RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 NBPF19A0A087WUL8 3843 aa5.39□□□□□ -1.55
NEDD9-208ENST00000504387 IGLV10-54A0A075B6I4 117 aa5.39□□□□□ -1.55
NEDD9-208ENST00000504387 F5H768 121 aa5.39□□□□□ -1.55
NEDD9-208ENST00000504387 INSP01308 110 aa5.39□□□□□ -1.55
NEDD9-208ENST00000504387 DEFB130BP0DP73 79 aa5.39□□□□□ -1.55
NEDD9-208ENST00000504387 DEFB130AP0DP74 79 aa5.39□□□□□ -1.55
NEDD9-208ENST00000504387 WFDC11Q8NEX6 87 aa5.39□□□□□ -1.55
NEDD9-208ENST00000504387 TMEM243Q9BU79 118 aa5.39□□□□□ -1.55
NEDD9-208ENST00000504387 HECTD1Q9ULT8 2610 aa5.39□□□□□ -1.55
NEDD9-208ENST00000504387 C9orf116Q5BN46 136 aaPredicted RBP5.38□□□□□ -1.55
NEDD9-208ENST00000504387 C11orf72Q8NBR9 251 aa5.38□□□□□ -1.55
NEDD9-208ENST00000504387 ESM1Q9NQ30 184 aa5.38□□□□□ -1.55
NEDD9-208ENST00000504387 MAP6D1Q9H9H5 199 aa5.38□□□□□ -1.55
NEDD9-208ENST00000504387 PKIGQ9Y2B9 76 aa5.38□□□□□ -1.55
NEDD9-208ENST00000504387 PRORYQ9H606 182 aa5.38□□□□□ -1.55
NEDD9-208ENST00000504387 TRGV4A0A0C4DH28 118 aa5.37□□□□□ -1.55
NEDD9-208ENST00000504387 PF4P02776 101 aa5.37□□□□□ -1.55
NEDD9-208ENST00000504387 COPS9Q8WXC6 57 aa5.37□□□□□ -1.55
NEDD9-208ENST00000504387 ZNF702PQ9H963 129 aa5.37□□□□□ -1.55
NEDD9-208ENST00000504387 F8P00451 2351 aa5.37□□□□□ -1.55
NEDD9-208ENST00000504387 CR1P17927 2039 aa5.37□□□□□ -1.55
NEDD9-208ENST00000504387 USP24Q9UPU5 2620 aa5.37□□□□□ -1.55
NEDD9-208ENST00000504387 IGLV5-45A0A087WSX0 123 aa5.37□□□□□ -1.55
NEDD9-208ENST00000504387 FASNP49327 2511 aaKnown RBP5.37□□□□□ -1.55
NEDD9-208ENST00000504387 K7EQD1 137 aa5.36□□□□□ -1.55
NEDD9-208ENST00000504387 ORMDL1Q9P0S3 153 aa5.36□□□□□ -1.55
NEDD9-208ENST00000504387 M0R2N4 97 aa5.36□□□□□ -1.55
NEDD9-208ENST00000504387 TMEM89A2RUT3 159 aa5.36□□□□□ -1.55
NEDD9-208ENST00000504387 C1orf43Q9BWL3 253 aa5.36□□□□□ -1.55
NEDD9-208ENST00000504387 LAMTOR3Q9UHA4 124 aa5.36□□□□□ -1.55
NEDD9-208ENST00000504387 A0A0U1RQV1 116 aa5.35□□□□□ -1.55
NEDD9-208ENST00000504387 C1orf158Q8N1D5 194 aa5.35□□□□□ -1.55
NEDD9-208ENST00000504387 UPK3BQ9BT76 320 aa5.35□□□□□ -1.55
NEDD9-208ENST00000504387 TMEM258P61165 79 aa5.35□□□□□ -1.55
NEDD9-208ENST00000504387 SPATA3Q8NHX4 192 aa5.35□□□□□ -1.55
NEDD9-208ENST00000504387 DEFB4AO15263 64 aa5.35□□□□□ -1.55
NEDD9-208ENST00000504387 FAM222AQ5U5X8 452 aa5.35□□□□□ -1.55
NEDD9-208ENST00000504387 Q6JHZ5 121 aa5.35□□□□□ -1.55
NEDD9-208ENST00000504387 RMI2Q96E14 147 aa5.35□□□□□ -1.55
NEDD9-208ENST00000504387 IGHV4-31P0DP07 118 aa5.34□□□□□ -1.55
NEDD9-208ENST00000504387 DEFB114Q30KQ6 69 aa5.34□□□□□ -1.55
NEDD9-208ENST00000504387 Q5XG85 94 aa5.34□□□□□ -1.55
NEDD9-208ENST00000504387 Q8N3U1 123 aa5.34□□□□□ -1.55
NEDD9-208ENST00000504387 Q6YL49 198 aa5.34□□□□□ -1.56
NEDD9-208ENST00000504387 ITPR2Q14571 2701 aa5.34□□□□□ -1.56
NEDD9-208ENST00000504387 HTN3P15516 51 aa5.33□□□□□ -1.56
NEDD9-208ENST00000504387 SS18Q15532 418 aa5.33□□□□□ -1.56
NEDD9-208ENST00000504387 C6orf99Q4VX62 202 aa5.33□□□□□ -1.56
NEDD9-208ENST00000504387 TRAV10A0A0B4J240 114 aa5.33□□□□□ -1.56
NEDD9-208ENST00000504387 TRAV25A0A0B4J276 109 aa5.33□□□□□ -1.56
NEDD9-208ENST00000504387 CCL24O00175 119 aa5.33□□□□□ -1.56
NEDD9-208ENST00000504387 DSCR9P59020 149 aa5.33□□□□□ -1.56
NEDD9-208ENST00000504387 ODF3L2Q3SX64 289 aa5.33□□□□□ -1.56
NEDD9-208ENST00000504387 H0YGX0 51 aa5.33□□□□□ -1.56
NEDD9-208ENST00000504387 PRB2P02812 416 aaPredicted RBP5.33□□□□□ -1.56
NEDD9-208ENST00000504387 LINC00336Q6ZUF6 198 aa5.33□□□□□ -1.56
NEDD9-208ENST00000504387 LINC00269Q8N2A0 174 aa5.33□□□□□ -1.56
NEDD9-208ENST00000504387 UBL5Q9BZL1 73 aa5.33□□□□□ -1.56
NEDD9-208ENST00000504387 CCKP06307 115 aa5.32□□□□□ -1.56
NEDD9-208ENST00000504387 LINC00474Q9P2X8 69 aa5.32□□□□□ -1.56
NEDD9-208ENST00000504387 DAD1P61803 113 aa5.32□□□□□ -1.56
NEDD9-208ENST00000504387 MPLKIPQ8TAP9 179 aa5.32□□□□□ -1.56
NEDD9-208ENST00000504387 S100A7L2Q5SY68 101 aa5.31□□□□□ -1.56
NEDD9-208ENST00000504387 ATRQ13535 2644 aa5.31□□□□□ -1.56
NEDD9-208ENST00000504387 FAM236DA0A1B0GTK5 79 aa5.31□□□□□ -1.56
NEDD9-208ENST00000504387 FAM236CP0DP71 79 aa5.31□□□□□ -1.56
NEDD9-208ENST00000504387 RBM3P98179 157 aaKnown RBP5.31□□□□□ -1.56
NEDD9-208ENST00000504387 TMEM86BQ8N661 226 aa5.31□□□□□ -1.56
NEDD9-208ENST00000504387 Q8N9L7 120 aa5.31□□□□□ -1.56
NEDD9-208ENST00000504387 IGHV3OR16-9A0A0B4J2B5 98 aa5.31□□□□□ -1.56
NEDD9-208ENST00000504387 RPS28P62857 69 aaKnown RBP5.31□□□□□ -1.56
NEDD9-208ENST00000504387 BBC3Q96PG8 261 aaPredicted RBP5.31□□□□□ -1.56
NEDD9-208ENST00000504387 UBR5O95071 2799 aaPredicted RBP5.3□□□□□ -1.56
NEDD9-208ENST00000504387 HELZ2Q9BYK8 2649 aaKnown RBP5.3□□□□□ -1.56
NEDD9-208ENST00000504387 TRBV6-4A0A1B0GX49 114 aa5.3□□□□□ -1.56
NEDD9-208ENST00000504387 F8WEM9 126 aa5.3□□□□□ -1.56
NEDD9-208ENST00000504387 ZNF843Q8N446 348 aa5.3□□□□□ -1.56
NEDD9-208ENST00000504387 ZNF469Q96JG9 3925 aaPredicted RBP5.3□□□□□ -1.56
NEDD9-208ENST00000504387 LRCOL1A6NCL2 159 aa5.3□□□□□ -1.56
NEDD9-208ENST00000504387 Q8N814 137 aa5.3□□□□□ -1.56
NEDD9-208ENST00000504387 A0A096LNT2 108 aa5.29□□□□□ -1.56
NEDD9-208ENST00000504387 J3QLI3 93 aa5.29□□□□□ -1.56
NEDD9-208ENST00000504387 DEFB113Q30KQ7 82 aa5.29□□□□□ -1.56
NEDD9-208ENST00000504387 LINC00959A0A1B0GUT2 108 aa5.29□□□□□ -1.56
NEDD9-208ENST00000504387 DNAJC9-AS1A6NH13 148 aa5.29□□□□□ -1.56
NEDD9-208ENST00000504387 C4orf48Q5BLP8 95 aa5.29□□□□□ -1.56
NEDD9-208ENST00000504387 C4orf3Q8WVX3 66 aa5.29□□□□□ -1.56
NEDD9-208ENST00000504387 OVOL2Q9BRP0 275 aa5.29□□□□□ -1.56
NEDD9-208ENST00000504387 UNC79Q9P2D8 2635 aa5.29□□□□□ -1.56
NEDD9-208ENST00000504387 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.29□□□□□ -1.56
NEDD9-208ENST00000504387 C6orf223Q8N319 242 aa5.29□□□□□ -1.56
NEDD9-208ENST00000504387 Q8NDZ9 215 aa5.29□□□□□ -1.56
NEDD9-208ENST00000504387 BRK1Q8WUW1 75 aa5.29□□□□□ -1.56
NEDD9-208ENST00000504387 TRBV6-8A0A0A6YYG3 113 aa5.28□□□□□ -1.56
NEDD9-208ENST00000504387 IBA57-AS1B1ANH7 110 aa5.28□□□□□ -1.56
NEDD9-208ENST00000504387 MRAPQ8TCY5 172 aa5.28□□□□□ -1.56
NEDD9-208ENST00000504387 XAGE1AQ9HD64 81 aa5.28□□□□□ -1.56
NEDD9-208ENST00000504387 GYPEP15421 78 aa5.27□□□□□ -1.57
NEDD9-208ENST00000504387 TMEM256-PLSCR3K7ERE1 68 aa5.27□□□□□ -1.57
NEDD9-208ENST00000504387 NANOS2P60321 138 aaKnown RBP5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 240 ms