RNA–Protein interactions for RNA: ENST00000503678.5

SMN2-204, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 5

Gene SMN2, Length 761 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-204ENST00000503678 ETDBQ3ZM63 59 aa1.95□□□□□ -2.1
SMN2-204ENST00000503678 MINOS1Q5TGZ0 78 aa1.95□□□□□ -2.1
SMN2-204ENST00000503678 SOSTDC1Q6X4U4 206 aa1.95□□□□□ -2.1
SMN2-204ENST00000503678 TEN1Q86WV5 123 aa1.95□□□□□ -2.1
SMN2-204ENST00000503678 TMEM141Q96I45 108 aa1.95□□□□□ -2.1
SMN2-204ENST00000503678 SMIM2Q9BVW6 85 aa1.95□□□□□ -2.1
SMN2-204ENST00000503678 DPH3P1Q9H4G8 78 aa1.95□□□□□ -2.1
SMN2-204ENST00000503678 MRPL35Q9NZE8 188 aaKnown RBP1.95□□□□□ -2.1
SMN2-204ENST00000503678 CNOT1A5YKK6 2376 aaKnown RBP1.95□□□□□ -2.1
SMN2-204ENST00000503678 SPTBN1Q01082 2364 aaKnown RBP1.95□□□□□ -2.1
SMN2-204ENST00000503678 BAHCC1Q9P281 2608 aa1.95□□□□□ -2.1
SMN2-204ENST00000503678 CACNA1BQ00975 2339 aa1.94□□□□□ -2.1
SMN2-204ENST00000503678 TRBV7-3A0A075B6L6 115 aa1.94□□□□□ -2.1
SMN2-204ENST00000503678 IGKV2-40A0A087WW87 121 aaPredicted RBP1.94□□□□□ -2.1
SMN2-204ENST00000503678 IGKV2D-26A0A0A0MRZ7 120 aa1.94□□□□□ -2.1
SMN2-204ENST00000503678 TRBV7-1A0A0A6YYK4 115 aa1.94□□□□□ -2.1
SMN2-204ENST00000503678 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.94□□□□□ -2.1
SMN2-204ENST00000503678 TRAV21A0A0B4J279 112 aa1.94□□□□□ -2.1
SMN2-204ENST00000503678 LOC107984156A0A0G2JMH3 177 aa1.94□□□□□ -2.1
SMN2-204ENST00000503678 ZNF815PA8K554 130 aa1.94□□□□□ -2.1
SMN2-204ENST00000503678 M0R3E3 92 aa1.94□□□□□ -2.1
SMN2-204ENST00000503678 TIMM17BO60830 172 aa1.94□□□□□ -2.1
SMN2-204ENST00000503678 SNCGO76070 127 aa1.94□□□□□ -2.1
SMN2-204ENST00000503678 IGKV2D-40P01614 121 aaPredicted RBP1.94□□□□□ -2.1
SMN2-204ENST00000503678 COX6CP09669 75 aa1.94□□□□□ -2.1
SMN2-204ENST00000503678 UBE2D1P51668 147 aa1.94□□□□□ -2.1
SMN2-204ENST00000503678 WFDC2Q14508 124 aa1.94□□□□□ -2.1
SMN2-204ENST00000503678 KLK9Q2XQG4 91 aa1.94□□□□□ -2.1
SMN2-204ENST00000503678 DEFB109BQ30KR1 87 aa1.94□□□□□ -2.1
SMN2-204ENST00000503678 PCOTHQ58A44 107 aa1.94□□□□□ -2.1
SMN2-204ENST00000503678 SPRNQ5BIV9 151 aa1.94□□□□□ -2.1
SMN2-204ENST00000503678 CFAP126Q5VTH2 177 aa1.94□□□□□ -2.1
SMN2-204ENST00000503678 FP248Q71RG6 208 aaPredicted RBP1.94□□□□□ -2.1
SMN2-204ENST00000503678 ARL17AQ8IVW1 177 aa1.94□□□□□ -2.1
SMN2-204ENST00000503678 TEX29Q8N6K0 151 aa1.94□□□□□ -2.1
SMN2-204ENST00000503678 COPS9Q8WXC6 57 aa1.94□□□□□ -2.1
SMN2-204ENST00000503678 NAA38Q9BRA0 125 aaKnown RBP1.94□□□□□ -2.1
SMN2-204ENST00000503678 C14orf132Q9NPU4 83 aa1.94□□□□□ -2.1
SMN2-204ENST00000503678 KLK9Q9UKQ9 250 aa1.94□□□□□ -2.1
SMN2-204ENST00000503678 ERG28Q9UKR5 140 aa1.94□□□□□ -2.1
SMN2-204ENST00000503678 BRCA2P51587 3418 aa1.94□□□□□ -2.1
SMN2-204ENST00000503678 MUC4Q99102 2169 aa1.93□□□□□ -2.1
SMN2-204ENST00000503678 COL6A6A6NMZ7 2263 aa1.93□□□□□ -2.1
SMN2-204ENST00000503678 FAM223BA6NKX1 122 aa1.93□□□□□ -2.1
SMN2-204ENST00000503678 K7ERJ3 54 aa1.93□□□□□ -2.1
SMN2-204ENST00000503678 APELAP0DMC3 54 aa1.93□□□□□ -2.1
SMN2-204ENST00000503678 UBE2D3P61077 147 aa1.93□□□□□ -2.1
SMN2-204ENST00000503678 UBE2D2P62837 147 aa1.93□□□□□ -2.1
SMN2-204ENST00000503678 DIAPH2-AS1Q14236 149 aa1.93□□□□□ -2.1
SMN2-204ENST00000503678 RHOHQ15669 191 aa1.93□□□□□ -2.1
SMN2-204ENST00000503678 ATXN8Q156A1 80 aa1.93□□□□□ -2.1
SMN2-204ENST00000503678 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.93□□□□□ -2.1
SMN2-204ENST00000503678 Q6ZUT4 128 aa1.93□□□□□ -2.1
SMN2-204ENST00000503678 SBSPONQ8IVN8 264 aa1.93□□□□□ -2.1
SMN2-204ENST00000503678 FAM223AQ8IWN6 122 aa1.93□□□□□ -2.1
SMN2-204ENST00000503678 LINC01600Q96MT4 127 aa1.93□□□□□ -2.1
SMN2-204ENST00000503678 PRO1854Q9UHT4 67 aa1.93□□□□□ -2.1
SMN2-204ENST00000503678 ANKHD1Q8IWZ3 2542 aaKnown RBP1.93□□□□□ -2.1
SMN2-204ENST00000503678 SPTBN2O15020 2390 aa1.93□□□□□ -2.1
SMN2-204ENST00000503678 CACNA1HO95180 2353 aa1.93□□□□□ -2.1
SMN2-204ENST00000503678 MED13LQ71F56 2210 aa1.93□□□□□ -2.1
SMN2-204ENST00000503678 APC2O95996 2303 aa1.92□□□□□ -2.1
SMN2-204ENST00000503678 H3BUA1 57 aa1.92□□□□□ -2.1
SMN2-204ENST00000503678 H3BVH4 76 aa1.92□□□□□ -2.1
SMN2-204ENST00000503678 M0R2P5 195 aa1.92□□□□□ -2.1
SMN2-204ENST00000503678 ACYP1P07311 99 aa1.92□□□□□ -2.1
SMN2-204ENST00000503678 MGPP08493 103 aa1.92□□□□□ -2.1
SMN2-204ENST00000503678 IFITM1P13164 125 aa1.92□□□□□ -2.1
SMN2-204ENST00000503678 VMO1Q7Z5L0 202 aa1.92□□□□□ -2.1
SMN2-204ENST00000503678 NDUFA11Q86Y39 141 aa1.92□□□□□ -2.1
SMN2-204ENST00000503678 KRTAP13-1Q8IUC0 172 aa1.92□□□□□ -2.1
SMN2-204ENST00000503678 PRR15Q8IV56 129 aa1.92□□□□□ -2.1
SMN2-204ENST00000503678 Q8N6K4 173 aa1.92□□□□□ -2.1
SMN2-204ENST00000503678 Q8TAT8 98 aa1.92□□□□□ -2.1
SMN2-204ENST00000503678 ODF3Q96PU9 254 aa1.92□□□□□ -2.1
SMN2-204ENST00000503678 AGPAT4-IT1Q9H0P7 198 aa1.92□□□□□ -2.1
SMN2-204ENST00000503678 REV3LO60673 3130 aa1.91□□□□□ -2.1
SMN2-204ENST00000503678 LAMA2P24043 3122 aaKnown RBP1.91□□□□□ -2.1
SMN2-204ENST00000503678 MKI67P46013 3256 aaKnown RBP1.91□□□□□ -2.1
SMN2-204ENST00000503678 TRGV2A0A075B6R0 118 aa1.91□□□□□ -2.1
SMN2-204ENST00000503678 A0A0J9YY99 117 aa1.91□□□□□ -2.1
SMN2-204ENST00000503678 TRBV6-5A0A0K0K1A5 114 aa1.91□□□□□ -2.1
SMN2-204ENST00000503678 TRBV30A0A0K0K1B3 111 aa1.91□□□□□ -2.1
SMN2-204ENST00000503678 NDUFA4O00483 81 aa1.91□□□□□ -2.1
SMN2-204ENST00000503678 IGHV3-30P01768 117 aa1.91□□□□□ -2.1
SMN2-204ENST00000503678 IGHV3-30-5P0DP03 117 aa1.91□□□□□ -2.1
SMN2-204ENST00000503678 COX6B1P14854 86 aa1.91□□□□□ -2.1
SMN2-204ENST00000503678 EFNA4P52798 201 aa1.91□□□□□ -2.1
SMN2-204ENST00000503678 TMEM170BQ5T4T1 132 aa1.91□□□□□ -2.1
SMN2-204ENST00000503678 PHF5AQ7RTV0 110 aaKnown RBP1.91□□□□□ -2.1
SMN2-204ENST00000503678 USMG5Q96IX5 58 aa1.91□□□□□ -2.1
SMN2-204ENST00000503678 CARD19Q96LW7 228 aa1.91□□□□□ -2.1
SMN2-204ENST00000503678 PRO3102Q9H379 93 aa1.91□□□□□ -2.1
SMN2-204ENST00000503678 OTOGLQ3ZCN5 2332 aa1.91□□□□□ -2.1
SMN2-204ENST00000503678 TRAV2A0A0B4J234 112 aa1.9□□□□□ -2.11
SMN2-204ENST00000503678 TRBV27A0A0K0K1C4 114 aa1.9□□□□□ -2.11
SMN2-204ENST00000503678 IGIPA6NJ69 53 aa1.9□□□□□ -2.11
SMN2-204ENST00000503678 C9JAW5 83 aa1.9□□□□□ -2.11
SMN2-204ENST00000503678 IGHV3-33P01772 117 aa1.9□□□□□ -2.11
SMN2-204ENST00000503678 MT-ATP8P03928 68 aa1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms