RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 BIN3Q9NQY0 253 aa6.7□□□□□ -1.34
LSM6-204ENST00000504181 IGLV5-37A0A075B6J1 123 aa6.69□□□□□ -1.34
LSM6-204ENST00000504181 C9orf92A6NGG3 77 aa6.69□□□□□ -1.34
LSM6-204ENST00000504181 RAB4AP20338 218 aa6.69□□□□□ -1.34
LSM6-204ENST00000504181 LINC00310P59036 64 aa6.69□□□□□ -1.34
LSM6-204ENST00000504181 SUMO2P61956 95 aaKnown RBP6.69□□□□□ -1.34
LSM6-204ENST00000504181 MRPS36P82909 103 aaKnown RBP6.69□□□□□ -1.34
LSM6-204ENST00000504181 Q5BKY6 102 aa6.69□□□□□ -1.34
LSM6-204ENST00000504181 MBD3L1Q8WWY6 194 aa6.69□□□□□ -1.34
LSM6-204ENST00000504181 GNB1LQ9BYB4 327 aa6.69□□□□□ -1.34
LSM6-204ENST00000504181 RPS29P62273 56 aaKnown RBP6.68□□□□□ -1.34
LSM6-204ENST00000504181 AMN1Q8IY45 258 aa6.68□□□□□ -1.34
LSM6-204ENST00000504181 SPANXA1Q9NS26 97 aa6.68□□□□□ -1.34
LSM6-204ENST00000504181 Q8IZM0 81 aa6.67□□□□□ -1.34
LSM6-204ENST00000504181 NRACQ8N912 160 aa6.67□□□□□ -1.34
LSM6-204ENST00000504181 ALKBH7Q9BT30 221 aaPredicted RBP6.67□□□□□ -1.34
LSM6-204ENST00000504181 FXYD6-FXYD2A0A087WZ82 144 aa6.66□□□□□ -1.34
LSM6-204ENST00000504181 F8VRH5 84 aa6.66□□□□□ -1.34
LSM6-204ENST00000504181 Q6ZN92 141 aa6.66□□□□□ -1.34
LSM6-204ENST00000504181 LINC01561Q8N1V8 128 aa6.66□□□□□ -1.34
LSM6-204ENST00000504181 TMEM191AQ9H0A3 160 aa6.66□□□□□ -1.34
LSM6-204ENST00000504181 GNG13Q9P2W3 67 aa6.66□□□□□ -1.34
LSM6-204ENST00000504181 M0R378 163 aa6.65□□□□□ -1.34
LSM6-204ENST00000504181 KRTAP4-9Q9BYQ8 210 aa6.65□□□□□ -1.34
LSM6-204ENST00000504181 K7EN84 100 aa6.64□□□□□ -1.35
LSM6-204ENST00000504181 KRTAP20-1Q3LI63 56 aa6.64□□□□□ -1.35
LSM6-204ENST00000504181 BORCS7Q96B45 105 aa6.64□□□□□ -1.35
LSM6-204ENST00000504181 MANBALQ9NQG1 85 aa6.64□□□□□ -1.35
LSM6-204ENST00000504181 ZNF706Q9Y5V0 76 aaPredicted RBP6.64□□□□□ -1.35
LSM6-204ENST00000504181 PPP1R2P9O14990 202 aa6.63□□□□□ -1.35
LSM6-204ENST00000504181 Q6Q795 121 aa6.63□□□□□ -1.35
LSM6-204ENST00000504181 LINC00846Q9NV44 126 aa6.63□□□□□ -1.35
LSM6-204ENST00000504181 PPP1R17O96001 155 aa6.62□□□□□ -1.35
LSM6-204ENST00000504181 MOBPQ13875 183 aa6.62□□□□□ -1.35
LSM6-204ENST00000504181 MED9Q9NWA0 146 aa6.62□□□□□ -1.35
LSM6-204ENST00000504181 IGLV9-49A0A0B4J1Y8 123 aa6.61□□□□□ -1.35
LSM6-204ENST00000504181 GATCO43716 136 aaKnown RBP6.61□□□□□ -1.35
LSM6-204ENST00000504181 IGLV4-3A0A075B6K6 122 aa6.6□□□□□ -1.35
LSM6-204ENST00000504181 A0A1B0GUT8 65 aa6.6□□□□□ -1.35
LSM6-204ENST00000504181 A8MWL6 223 aa6.6□□□□□ -1.35
LSM6-204ENST00000504181 IFI27P40305 119 aaPredicted RBP6.6□□□□□ -1.35
LSM6-204ENST00000504181 RAB5BP61020 215 aa6.6□□□□□ -1.35
LSM6-204ENST00000504181 IFITM3Q01628 133 aa6.6□□□□□ -1.35
LSM6-204ENST00000504181 TCAPO15273 167 aa6.59□□□□□ -1.35
LSM6-204ENST00000504181 ZC2HC1BQ5TFG8 222 aa6.59□□□□□ -1.35
LSM6-204ENST00000504181 OCC1Q8TAD7 63 aa6.59□□□□□ -1.35
LSM6-204ENST00000504181 TMEM141Q96I45 108 aa6.59□□□□□ -1.35
LSM6-204ENST00000504181 GEMIN7Q9H840 131 aaKnown RBP6.59□□□□□ -1.35
LSM6-204ENST00000504181 NEBP20929 6669 aa6.59□□□□□ -1.36
LSM6-204ENST00000504181 UMAD1C9J7I0 102 aa6.58□□□□□ -1.36
LSM6-204ENST00000504181 PDE6DO43924 150 aa6.58□□□□□ -1.36
LSM6-204ENST00000504181 GIPP09681 153 aaPredicted RBP6.58□□□□□ -1.36
LSM6-204ENST00000504181 TEX43Q6ZNM6 134 aa6.58□□□□□ -1.36
LSM6-204ENST00000504181 LINC01551Q86U37 167 aa6.58□□□□□ -1.36
LSM6-204ENST00000504181 MT2AP02795 61 aa6.57□□□□□ -1.36
LSM6-204ENST00000504181 CXCL5P42830 114 aa6.57□□□□□ -1.36
LSM6-204ENST00000504181 KRTAP19-6Q3LI70 58 aa6.57□□□□□ -1.36
LSM6-204ENST00000504181 HIGD1CA8MV81 97 aa6.56□□□□□ -1.36
LSM6-204ENST00000504181 IGLV6-57P01721 117 aa6.56□□□□□ -1.36
LSM6-204ENST00000504181 VPREB1P12018 145 aa6.56□□□□□ -1.36
LSM6-204ENST00000504181 MRPL51Q4U2R6 128 aaKnown RBP6.56□□□□□ -1.36
LSM6-204ENST00000504181 C20orf78Q9BR46 151 aa6.56□□□□□ -1.36
LSM6-204ENST00000504181 C2orf88Q9BSF0 95 aa6.56□□□□□ -1.36
LSM6-204ENST00000504181 SMIM2Q9BVW6 85 aa6.56□□□□□ -1.36
LSM6-204ENST00000504181 EIF5A2Q9GZV4 153 aaKnown RBP6.56□□□□□ -1.36
LSM6-204ENST00000504181 FAM231DQ6ZW35 169 aa6.55□□□□□ -1.36
LSM6-204ENST00000504181 SSBP3-AS1Q7Z2R9 100 aa6.55□□□□□ -1.36
LSM6-204ENST00000504181 PYGO1Q9Y3Y4 419 aa6.55□□□□□ -1.36
LSM6-204ENST00000504181 ARPC5O15511 151 aa6.54□□□□□ -1.36
LSM6-204ENST00000504181 LINC00483Q53H64 154 aa6.54□□□□□ -1.36
LSM6-204ENST00000504181 SMCR5Q8TEV8 140 aa6.54□□□□□ -1.36
LSM6-204ENST00000504181 KRTAP9-3Q9BYQ3 159 aa6.54□□□□□ -1.36
LSM6-204ENST00000504181 CDKN2A-AS1Q9UH64 79 aa6.54□□□□□ -1.36
LSM6-204ENST00000504181 RPL37P61927 97 aaKnown RBP6.53□□□□□ -1.36
LSM6-204ENST00000504181 ANKRD39Q53RE8 183 aa6.53□□□□□ -1.36
LSM6-204ENST00000504181 GAGE2AQ6NT46 116 aa6.53□□□□□ -1.36
LSM6-204ENST00000504181 S100ZQ8WXG8 99 aa6.53□□□□□ -1.36
LSM6-204ENST00000504181 TIMM17AQ99595 171 aa6.53□□□□□ -1.36
LSM6-204ENST00000504181 TRBV24-1A0A075B6N3 115 aa6.52□□□□□ -1.37
LSM6-204ENST00000504181 MT1FP04733 61 aa6.52□□□□□ -1.37
LSM6-204ENST00000504181 NPSP0C0P6 89 aa6.52□□□□□ -1.37
LSM6-204ENST00000504181 CT83Q5H943 113 aa6.52□□□□□ -1.37
LSM6-204ENST00000504181 AKAP14Q86UN6 197 aa6.52□□□□□ -1.37
LSM6-204ENST00000504181 MUC12Q9UKN1 5478 aa6.51□□□□□ -1.37
LSM6-204ENST00000504181 CKS2P33552 79 aa6.51□□□□□ -1.37
LSM6-204ENST00000504181 RAB14P61106 215 aa6.5□□□□□ -1.37
LSM6-204ENST00000504181 RIGQ13278 110 aa6.5□□□□□ -1.37
LSM6-204ENST00000504181 FAM104BQ5XKR9 115 aa6.5□□□□□ -1.37
LSM6-204ENST00000504181 Q8NDZ9 215 aa6.5□□□□□ -1.37
LSM6-204ENST00000504181 COX7B2Q8TF08 81 aa6.5□□□□□ -1.37
LSM6-204ENST00000504181 LINC00862A6NCI5 91 aa6.49□□□□□ -1.37
LSM6-204ENST00000504181 HERVK_113P63121 156 aa6.49□□□□□ -1.37
LSM6-204ENST00000504181 FAM19A3Q7Z5A8 133 aa6.49□□□□□ -1.37
LSM6-204ENST00000504181 AMELXQ99217 191 aa6.49□□□□□ -1.37
LSM6-204ENST00000504181 SMIM1B2RUZ4 78 aa6.48□□□□□ -1.37
LSM6-204ENST00000504181 NPYP01303 97 aa6.48□□□□□ -1.37
LSM6-204ENST00000504181 PFN2P35080 140 aa6.48□□□□□ -1.37
LSM6-204ENST00000504181 RPL24P83731 157 aaKnown RBP6.48□□□□□ -1.37
LSM6-204ENST00000504181 C2orf66Q6UXQ4 117 aa6.48□□□□□ -1.37
LSM6-204ENST00000504181 VCX2Q9H322 139 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms