RNA–Protein interactions for RNA: ENST00000498810.1

CDK11A-222, Transcript of cyclin dependent kinase 11A, human

TSL 2

Gene CDK11A, Length 574 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK11A-222	ENST00000498810		A0A0J9YXV3	536 aa		6.72	□□□□□ -1.33
CDK11A-222	ENST00000498810	KRTAP29-1	A8MX34	341 aa	Predicted RBP	6.72	□□□□□ -1.33
CDK11A-222	ENST00000498810	SNAPIN	O95295	136 aa		6.72	□□□□□ -1.33
CDK11A-222	ENST00000498810	OXT	P01178	125 aa		6.72	□□□□□ -1.33
CDK11A-222	ENST00000498810	NPS	P0C0P6	89 aa		6.72	□□□□□ -1.33
CDK11A-222	ENST00000498810	UBE2D1	P51668	147 aa		6.72	□□□□□ -1.33
CDK11A-222	ENST00000498810	KRTAP10-4	P60372	401 aa	Predicted RBP	6.72	□□□□□ -1.33
CDK11A-222	ENST00000498810	LINC00242	Q5T6M2	205 aa		6.72	□□□□□ -1.33
CDK11A-222	ENST00000498810	ZC2HC1B	Q5TFG8	222 aa		6.72	□□□□□ -1.33
CDK11A-222	ENST00000498810	MYCBP2	O75592	4640 aa		6.72	□□□□□ -1.33
CDK11A-222	ENST00000498810	LINC01549	A6NIU2	74 aa		6.71	□□□□□ -1.34
CDK11A-222	ENST00000498810	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	6.71	□□□□□ -1.34
CDK11A-222	ENST00000498810	CKS1B	P61024	79 aa		6.71	□□□□□ -1.34
CDK11A-222	ENST00000498810	HERVK_113	P63121	156 aa		6.71	□□□□□ -1.34
CDK11A-222	ENST00000498810	SVBP	Q8N300	66 aa		6.71	□□□□□ -1.34
CDK11A-222	ENST00000498810	FAM104A	Q969W3	186 aa		6.71	□□□□□ -1.34
CDK11A-222	ENST00000498810	TOMM6	Q96B49	74 aa		6.71	□□□□□ -1.34
CDK11A-222	ENST00000498810	TIMM17A	Q99595	171 aa		6.71	□□□□□ -1.34
CDK11A-222	ENST00000498810	MRPL35	Q9NZE8	188 aa	Known RBP	6.71	□□□□□ -1.34
CDK11A-222	ENST00000498810	PRR3	P79522	188 aa	Known RBP	6.7	□□□□□ -1.34
CDK11A-222	ENST00000498810	LINC00469	Q8N7U9	141 aa		6.7	□□□□□ -1.34
CDK11A-222	ENST00000498810	AMELX	Q99217	191 aa		6.7	□□□□□ -1.34
CDK11A-222	ENST00000498810	ALKBH7	Q9BT30	221 aa	Predicted RBP	6.7	□□□□□ -1.34
CDK11A-222	ENST00000498810	TRAPPC1	Q9Y5R8	145 aa		6.7	□□□□□ -1.34
CDK11A-222	ENST00000498810	IGIP	A6NJ69	53 aa		6.69	□□□□□ -1.34
CDK11A-222	ENST00000498810	HNRNPA3	P51991	378 aa	Known RBP	6.69	□□□□□ -1.34
CDK11A-222	ENST00000498810	GAGE2E	Q4V326	116 aa		6.69	□□□□□ -1.34
CDK11A-222	ENST00000498810	C9orf116	Q5BN46	136 aa	Predicted RBP	6.69	□□□□□ -1.34
CDK11A-222	ENST00000498810	C6orf226	Q5I0X4	101 aa		6.69	□□□□□ -1.34
CDK11A-222	ENST00000498810	C10orf91	Q5T1B1	145 aa		6.69	□□□□□ -1.34
CDK11A-222	ENST00000498810	UNQ6190/PRO20217	Q6UXQ8	127 aa		6.69	□□□□□ -1.34
CDK11A-222	ENST00000498810		Q6ZRP5	223 aa		6.69	□□□□□ -1.34
CDK11A-222	ENST00000498810	LINC00173	Q6ZV60	143 aa		6.69	□□□□□ -1.34
CDK11A-222	ENST00000498810	ERAS	Q7Z444	233 aa		6.69	□□□□□ -1.34
CDK11A-222	ENST00000498810	GAGE2D	Q9UEU5	116 aa		6.69	□□□□□ -1.34
CDK11A-222	ENST00000498810	TRBV30	A0A0K0K1B3	111 aa		6.68	□□□□□ -1.34
CDK11A-222	ENST00000498810	C2orf82	Q6UX34	121 aa		6.68	□□□□□ -1.34
CDK11A-222	ENST00000498810	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	6.68	□□□□□ -1.34
CDK11A-222	ENST00000498810	LINC01561	Q8N1V8	128 aa		6.68	□□□□□ -1.34
CDK11A-222	ENST00000498810	HERC1	Q15751	4861 aa		6.68	□□□□□ -1.34
CDK11A-222	ENST00000498810	PKHD1L1	Q86WI1	4243 aa		6.68	□□□□□ -1.34
CDK11A-222	ENST00000498810	NDUFA6	P56556	154 aa		6.67	□□□□□ -1.34
CDK11A-222	ENST00000498810	C10orf25	Q5T742	122 aa		6.67	□□□□□ -1.34
CDK11A-222	ENST00000498810	C6orf48	Q9UBA6	75 aa		6.67	□□□□□ -1.34
CDK11A-222	ENST00000498810	UBE2B	P63146	152 aa		6.66	□□□□□ -1.34
CDK11A-222	ENST00000498810		Q8IZM0	81 aa		6.66	□□□□□ -1.34
CDK11A-222	ENST00000498810	CDKN2A-AS1	Q9UH64	79 aa		6.66	□□□□□ -1.34
CDK11A-222	ENST00000498810		A0A1W2PNN7	141 aa		6.65	□□□□□ -1.34
CDK11A-222	ENST00000498810	NDUFC2-KCTD14	E9PQ53	114 aa		6.65	□□□□□ -1.34
CDK11A-222	ENST00000498810		H3BRM9	83 aa		6.65	□□□□□ -1.34
CDK11A-222	ENST00000498810	CXCL5	P42830	114 aa		6.65	□□□□□ -1.34
CDK11A-222	ENST00000498810	RAB5B	P61020	215 aa		6.65	□□□□□ -1.34
CDK11A-222	ENST00000498810	PMVK	Q15126	192 aa		6.65	□□□□□ -1.34
CDK11A-222	ENST00000498810	REG3G	Q6UW15	175 aa		6.65	□□□□□ -1.34
CDK11A-222	ENST00000498810	TINCR	A0A1B0GVN0	87 aa		6.64	□□□□□ -1.35
CDK11A-222	ENST00000498810		M0QXV9	152 aa		6.64	□□□□□ -1.35
CDK11A-222	ENST00000498810	HBD	P02042	147 aa		6.64	□□□□□ -1.35
CDK11A-222	ENST00000498810	TLX1NB	P0CAT3	122 aa		6.64	□□□□□ -1.35
CDK11A-222	ENST00000498810	KIAA0087	Q14695	138 aa		6.64	□□□□□ -1.35
CDK11A-222	ENST00000498810	PHF5A	Q7RTV0	110 aa	Known RBP	6.64	□□□□□ -1.35
CDK11A-222	ENST00000498810	FAM19A3	Q7Z5A8	133 aa		6.64	□□□□□ -1.35
CDK11A-222	ENST00000498810		F8VRH5	84 aa		6.63	□□□□□ -1.35
CDK11A-222	ENST00000498810	C1orf137	Q5JT78	98 aa		6.63	□□□□□ -1.35
CDK11A-222	ENST00000498810	SERTAD4-AS1	Q5TG53	156 aa		6.63	□□□□□ -1.35
CDK11A-222	ENST00000498810	C18orf32	Q8TCD1	76 aa		6.63	□□□□□ -1.35
CDK11A-222	ENST00000498810	FAM168B	A1KXE4	195 aa		6.62	□□□□□ -1.35
CDK11A-222	ENST00000498810	LINC01546	A6NGU7	62 aa		6.62	□□□□□ -1.35
CDK11A-222	ENST00000498810	SPINK8	P0C7L1	97 aa		6.62	□□□□□ -1.35
CDK11A-222	ENST00000498810	LINC00614	P0C842	121 aa		6.62	□□□□□ -1.35
CDK11A-222	ENST00000498810	PMCHL1	Q16048	86 aa		6.62	□□□□□ -1.35
CDK11A-222	ENST00000498810	PDZD11	Q5EBL8	140 aa		6.62	□□□□□ -1.35
CDK11A-222	ENST00000498810	SPINK6	Q6UWN8	80 aa		6.62	□□□□□ -1.35
CDK11A-222	ENST00000498810	COX7B2	Q8TF08	81 aa		6.62	□□□□□ -1.35
CDK11A-222	ENST00000498810	CST9L	Q9H4G1	147 aa		6.62	□□□□□ -1.35
CDK11A-222	ENST00000498810	SMIM1	B2RUZ4	78 aa		6.61	□□□□□ -1.35
CDK11A-222	ENST00000498810	ATP5L	O75964	103 aa		6.61	□□□□□ -1.35
CDK11A-222	ENST00000498810	PSORS1C2	Q9UIG4	136 aa		6.61	□□□□□ -1.35
CDK11A-222	ENST00000498810	FAT3	Q8TDW7	4589 aa		6.61	□□□□□ -1.35
CDK11A-222	ENST00000498810	LRP1	Q07954	4544 aa	Known RBP	6.6	□□□□□ -1.35
CDK11A-222	ENST00000498810	XAGE1A	Q9HD64	81 aa		6.59	□□□□□ -1.35
CDK11A-222	ENST00000498810	IGLV5-45	A0A087WSX0	123 aa		6.58	□□□□□ -1.36
CDK11A-222	ENST00000498810	IGLC3	P0DOY3	106 aa		6.58	□□□□□ -1.36
CDK11A-222	ENST00000498810	C9orf129	Q5T035	196 aa	Known RBP	6.58	□□□□□ -1.36
CDK11A-222	ENST00000498810	TMEM170B	Q5T4T1	132 aa		6.58	□□□□□ -1.36
CDK11A-222	ENST00000498810	BAGE3	Q86Y29	109 aa		6.58	□□□□□ -1.36
CDK11A-222	ENST00000498810	CBLN2	Q8IUK8	224 aa		6.58	□□□□□ -1.36
CDK11A-222	ENST00000498810	HSBP1	O75506	76 aa		6.57	□□□□□ -1.36
CDK11A-222	ENST00000498810	LBH	Q53QV2	105 aa	Predicted RBP	6.57	□□□□□ -1.36
CDK11A-222	ENST00000498810		A0A096LNJ9	63 aa		6.56	□□□□□ -1.36
CDK11A-222	ENST00000498810	IGLV7-43	P04211	117 aa		6.56	□□□□□ -1.36
CDK11A-222	ENST00000498810	ZNF22	P17026	224 aa	Predicted RBP	6.56	□□□□□ -1.36
CDK11A-222	ENST00000498810	NKAPP1	Q8N9T2	125 aa		6.56	□□□□□ -1.36
CDK11A-222	ENST00000498810	DIRC1	Q969H9	104 aa		6.56	□□□□□ -1.36
CDK11A-222	ENST00000498810	CHCHD1	Q96BP2	118 aa	Known RBP	6.56	□□□□□ -1.36
CDK11A-222	ENST00000498810	URB1-AS1	Q96HZ7	61 aa		6.56	□□□□□ -1.36
CDK11A-222	ENST00000498810	CHTOP	Q9Y3Y2	248 aa	Known RBP	6.56	□□□□□ -1.36
CDK11A-222	ENST00000498810		H0Y8G0	127 aa		6.55	□□□□□ -1.36
CDK11A-222	ENST00000498810	PFN2	P35080	140 aa		6.55	□□□□□ -1.36
CDK11A-222	ENST00000498810	LINC01600	Q96MT4	127 aa		6.55	□□□□□ -1.36
CDK11A-222	ENST00000498810	IFI27L1	Q96BM0	104 aa		6.54	□□□□□ -1.36

Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms