RNA–Protein interactions for RNA: ENST00000504554.1

RFC1-207, Transcript of replication factor C subunit 1, humanhuman

TSL 4

Gene RFC1, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-207ENST00000504554 RPS10P5Q9NQ39 176 aa5□□□□□ -1.61
RFC1-207ENST00000504554 CYSLTR1Q9Y271 337 aa5□□□□□ -1.61
RFC1-207ENST00000504554 A0A087WZ39 114 aa4.99□□□□□ -1.61
RFC1-207ENST00000504554 LINC01546A6NGU7 62 aa4.99□□□□□ -1.61
RFC1-207ENST00000504554 GAGE2BQ13066 116 aa4.99□□□□□ -1.61
RFC1-207ENST00000504554 RHEBQ15382 184 aa4.99□□□□□ -1.61
RFC1-207ENST00000504554 UNQ6190/PRO20217Q6UXQ8 127 aa4.99□□□□□ -1.61
RFC1-207ENST00000504554 OR10D4PQ8NGN7 298 aa4.99□□□□□ -1.61
RFC1-207ENST00000504554 TOMM6Q96B49 74 aa4.99□□□□□ -1.61
RFC1-207ENST00000504554 NXT2Q9NPJ8 142 aaKnown RBP4.99□□□□□ -1.61
RFC1-207ENST00000504554 DMBT1Q9UGM3 2413 aaPredicted RBP4.99□□□□□ -1.61
RFC1-207ENST00000504554 UBR4Q5T4S7 5183 aa4.98□□□□□ -1.61
RFC1-207ENST00000504554 LOC107984640A0A0U1RRK4 108 aa4.98□□□□□ -1.61
RFC1-207ENST00000504554 APOMO95445 188 aa4.98□□□□□ -1.61
RFC1-207ENST00000504554 S100PP25815 95 aa4.98□□□□□ -1.61
RFC1-207ENST00000504554 FABP9Q0Z7S8 132 aa4.98□□□□□ -1.61
RFC1-207ENST00000504554 KRTAP15-1Q3LI76 137 aa4.98□□□□□ -1.61
RFC1-207ENST00000504554 TEX43Q6ZNM6 134 aa4.98□□□□□ -1.61
RFC1-207ENST00000504554 FAM19A3Q7Z5A8 133 aa4.98□□□□□ -1.61
RFC1-207ENST00000504554 URB1-AS1Q96HZ7 61 aa4.98□□□□□ -1.61
RFC1-207ENST00000504554 YPEL4Q96NS1 127 aa4.98□□□□□ -1.61
RFC1-207ENST00000504554 C6orf48Q9UBA6 75 aa4.98□□□□□ -1.61
RFC1-207ENST00000504554 K7EMI3 77 aa4.97□□□□□ -1.61
RFC1-207ENST00000504554 APOC3P02656 99 aa4.97□□□□□ -1.61
RFC1-207ENST00000504554 PRR3P79522 188 aaKnown RBP4.97□□□□□ -1.61
RFC1-207ENST00000504554 C2orf82Q6UX34 121 aa4.97□□□□□ -1.61
RFC1-207ENST00000504554 Q6ZRP5 223 aa4.97□□□□□ -1.61
RFC1-207ENST00000504554 KRTAP7-1Q8IUC3 87 aa4.97□□□□□ -1.61
RFC1-207ENST00000504554 TIMM17AQ99595 171 aa4.97□□□□□ -1.61
RFC1-207ENST00000504554 VCX2Q9H322 139 aa4.97□□□□□ -1.61
RFC1-207ENST00000504554 MRPL35Q9NZE8 188 aaKnown RBP4.97□□□□□ -1.61
RFC1-207ENST00000504554 A0A096LNJ9 63 aa4.96□□□□□ -1.62
RFC1-207ENST00000504554 FAM168BA1KXE4 195 aa4.96□□□□□ -1.62
RFC1-207ENST00000504554 MT1HL1P0DM35 61 aa4.96□□□□□ -1.62
RFC1-207ENST00000504554 RPL18AQ02543 176 aaKnown RBP4.96□□□□□ -1.62
RFC1-207ENST00000504554 C9orf116Q5BN46 136 aaPredicted RBP4.96□□□□□ -1.62
RFC1-207ENST00000504554 KRTAP11-1Q8IUC1 163 aa4.96□□□□□ -1.62
RFC1-207ENST00000504554 LINC00474Q9P2X8 69 aa4.96□□□□□ -1.62
RFC1-207ENST00000504554 NDUFA1O15239 70 aa4.95□□□□□ -1.62
RFC1-207ENST00000504554 OXTP01178 125 aa4.95□□□□□ -1.62
RFC1-207ENST00000504554 Q6ZN92 141 aa4.95□□□□□ -1.62
RFC1-207ENST00000504554 PHF5AQ7RTV0 110 aaKnown RBP4.95□□□□□ -1.62
RFC1-207ENST00000504554 ERASQ7Z444 233 aa4.95□□□□□ -1.62
RFC1-207ENST00000504554 LINC01561Q8N1V8 128 aa4.95□□□□□ -1.62
RFC1-207ENST00000504554 C7orf33Q8WU49 177 aa4.95□□□□□ -1.62
RFC1-207ENST00000504554 SCGB3A1Q96QR1 104 aa4.95□□□□□ -1.62
RFC1-207ENST00000504554 C2orf88Q9BSF0 95 aa4.95□□□□□ -1.62
RFC1-207ENST00000504554 CDKN2A-AS1Q9UH64 79 aa4.95□□□□□ -1.62
RFC1-207ENST00000504554 F8WDY8 70 aa4.94□□□□□ -1.62
RFC1-207ENST00000504554 MT-ND6P03923 174 aa4.94□□□□□ -1.62
RFC1-207ENST00000504554 TLX1NBP0CAT3 122 aa4.94□□□□□ -1.62
RFC1-207ENST00000504554 COX19Q49B96 90 aa4.94□□□□□ -1.62
RFC1-207ENST00000504554 C18orf32Q8TCD1 76 aa4.94□□□□□ -1.62
RFC1-207ENST00000504554 TRAPPC1Q9Y5R8 145 aa4.94□□□□□ -1.62
RFC1-207ENST00000504554 SNAPINO95295 136 aa4.93□□□□□ -1.62
RFC1-207ENST00000504554 SRSF9Q13242 221 aaKnown RBP eCLIP4.93□□□□□ -1.62
RFC1-207ENST00000504554 PMCHL1Q16048 86 aa4.93□□□□□ -1.62
RFC1-207ENST00000504554 GAGE2EQ4V326 116 aa4.93□□□□□ -1.62
RFC1-207ENST00000504554 C9orf129Q5T035 196 aaKnown RBP4.93□□□□□ -1.62
RFC1-207ENST00000504554 FA2HQ7L5A8 372 aa4.93□□□□□ -1.62
RFC1-207ENST00000504554 SVBPQ8N300 66 aa4.93□□□□□ -1.62
RFC1-207ENST00000504554 CST9LQ9H4G1 147 aa4.93□□□□□ -1.62
RFC1-207ENST00000504554 TOMM7Q9P0U1 55 aa4.93□□□□□ -1.62
RFC1-207ENST00000504554 GAGE2DQ9UEU5 116 aa4.93□□□□□ -1.62
RFC1-207ENST00000504554 PKIGQ9Y2B9 76 aa4.93□□□□□ -1.62
RFC1-207ENST00000504554 IGLV5-45A0A087WSX0 123 aa4.92□□□□□ -1.62
RFC1-207ENST00000504554 TRBV30A0A0K0K1B3 111 aa4.92□□□□□ -1.62
RFC1-207ENST00000504554 SMIM1B2RUZ4 78 aa4.92□□□□□ -1.62
RFC1-207ENST00000504554 SNRPEP62304 92 aaKnown RBP4.92□□□□□ -1.62
RFC1-207ENST00000504554 HERVK_113P63121 156 aa4.92□□□□□ -1.62
RFC1-207ENST00000504554 CBLN2Q8IUK8 224 aa4.92□□□□□ -1.62
RFC1-207ENST00000504554 SLC7A5P1Q8MH63 180 aa4.92□□□□□ -1.62
RFC1-207ENST00000504554 PSORS1C2Q9UIG4 136 aa4.92□□□□□ -1.62
RFC1-207ENST00000504554 TINCRA0A1B0GVN0 87 aa4.91□□□□□ -1.62
RFC1-207ENST00000504554 SPINK8P0C7L1 97 aa4.91□□□□□ -1.62
RFC1-207ENST00000504554 LINC00614P0C842 121 aa4.91□□□□□ -1.62
RFC1-207ENST00000504554 G0S2P27469 103 aa4.91□□□□□ -1.62
RFC1-207ENST00000504554 UBE2V1Q13404 147 aa4.91□□□□□ -1.62
RFC1-207ENST00000504554 PDZD11Q5EBL8 140 aa4.91□□□□□ -1.62
RFC1-207ENST00000504554 PAPPA-AS1Q5QFB9 102 aa4.91□□□□□ -1.62
RFC1-207ENST00000504554 FAM19A5Q7Z5A7 132 aaPredicted RBP4.91□□□□□ -1.62
RFC1-207ENST00000504554 Q8IZM0 81 aa4.91□□□□□ -1.62
RFC1-207ENST00000504554 LINC00469Q8N7U9 141 aa4.91□□□□□ -1.62
RFC1-207ENST00000504554 GEMIN7Q9H840 131 aaKnown RBP4.91□□□□□ -1.62
RFC1-207ENST00000504554 SMCO4Q9NRQ5 59 aa4.91□□□□□ -1.62
RFC1-207ENST00000504554 NDUFC2-KCTD14E9PQ53 114 aa4.9□□□□□ -1.63
RFC1-207ENST00000504554 PMVKQ15126 192 aa4.9□□□□□ -1.63
RFC1-207ENST00000504554 NDUFA5Q16718 116 aa4.9□□□□□ -1.63
RFC1-207ENST00000504554 C6orf226Q5I0X4 101 aa4.9□□□□□ -1.63
RFC1-207ENST00000504554 PACRGQ96M98 296 aaPredicted RBP4.9□□□□□ -1.63
RFC1-207ENST00000504554 LRP2P98164 4655 aa4.9□□□□□ -1.63
RFC1-207ENST00000504554 PRSS2P07478 247 aa4.89□□□□□ -1.63
RFC1-207ENST00000504554 IGLC3P0DOY3 106 aa4.89□□□□□ -1.63
RFC1-207ENST00000504554 SEC11AP67812 179 aa4.89□□□□□ -1.63
RFC1-207ENST00000504554 LBHQ53QV2 105 aaPredicted RBP4.89□□□□□ -1.63
RFC1-207ENST00000504554 COX7B2Q8TF08 81 aa4.89□□□□□ -1.63
RFC1-207ENST00000504554 C5orf52A6NGY3 159 aa4.88□□□□□ -1.63
RFC1-207ENST00000504554 LINC01549A6NIU2 74 aa4.88□□□□□ -1.63
RFC1-207ENST00000504554 F8VRH5 84 aa4.88□□□□□ -1.63
RFC1-207ENST00000504554 HBDP02042 147 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms