504951 Q8IZM0 81 aa3.4□□□□□ -1.87
GYPB-204ENST00000504951 LINC00167Q96N53 147 aa3.4□□□□□ -1.87
GYPB-204ENST00000504951 ALKBH7Q9BT30 221 aaPredicted RBP3.4□□□□□ -1.87
GYPB-204ENST00000504951 VCX2Q9H322 139 aa3.4□□□□□ -1.87
GYPB-204ENST00000504951 A0A1B0GVG6 124 aa3.39□□□□□ -1.87
GYPB-204ENST00000504951 F8VRH5 84 aa3.39□□□□□ -1.87
GYPB-204ENST00000504951 SCO1O75880 301 aa3.39□□□□□ -1.87
GYPB-204ENST00000504951 PRSS2P07478 247 aa3.39□□□□□ -1.87
GYPB-204ENST00000504951 Q8N8P6 123 aa3.39□□□□□ -1.87
GYPB-204ENST00000504951 C2orf88Q9BSF0 95 aa3.39□□□□□ -1.87
GYPB-204ENST00000504951 MAP1LC3AQ9H492 121 aa3.39□□□□□ -1.87
GYPB-204ENST00000504951 CYSLTR1Q9Y271 337 aa3.39□□□□□ -1.87
GYPB-204ENST00000504951 PEA15Q15121 130 aa3.38□□□□□ -1.87
GYPB-204ENST00000504951 ATP5L2Q7Z4Y8 100 aa3.38□□□□□ -1.87
GYPB-204ENST00000504951 IGKV2D-26A0A0A0MRZ7 120 aa3.37□□□□□ -1.87
GYPB-204ENST00000504951 SMIM1B2RUZ4 78 aa3.37□□□□□ -1.87
GYPB-204ENST00000504951 ADCYAP1P18509 176 aa3.37□□□□□ -1.87
GYPB-204ENST00000504951 RAB5BP61020 215 aa3.37□□□□□ -1.87
GYPB-204ENST00000504951 HERVK_113P63121 156 aa3.37□□□□□ -1.87
GYPB-204ENST00000504951 PRLHP81277 87 aa3.37□□□□□ -1.87
GYPB-204ENST00000504951 GEMIN7Q9H840 131 aaKnown RBP3.37□□□□□ -1.87
GYPB-204ENST00000504951 LAMTOR2Q9Y2Q5 125 aa3.37□□□□□ -1.87
GYPB-204ENST00000504951 IGLV5-37A0A075B6J1 123 aa3.36□□□□□ -1.87
GYPB-204ENST00000504951 IGKV2-28A0A075B6P5 120 aa3.36□□□□□ -1.87
GYPB-204ENST00000504951 IGKV2D-28P01615 120 aa3.36□□□□□ -1.87
GYPB-204ENST00000504951 NPSP0C0P6 89 aa3.36□□□□□ -1.87
GYPB-204ENST00000504951 PNRC1Q12796 327 aaPredicted RBP3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms