RNA–Protein interactions for RNA: ENST00000504178.1

SYNPO2-205, Transcript of synaptopodin 2, humanhuman

TSL 1 (best)

Gene SYNPO2, Length 6,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-205ENST00000504178 XGP55808 180 aa5.07□□□□□ -1.6
SYNPO2-205ENST00000504178 Q6ZRU5 148 aa5.07□□□□□ -1.6
SYNPO2-205ENST00000504178 LIMD2Q9BT23 127 aa5.07□□□□□ -1.6
SYNPO2-205ENST00000504178 TANC2Q9HCD6 1990 aa5.07□□□□□ -1.6
SYNPO2-205ENST00000504178 TRAV7A0A075B6U4 112 aa5.07□□□□□ -1.6
SYNPO2-205ENST00000504178 PRUNE2Q8WUY3 3088 aa5.07□□□□□ -1.6
SYNPO2-205ENST00000504178 SZT2Q5T011 3432 aa5.07□□□□□ -1.6
SYNPO2-205ENST00000504178 LINC01547P58512 204 aaPredicted RBP5.06□□□□□ -1.6
SYNPO2-205ENST00000504178 COX8CQ7Z4L0 72 aa5.06□□□□□ -1.6
SYNPO2-205ENST00000504178 TRBV7-6A0A0J9YX20 115 aa5.06□□□□□ -1.6
SYNPO2-205ENST00000504178 DEFB116Q30KQ4 102 aa5.06□□□□□ -1.6
SYNPO2-205ENST00000504178 LINC00575Q6W349 94 aa5.06□□□□□ -1.6
SYNPO2-205ENST00000504178 PCOTHQ58A44 107 aa5.06□□□□□ -1.6
SYNPO2-205ENST00000504178 LINC00310P59036 64 aa5.05□□□□□ -1.6
SYNPO2-205ENST00000504178 PRLHP81277 87 aa5.05□□□□□ -1.6
SYNPO2-205ENST00000504178 A0A087WSZ3 146 aa5.05□□□□□ -1.6
SYNPO2-205ENST00000504178 H0Y9P7 68 aa5.05□□□□□ -1.6
SYNPO2-205ENST00000504178 Q8N2B8 174 aa5.05□□□□□ -1.6
SYNPO2-205ENST00000504178 SBSPONQ8IVN8 264 aa5.05□□□□□ -1.6
SYNPO2-205ENST00000504178 SHANK1Q9Y566 2161 aa5.05□□□□□ -1.6
SYNPO2-205ENST00000504178 C22orf24Q9Y442 160 aa5.05□□□□□ -1.6
SYNPO2-205ENST00000504178 HCFC1P51610 2035 aa5.04□□□□□ -1.6
SYNPO2-205ENST00000504178 SPINK1P00995 79 aa5.04□□□□□ -1.6
SYNPO2-205ENST00000504178 A0A087WVE0 104 aa5.04□□□□□ -1.6
SYNPO2-205ENST00000504178 Q6Q795 121 aa5.04□□□□□ -1.6
SYNPO2-205ENST00000504178 SMCR5Q8TEV8 140 aa5.04□□□□□ -1.6
SYNPO2-205ENST00000504178 LAMA2P24043 3122 aaKnown RBP5.04□□□□□ -1.6
SYNPO2-205ENST00000504178 DSCAML1Q8TD84 2053 aa5.03□□□□□ -1.6
SYNPO2-205ENST00000504178 HCG22E2RYF7 251 aa5.03□□□□□ -1.6
SYNPO2-205ENST00000504178 A8MTW9 85 aa5.03□□□□□ -1.6
SYNPO2-205ENST00000504178 COL4A2P08572 1712 aa5.03□□□□□ -1.6
SYNPO2-205ENST00000504178 OTOGLQ3ZCN5 2332 aa5.02□□□□□ -1.61
SYNPO2-205ENST00000504178 WDR87Q6ZQQ6 2873 aa5.02□□□□□ -1.61
SYNPO2-205ENST00000504178 LINC00337Q8N6G1 96 aa5.02□□□□□ -1.61
SYNPO2-205ENST00000504178 C11orf72Q8NBR9 251 aa5.02□□□□□ -1.61
SYNPO2-205ENST00000504178 ABCA1O95477 2261 aa5.02□□□□□ -1.61
SYNPO2-205ENST00000504178 EML5Q05BV3 1969 aa5.02□□□□□ -1.61
SYNPO2-205ENST00000504178 EXPH5Q8NEV8 1989 aa5.02□□□□□ -1.61
SYNPO2-205ENST00000504178 TRBV7-7A0A0K0K1E9 115 aa5.01□□□□□ -1.61
SYNPO2-205ENST00000504178 Q8N3U1 123 aa5.01□□□□□ -1.61
SYNPO2-205ENST00000504178 BDP1A6H8Y1 2624 aa5.01□□□□□ -1.61
SYNPO2-205ENST00000504178 A0A096LNJ9 63 aa5.01□□□□□ -1.61
SYNPO2-205ENST00000504178 SMIM26A0A096LP01 95 aa5.01□□□□□ -1.61
SYNPO2-205ENST00000504178 SOSTDC1Q6X4U4 206 aa5.01□□□□□ -1.61
SYNPO2-205ENST00000504178 KIAA0087Q14695 138 aa4.99□□□□□ -1.61
SYNPO2-205ENST00000504178 C7orf65Q6ZTY9 151 aa4.99□□□□□ -1.61
SYNPO2-205ENST00000504178 LINC01546A6NGU7 62 aa4.99□□□□□ -1.61
SYNPO2-205ENST00000504178 DNAH14Q0VDD8 3507 aa4.98□□□□□ -1.61
SYNPO2-205ENST00000504178 C1orf195Q5TG92 126 aa4.98□□□□□ -1.61
SYNPO2-205ENST00000504178 CRYGAP11844 174 aa4.98□□□□□ -1.61
SYNPO2-205ENST00000504178 FAM19A4Q96LR4 140 aa4.98□□□□□ -1.61
SYNPO2-205ENST00000504178 KIF25-AS1Q9Y6Z4 181 aa4.98□□□□□ -1.61
SYNPO2-205ENST00000504178 HIVEP2P31629 2446 aa4.98□□□□□ -1.61
SYNPO2-205ENST00000504178 SPACA4Q8TDM5 124 aa4.98□□□□□ -1.61
SYNPO2-205ENST00000504178 IGKV2D-30A0A075B6S6 120 aa4.98□□□□□ -1.61
SYNPO2-205ENST00000504178 IGKV2-30P06310 120 aa4.98□□□□□ -1.61
SYNPO2-205ENST00000504178 MOBPQ13875 183 aa4.98□□□□□ -1.61
SYNPO2-205ENST00000504178 DOPEY2Q9Y3R5 2298 aa4.97□□□□□ -1.61
SYNPO2-205ENST00000504178 LINC00167Q96N53 147 aa4.97□□□□□ -1.61
SYNPO2-205ENST00000504178 RTL8CO15255 209 aa4.97□□□□□ -1.61
SYNPO2-205ENST00000504178 C6orf48Q9UBA6 75 aa4.97□□□□□ -1.61
SYNPO2-205ENST00000504178 EYSQ5T1H1 3165 aa4.97□□□□□ -1.61
SYNPO2-205ENST00000504178 IGLV5-39A0A0G2JS06 123 aa4.96□□□□□ -1.61
SYNPO2-205ENST00000504178 CXCL6P80162 114 aa4.96□□□□□ -1.61
SYNPO2-205ENST00000504178 SMIM29Q86T20 159 aa4.96□□□□□ -1.62
SYNPO2-205ENST00000504178 C1orf64Q8NEQ6 169 aa4.96□□□□□ -1.62
SYNPO2-205ENST00000504178 KRTAP24-1Q3LI83 254 aa4.96□□□□□ -1.62
SYNPO2-205ENST00000504178 LINC00846Q9NV44 126 aa4.96□□□□□ -1.62
SYNPO2-205ENST00000504178 hDV103S1A0JD37 113 aa4.96□□□□□ -1.62
SYNPO2-205ENST00000504178 PSPHP1O15172 72 aa4.96□□□□□ -1.62
SYNPO2-205ENST00000504178 PHF5AQ7RTV0 110 aaKnown RBP4.96□□□□□ -1.62
SYNPO2-205ENST00000504178 VCANP13611 3396 aa4.96□□□□□ -1.62
SYNPO2-205ENST00000504178 H3BNG1 76 aa4.96□□□□□ -1.62
SYNPO2-205ENST00000504178 RANBP2P49792 3224 aaKnown RBP4.96□□□□□ -1.62
SYNPO2-205ENST00000504178 FAM229AH3BQW9 127 aa4.96□□□□□ -1.62
SYNPO2-205ENST00000504178 PTPRQQ9UMZ3 2332 aa4.95□□□□□ -1.62
SYNPO2-205ENST00000504178 A0A0C4DFX4 3053 aa4.95□□□□□ -1.62
SYNPO2-205ENST00000504178 LINC00315P59091 139 aa4.95□□□□□ -1.62
SYNPO2-205ENST00000504178 SPTAN1Q13813 2472 aaKnown RBP4.95□□□□□ -1.62
SYNPO2-205ENST00000504178 SPATA3Q8NHX4 192 aa4.95□□□□□ -1.62
SYNPO2-205ENST00000504178 TMEM254Q8TBM7 123 aa4.95□□□□□ -1.62
SYNPO2-205ENST00000504178 UNC80Q8N2C7 3258 aa4.95□□□□□ -1.62
SYNPO2-205ENST00000504178 COL27A1Q8IZC6 1860 aaPredicted RBP4.94□□□□□ -1.62
SYNPO2-205ENST00000504178 CHTF8P0CG12 524 aa4.94□□□□□ -1.62
SYNPO2-205ENST00000504178 TET2Q6N021 2002 aaPredicted RBP4.94□□□□□ -1.62
SYNPO2-205ENST00000504178 SERTAD4-AS1Q5TG53 156 aa4.94□□□□□ -1.62
SYNPO2-205ENST00000504178 CREBBPQ92793 2442 aa4.94□□□□□ -1.62
SYNPO2-205ENST00000504178 PMAIP1Q13794 54 aa4.94□□□□□ -1.62
SYNPO2-205ENST00000504178 NBDYA0A0U1RRE5 68 aa4.93□□□□□ -1.62
SYNPO2-205ENST00000504178 ELOF1P60002 83 aaKnown RBP4.93□□□□□ -1.62
SYNPO2-205ENST00000504178 CUL9Q8IWT3 2517 aa4.93□□□□□ -1.62
SYNPO2-205ENST00000504178 USP34Q70CQ2 3546 aa4.93□□□□□ -1.62
SYNPO2-205ENST00000504178 IGHV3OR16-9A0A0B4J2B5 98 aa4.93□□□□□ -1.62
SYNPO2-205ENST00000504178 Q9UF83 564 aa4.93□□□□□ -1.62
SYNPO2-205ENST00000504178 ARHGAP32A7KAX9 2087 aa4.93□□□□□ -1.62
SYNPO2-205ENST00000504178 Q8NBF4 154 aa4.92□□□□□ -1.62
SYNPO2-205ENST00000504178 C16orf90A8MZG2 172 aa4.92□□□□□ -1.62
SYNPO2-205ENST00000504178 TYMSOSQ8TAI1 123 aa4.92□□□□□ -1.62
SYNPO2-205ENST00000504178 TP53AIP1Q9HCN2 124 aa4.92□□□□□ -1.62
SYNPO2-205ENST00000504178 LINC00588Q9Y4M8 146 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms