RNA–Protein interactions for RNA: ENST00000503982.1

LSM6-203, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 820 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-203ENST00000503982 BAGE3Q86Y29 109 aa13.71□□□□□ -0.21
LSM6-203ENST00000503982 A0A1W2PNN7 141 aa13.7□□□□□ -0.22
LSM6-203ENST00000503982 ATP5LO75964 103 aa13.7□□□□□ -0.22
LSM6-203ENST00000503982 RNF151Q2KHN1 245 aa13.7□□□□□ -0.22
LSM6-203ENST00000503982 A0A087WZ39 114 aa13.69□□□□□ -0.22
LSM6-203ENST00000503982 HIST1H2BKO60814 126 aa13.68□□□□□ -0.22
LSM6-203ENST00000503982 HSBP1O75506 76 aa13.68□□□□□ -0.22
LSM6-203ENST00000503982 HIST1H2BJP06899 126 aa13.68□□□□□ -0.22
LSM6-203ENST00000503982 HIST1H2BOP23527 126 aa13.68□□□□□ -0.22
LSM6-203ENST00000503982 HIST1H2BBP33778 126 aa13.68□□□□□ -0.22
LSM6-203ENST00000503982 HIST1H2BDP58876 126 aa13.68□□□□□ -0.22
LSM6-203ENST00000503982 HIST1H2BCP62807 126 aa13.68□□□□□ -0.22
LSM6-203ENST00000503982 PMVKQ15126 192 aa13.68□□□□□ -0.22
LSM6-203ENST00000503982 HIST2H2BEQ16778 126 aa13.68□□□□□ -0.22
LSM6-203ENST00000503982 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.68□□□□□ -0.22
LSM6-203ENST00000503982 HIST1H2BHQ93079 126 aa13.68□□□□□ -0.22
LSM6-203ENST00000503982 LINC01600Q96MT4 127 aa13.68□□□□□ -0.22
LSM6-203ENST00000503982 HIST1H2BNQ99877 126 aa13.68□□□□□ -0.22
LSM6-203ENST00000503982 HIST1H2BMQ99879 126 aa13.68□□□□□ -0.22
LSM6-203ENST00000503982 CST9LQ9H4G1 147 aa13.68□□□□□ -0.22
LSM6-203ENST00000503982 MRPL35Q9NZE8 188 aaKnown RBP13.68□□□□□ -0.22
LSM6-203ENST00000503982 F8WDY8 70 aa13.67□□□□□ -0.22
LSM6-203ENST00000503982 SERF1AO75920 110 aa13.67□□□□□ -0.22
LSM6-203ENST00000503982 PMCHL1Q16048 86 aa13.67□□□□□ -0.22
LSM6-203ENST00000503982 ZC2HC1BQ5TFG8 222 aa13.67□□□□□ -0.22
LSM6-203ENST00000503982 HERVK_113P63121 156 aa13.66□□□□□ -0.22
LSM6-203ENST00000503982 PHF5AQ7RTV0 110 aaKnown RBP13.66□□□□□ -0.22
LSM6-203ENST00000503982 IGLV5-45A0A087WSX0 123 aa13.65□□□□□ -0.22
LSM6-203ENST00000503982 TINCRA0A1B0GVN0 87 aa13.65□□□□□ -0.22
LSM6-203ENST00000503982 UNQ6190/PRO20217Q6UXQ8 127 aa13.65□□□□□ -0.22
LSM6-203ENST00000503982 GAGE2EQ4V326 116 aa13.63□□□□□ -0.23
LSM6-203ENST00000503982 COA6Q5JTJ3 125 aaKnown RBP13.63□□□□□ -0.23
LSM6-203ENST00000503982 C10orf25Q5T742 122 aa13.63□□□□□ -0.23
LSM6-203ENST00000503982 GAGE2DQ9UEU5 116 aa13.63□□□□□ -0.23
LSM6-203ENST00000503982 PSORS1C2Q9UIG4 136 aa13.63□□□□□ -0.23
LSM6-203ENST00000503982 C1orf137Q5JT78 98 aa13.62□□□□□ -0.23
LSM6-203ENST00000503982 C6orf48Q9UBA6 75 aa13.62□□□□□ -0.23
LSM6-203ENST00000503982 TNXBP22105 4242 aa13.61□□□□□ -0.23
LSM6-203ENST00000503982 TRAV12-1A0A0B4J245 112 aa13.61□□□□□ -0.23
LSM6-203ENST00000503982 FAM19A5Q7Z5A7 132 aaPredicted RBP13.61□□□□□ -0.23
LSM6-203ENST00000503982 UBR4Q5T4S7 5183 aa13.61□□□□□ -0.23
LSM6-203ENST00000503982 IGLC3P0DOY3 106 aa13.6□□□□□ -0.23
LSM6-203ENST00000503982 SRSF9Q13242 221 aaKnown RBP eCLIP13.6□□□□□ -0.23
LSM6-203ENST00000503982 IFI27L1Q96BM0 104 aa13.6□□□□□ -0.23
LSM6-203ENST00000503982 PACRGQ96M98 296 aaPredicted RBP13.6□□□□□ -0.23
LSM6-203ENST00000503982 NUPR1O60356 82 aa13.59□□□□□ -0.23
LSM6-203ENST00000503982 PRSS2P07478 247 aa13.59□□□□□ -0.23
LSM6-203ENST00000503982 FAM19A2Q8N3H0 131 aa13.59□□□□□ -0.23
LSM6-203ENST00000503982 GEMIN7Q9H840 131 aaKnown RBP13.59□□□□□ -0.23
LSM6-203ENST00000503982 FAM168BA1KXE4 195 aa13.58□□□□□ -0.24
LSM6-203ENST00000503982 TOMM7Q9P0U1 55 aa13.58□□□□□ -0.24
LSM6-203ENST00000503982 CDKN2A-AS1Q9UH64 79 aa13.58□□□□□ -0.24
LSM6-203ENST00000503982 LEPROTL1O95214 131 aa13.57□□□□□ -0.24
LSM6-203ENST00000503982 KIAA0087Q14695 138 aa13.57□□□□□ -0.24
LSM6-203ENST00000503982 C2orf82Q6UX34 121 aa13.57□□□□□ -0.24
LSM6-203ENST00000503982 TLX1NBP0CAT3 122 aa13.56□□□□□ -0.24
LSM6-203ENST00000503982 ODF1Q14990 250 aa13.56□□□□□ -0.24
LSM6-203ENST00000503982 HSPB8Q9UJY1 196 aa13.56□□□□□ -0.24
LSM6-203ENST00000503982 TRBV30A0A0K0K1B3 111 aa13.55□□□□□ -0.24
LSM6-203ENST00000503982 UBE2BP63146 152 aa13.55□□□□□ -0.24
LSM6-203ENST00000503982 CKS1BP61024 79 aa13.54□□□□□ -0.24
LSM6-203ENST00000503982 SMIM1B2RUZ4 78 aa13.53□□□□□ -0.24
LSM6-203ENST00000503982 Q8IZM0 81 aa13.53□□□□□ -0.24
LSM6-203ENST00000503982 LINC00469Q8N7U9 141 aa13.53□□□□□ -0.24
LSM6-203ENST00000503982 KRTAP10-8P60410 259 aa13.52□□□□□ -0.25
LSM6-203ENST00000503982 C6orf226Q5I0X4 101 aa13.52□□□□□ -0.25
LSM6-203ENST00000503982 NDUFC2-KCTD14E9PQ53 114 aa13.51□□□□□ -0.25
LSM6-203ENST00000503982 F8VRH5 84 aa13.51□□□□□ -0.25
LSM6-203ENST00000503982 H3BRM9 83 aa13.51□□□□□ -0.25
LSM6-203ENST00000503982 M0QXV9 152 aa13.51□□□□□ -0.25
LSM6-203ENST00000503982 IGLV7-43P04211 117 aa13.5□□□□□ -0.25
LSM6-203ENST00000503982 ZNF22P17026 224 aaPredicted RBP13.5□□□□□ -0.25
LSM6-203ENST00000503982 NDUFA6P56556 154 aa13.5□□□□□ -0.25
LSM6-203ENST00000503982 CHTOPQ9Y3Y2 248 aaKnown RBP13.5□□□□□ -0.25
LSM6-203ENST00000503982 DIRC1Q969H9 104 aa13.49□□□□□ -0.25
LSM6-203ENST00000503982 IGLV5-39A0A0G2JS06 123 aa13.48□□□□□ -0.25
LSM6-203ENST00000503982 C11orf86A6NJI1 115 aa13.48□□□□□ -0.25
LSM6-203ENST00000503982 CXCL5P42830 114 aa13.47□□□□□ -0.25
LSM6-203ENST00000503982 C9orf129Q5T035 196 aaKnown RBP13.45□□□□□ -0.26
LSM6-203ENST00000503982 KRTAP11-1Q8IUC1 163 aa13.45□□□□□ -0.26
LSM6-203ENST00000503982 FABP4P15090 132 aa13.44□□□□□ -0.26
LSM6-203ENST00000503982 MAP1LC3CQ9BXW4 147 aa13.44□□□□□ -0.26
LSM6-203ENST00000503982 SPINK8P0C7L1 97 aa13.42□□□□□ -0.26
LSM6-203ENST00000503982 PLNP26678 52 aa13.42□□□□□ -0.26
LSM6-203ENST00000503982 COX7B2Q8TF08 81 aa13.42□□□□□ -0.26
LSM6-203ENST00000503982 H0Y9J4 135 aa13.41□□□□□ -0.26
LSM6-203ENST00000503982 KRTAP7-1Q8IUC3 87 aa13.41□□□□□ -0.26
LSM6-203ENST00000503982 TMEM223A0PJW6 202 aa13.4□□□□□ -0.26
LSM6-203ENST00000503982 TMEM170BQ5T4T1 132 aa13.4□□□□□ -0.26
LSM6-203ENST00000503982 XAGE1AQ9HD64 81 aa13.4□□□□□ -0.26
LSM6-203ENST00000503982 SYS1-DBNDD2H3BUS1 97 aa13.39□□□□□ -0.27
LSM6-203ENST00000503982 SFTA2Q6UW10 78 aa13.39□□□□□ -0.27
LSM6-203ENST00000503982 PRR26Q8N8Z3 221 aa13.39□□□□□ -0.27
LSM6-203ENST00000503982 DPM2O94777 84 aa13.37□□□□□ -0.27
LSM6-203ENST00000503982 PET117Q6UWS5 81 aa13.37□□□□□ -0.27
LSM6-203ENST00000503982 LBHQ53QV2 105 aaPredicted RBP13.36□□□□□ -0.27
LSM6-203ENST00000503982 LINC01545Q5VT33 79 aa13.36□□□□□ -0.27
LSM6-203ENST00000503982 C22orf24Q9Y442 160 aa13.36□□□□□ -0.27
LSM6-203ENST00000503982 H0Y8G0 127 aa13.35□□□□□ -0.27
LSM6-203ENST00000503982 LRP2P98164 4655 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms