RNA–Protein interactions for RNA: ENST00000502342.1

SMAD1-203, Transcript of SMAD family member 1, humanhuman

TSL 3

Gene SMAD1, Length 262 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-203ENST00000502342 APOC2P02655 101 aa-1.36□□□□□ -2.63
SMAD1-203ENST00000502342 LINC00474Q9P2X8 69 aa-1.36□□□□□ -2.63
SMAD1-203ENST00000502342 PAIP2BQ9ULR5 123 aaKnown RBP-1.36□□□□□ -2.63
SMAD1-203ENST00000502342 MYO18BQ8IUG5 2567 aa-1.36□□□□□ -2.63
SMAD1-203ENST00000502342 SCN7AQ01118 1682 aa-1.36□□□□□ -2.63
SMAD1-203ENST00000502342 A0A1B0GWA3 101 aa-1.37□□□□□ -2.63
SMAD1-203ENST00000502342 DNAH3Q8TD57 4116 aa-1.37□□□□□ -2.63
SMAD1-203ENST00000502342 PHLPP1O60346 1717 aa-1.37□□□□□ -2.63
SMAD1-203ENST00000502342 LOC100130705A0A1B0GUX0 176 aa-1.38□□□□□ -2.63
SMAD1-203ENST00000502342 I3L3M4 83 aa-1.38□□□□□ -2.63
SMAD1-203ENST00000502342 LINC00470Q9BZP3 86 aa-1.38□□□□□ -2.63
SMAD1-203ENST00000502342 CRIPTQ9P021 101 aa-1.38□□□□□ -2.63
SMAD1-203ENST00000502342 NLRP1Q9C000 1473 aa-1.38□□□□□ -2.63
SMAD1-203ENST00000502342 NAIPQ13075 1403 aa-1.39□□□□□ -2.63
SMAD1-203ENST00000502342 HTTP42858 3142 aa-1.39□□□□□ -2.63
SMAD1-203ENST00000502342 NUP188Q5SRE5 1749 aa-1.39□□□□□ -2.63
SMAD1-203ENST00000502342 H0YGG7 62 aa-1.39□□□□□ -2.63
SMAD1-203ENST00000502342 GNG7O60262 68 aa-1.39□□□□□ -2.63
SMAD1-203ENST00000502342 MANBALQ9NQG1 85 aa-1.39□□□□□ -2.63
SMAD1-203ENST00000502342 NKTRP30414 1462 aaKnown RBP-1.39□□□□□ -2.63
SMAD1-203ENST00000502342 ROBO1Q9Y6N7 1651 aa-1.39□□□□□ -2.63
SMAD1-203ENST00000502342 FAT3Q8TDW7 4589 aa-1.39□□□□□ -2.63
SMAD1-203ENST00000502342 AKAP13Q12802 2813 aa-1.39□□□□□ -2.63
SMAD1-203ENST00000502342 MUC17Q685J3 4493 aa-1.4□□□□□ -2.63
SMAD1-203ENST00000502342 TRAPPC2P0DI81 140 aa-1.4□□□□□ -2.63
SMAD1-203ENST00000502342 TRAPPC2BP0DI82 140 aa-1.4□□□□□ -2.63
SMAD1-203ENST00000502342 GNG11P61952 73 aa-1.4□□□□□ -2.63
SMAD1-203ENST00000502342 SELENOWP63302 87 aa-1.4□□□□□ -2.63
SMAD1-203ENST00000502342 C9orf153Q5TBE3 101 aa-1.4□□□□□ -2.63
SMAD1-203ENST00000502342 ZNF436-AS1Q8NC38 126 aaPredicted RBP-1.4□□□□□ -2.63
SMAD1-203ENST00000502342 SPRR2FQ96RM1 72 aa-1.4□□□□□ -2.63
SMAD1-203ENST00000502342 PLEKHH2Q8IVE3 1493 aa-1.4□□□□□ -2.63
SMAD1-203ENST00000502342 PRRC2CQ9Y520 2896 aaKnown RBP-1.4□□□□□ -2.63
SMAD1-203ENST00000502342 SLIT1O75093 1534 aa-1.4□□□□□ -2.63
SMAD1-203ENST00000502342 ADGRL2O95490 1459 aa-1.41□□□□□ -2.63
SMAD1-203ENST00000502342 KTN1Q86UP2 1357 aaKnown RBP-1.41□□□□□ -2.64
SMAD1-203ENST00000502342 FAM223BA6NKX1 122 aa-1.41□□□□□ -2.64
SMAD1-203ENST00000502342 BTG2P78543 158 aa-1.41□□□□□ -2.64
SMAD1-203ENST00000502342 SFTA2Q6UW10 78 aa-1.41□□□□□ -2.64
SMAD1-203ENST00000502342 MARF1Q9Y4F3 1742 aaKnown RBP-1.41□□□□□ -2.64
SMAD1-203ENST00000502342 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-1.41□□□□□ -2.64
SMAD1-203ENST00000502342 QRICH2Q9H0J4 1663 aa-1.42□□□□□ -2.64
SMAD1-203ENST00000502342 MBD5Q9P267 1494 aa-1.42□□□□□ -2.64
SMAD1-203ENST00000502342 DNAH9Q9NYC9 4486 aa-1.42□□□□□ -2.64
SMAD1-203ENST00000502342 A0A1B0GU69 56 aa-1.42□□□□□ -2.64
SMAD1-203ENST00000502342 F6UZH7 168 aa-1.42□□□□□ -2.64
SMAD1-203ENST00000502342 COX6CP09669 75 aa-1.42□□□□□ -2.64
SMAD1-203ENST00000502342 UBE2D3P61077 147 aa-1.42□□□□□ -2.64
SMAD1-203ENST00000502342 UBE2D2P62837 147 aa-1.42□□□□□ -2.64
SMAD1-203ENST00000502342 ABCA13Q86UQ4 5058 aa-1.42□□□□□ -2.64
SMAD1-203ENST00000502342 FOCADQ5VW36 1801 aa-1.43□□□□□ -2.64
SMAD1-203ENST00000502342 TOP2BQ02880 1626 aa-1.43□□□□□ -2.64
SMAD1-203ENST00000502342 UBE2L5PA0A1B0GUS4 154 aa-1.43□□□□□ -2.64
SMAD1-203ENST00000502342 UBE2L3P68036 154 aaKnown RBP-1.43□□□□□ -2.64
SMAD1-203ENST00000502342 Q0VG73 95 aa-1.43□□□□□ -2.64
SMAD1-203ENST00000502342 AKAP9Q99996 3911 aa-1.43□□□□□ -2.64
SMAD1-203ENST00000502342 DIP2CQ9Y2E4 1556 aa-1.43□□□□□ -2.64
SMAD1-203ENST00000502342 DNHD1Q96M86 4753 aa-1.44□□□□□ -2.64
SMAD1-203ENST00000502342 COL4A6Q14031 1691 aa-1.44□□□□□ -2.64
SMAD1-203ENST00000502342 OOSP1A8MZH6 123 aa-1.44□□□□□ -2.64
SMAD1-203ENST00000502342 FGF7P21781 194 aa-1.44□□□□□ -2.64
SMAD1-203ENST00000502342 SNCAP37840 140 aa-1.44□□□□□ -2.64
SMAD1-203ENST00000502342 ADAMTS12P58397 1594 aa-1.44□□□□□ -2.64
SMAD1-203ENST00000502342 PTPN23Q9H3S7 1636 aa-1.44□□□□□ -2.64
SMAD1-203ENST00000502342 TRAV30A0A087WSZ9 112 aa-1.45□□□□□ -2.64
SMAD1-203ENST00000502342 SAA2P0DJI9 122 aaPredicted RBP-1.45□□□□□ -2.64
SMAD1-203ENST00000502342 ATP5EP56381 51 aaPredicted RBP-1.45□□□□□ -2.64
SMAD1-203ENST00000502342 HEPN1Q6WQI6 88 aa-1.45□□□□□ -2.64
SMAD1-203ENST00000502342 C12orf57Q99622 126 aa-1.45□□□□□ -2.64
SMAD1-203ENST00000502342 VPS13DQ5THJ4 4388 aa-1.46□□□□□ -2.64
SMAD1-203ENST00000502342 EDC4Q6P2E9 1401 aaKnown RBP-1.46□□□□□ -2.64
SMAD1-203ENST00000502342 C6orf201Q7Z4U5 140 aa-1.46□□□□□ -2.64
SMAD1-203ENST00000502342 PRO1854Q9UHT4 67 aa-1.46□□□□□ -2.64
SMAD1-203ENST00000502342 TRANK1O15050 2925 aa-1.46□□□□□ -2.64
SMAD1-203ENST00000502342 PDCD11Q14690 1871 aaKnown RBP-1.47□□□□□ -2.64
SMAD1-203ENST00000502342 LOC105371267A0A1B0GV96 52 aa-1.47□□□□□ -2.64
SMAD1-203ENST00000502342 FAM24AA6NFZ4 105 aa-1.47□□□□□ -2.64
SMAD1-203ENST00000502342 AKAIN1P0CW23 69 aa-1.47□□□□□ -2.64
SMAD1-203ENST00000502342 MRPL34Q9BQ48 92 aaKnown RBP-1.47□□□□□ -2.64
SMAD1-203ENST00000502342 LINC00846Q9NV44 126 aa-1.47□□□□□ -2.64
SMAD1-203ENST00000502342 SCAPERQ9BY12 1400 aa-1.48□□□□□ -2.65
SMAD1-203ENST00000502342 A0A087WVE0 104 aa-1.48□□□□□ -2.65
SMAD1-203ENST00000502342 CCL22O00626 93 aa-1.48□□□□□ -2.65
SMAD1-203ENST00000502342 TNRC18O15417 2968 aaPredicted RBP-1.48□□□□□ -2.65
SMAD1-203ENST00000502342 CELSR3Q9NYQ7 3312 aa-1.48□□□□□ -2.65
SMAD1-203ENST00000502342 REV3LO60673 3130 aa-1.49□□□□□ -2.65
SMAD1-203ENST00000502342 LRRC37AA6NMS7 1700 aa-1.49□□□□□ -2.65
SMAD1-203ENST00000502342 A2ML1A8K2U0 1454 aa-1.49□□□□□ -2.65
SMAD1-203ENST00000502342 MRC2Q9UBG0 1479 aa-1.49□□□□□ -2.65
SMAD1-203ENST00000502342 NAP1L6A6NFF2 107 aa-1.49□□□□□ -2.65
SMAD1-203ENST00000502342 CCDC58Q4VC31 144 aa-1.49□□□□□ -2.65
SMAD1-203ENST00000502342 DPH3P1Q9H4G8 78 aa-1.49□□□□□ -2.65
SMAD1-203ENST00000502342 CUL7Q14999 1698 aa-1.5□□□□□ -2.65
SMAD1-203ENST00000502342 MT1AP04731 61 aa-1.5□□□□□ -2.65
SMAD1-203ENST00000502342 CDKN2A-AS1Q9UH64 79 aa-1.5□□□□□ -2.65
SMAD1-203ENST00000502342 COL14A1Q05707 1796 aaKnown RBP-1.5□□□□□ -2.65
SMAD1-203ENST00000502342 ANKRD11Q6UB99 2663 aaPredicted RBP-1.5□□□□□ -2.65
SMAD1-203ENST00000502342 TROQ12816 1431 aaPredicted RBP-1.5□□□□□ -2.65
SMAD1-203ENST00000502342 KIAA1551Q9HCM1 1747 aa-1.51□□□□□ -2.65
SMAD1-203ENST00000502342 PDE4DIPQ5VU43 2346 aa-1.51□□□□□ -2.65
Retrieved 100 of 20,778 RNA–protein pairs in 105.6 ms