RNA–Protein interactions for RNA: ENST00000498756.5

GPATCH4-210, Transcript of G-patch domain containing 4, humanhuman

TSL 2

Gene GPATCH4, Length 634 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-210ENST00000498756 C9orf116Q5BN46 136 aaPredicted RBP6.98□□□□□ -1.29
GPATCH4-210ENST00000498756 C6orf226Q5I0X4 101 aa6.98□□□□□ -1.29
GPATCH4-210ENST00000498756 Q8IZM0 81 aa6.98□□□□□ -1.29
GPATCH4-210ENST00000498756 TTTY13Q9BZ97 58 aa6.98□□□□□ -1.29
GPATCH4-210ENST00000498756 LEPROTO15243 131 aa6.97□□□□□ -1.29
GPATCH4-210ENST00000498756 CNBPP62633 177 aaKnown RBP6.97□□□□□ -1.29
GPATCH4-210ENST00000498756 SYCNQ0VAF6 134 aa6.97□□□□□ -1.29
GPATCH4-210ENST00000498756 C14orf177Q52M58 125 aa6.97□□□□□ -1.29
GPATCH4-210ENST00000498756 C2orf48Q96LS8 159 aa6.97□□□□□ -1.29
GPATCH4-210ENST00000498756 CAMK2N2Q96S95 79 aa6.97□□□□□ -1.29
GPATCH4-210ENST00000498756 C6orf48Q9UBA6 75 aa6.97□□□□□ -1.29
GPATCH4-210ENST00000498756 PKHD1P08F94 4074 aa6.96□□□□□ -1.29
GPATCH4-210ENST00000498756 C16orf90A8MZG2 172 aa6.96□□□□□ -1.3
GPATCH4-210ENST00000498756 E9PLD3 99 aa6.96□□□□□ -1.3
GPATCH4-210ENST00000498756 EREGO14944 169 aa6.96□□□□□ -1.3
GPATCH4-210ENST00000498756 AKR1D1P51857 326 aa6.96□□□□□ -1.3
GPATCH4-210ENST00000498756 C9orf163Q8N9P6 203 aa6.96□□□□□ -1.3
GPATCH4-210ENST00000498756 IGLV5-52A0A0A0MRZ9 124 aa6.95□□□□□ -1.3
GPATCH4-210ENST00000498756 J3QQQ9 107 aa6.95□□□□□ -1.3
GPATCH4-210ENST00000498756 PRSS2P07478 247 aa6.95□□□□□ -1.3
GPATCH4-210ENST00000498756 KRTAP10-1P60331 282 aa6.95□□□□□ -1.3
GPATCH4-210ENST00000498756 ZNF625Q96I27 306 aaPredicted RBP6.95□□□□□ -1.3
GPATCH4-210ENST00000498756 PGPEP1Q9NXJ5 209 aa6.95□□□□□ -1.3
GPATCH4-210ENST00000498756 PANO1I0J062 215 aa6.94□□□□□ -1.3
GPATCH4-210ENST00000498756 NDUFA1O15239 70 aa6.94□□□□□ -1.3
GPATCH4-210ENST00000498756 CKS1BP61024 79 aa6.94□□□□□ -1.3
GPATCH4-210ENST00000498756 SDIM1Q6ZPB5 146 aa6.94□□□□□ -1.3
GPATCH4-210ENST00000498756 CARD19Q96LW7 228 aa6.94□□□□□ -1.3
GPATCH4-210ENST00000498756 HERVK_113P61574 105 aa6.93□□□□□ -1.3
GPATCH4-210ENST00000498756 PCP2Q8IVA1 136 aa6.93□□□□□ -1.3
GPATCH4-210ENST00000498756 PLEKHB2Q96CS7 222 aa6.93□□□□□ -1.3
GPATCH4-210ENST00000498756 FAM30AQ9NZY2 134 aa6.93□□□□□ -1.3
GPATCH4-210ENST00000498756 TP73-AS1Q9UF72 201 aa6.93□□□□□ -1.3
GPATCH4-210ENST00000498756 NDUFA12Q9UI09 145 aa6.93□□□□□ -1.3
GPATCH4-210ENST00000498756 GCSHP23434 173 aa6.92□□□□□ -1.3
GPATCH4-210ENST00000498756 APOBP04114 4563 aaKnown RBP6.91□□□□□ -1.3
GPATCH4-210ENST00000498756 F8WDY8 70 aa6.91□□□□□ -1.3
GPATCH4-210ENST00000498756 CHTF8P0CG12 524 aa6.91□□□□□ -1.3
GPATCH4-210ENST00000498756 NMUP48645 174 aa6.91□□□□□ -1.3
GPATCH4-210ENST00000498756 RNF151Q2KHN1 245 aa6.91□□□□□ -1.3
GPATCH4-210ENST00000498756 A0A096LNI7 61 aa6.9□□□□□ -1.3
GPATCH4-210ENST00000498756 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.9□□□□□ -1.3
GPATCH4-210ENST00000498756 TRBV30A0A0K0K1B3 111 aa6.9□□□□□ -1.3
GPATCH4-210ENST00000498756 A0A0U1RRA0 63 aa6.9□□□□□ -1.3
GPATCH4-210ENST00000498756 LGALS3P17931 250 aaKnown RBP6.9□□□□□ -1.3
GPATCH4-210ENST00000498756 CXCL5P42830 114 aa6.9□□□□□ -1.3
GPATCH4-210ENST00000498756 Q6ZRP5 223 aa6.9□□□□□ -1.3
GPATCH4-210ENST00000498756 KRTAP17-1Q9BYP8 105 aa6.9□□□□□ -1.3
GPATCH4-210ENST00000498756 PAM16Q9Y3D7 125 aa6.9□□□□□ -1.3
GPATCH4-210ENST00000498756 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.9□□□□□ -1.3
GPATCH4-210ENST00000498756 A0A0J9YXY3 114 aa6.89□□□□□ -1.31
GPATCH4-210ENST00000498756 SMIM13P0DJ93 91 aa6.89□□□□□ -1.31
GPATCH4-210ENST00000498756 PFN2P35080 140 aa6.89□□□□□ -1.31
GPATCH4-210ENST00000498756 MYMXA0A1B0GTQ4 84 aa6.88□□□□□ -1.31
GPATCH4-210ENST00000498756 CDK2AP2O75956 126 aa6.88□□□□□ -1.31
GPATCH4-210ENST00000498756 TLX1NBP0CAT3 122 aa6.88□□□□□ -1.31
GPATCH4-210ENST00000498756 HAMPP81172 84 aa6.88□□□□□ -1.31
GPATCH4-210ENST00000498756 GAGE2BQ13066 116 aa6.88□□□□□ -1.31
GPATCH4-210ENST00000498756 SPATA45Q537H7 98 aa6.88□□□□□ -1.31
GPATCH4-210ENST00000498756 ADAMTSL4-AS1Q5T5F5 129 aa6.88□□□□□ -1.31
GPATCH4-210ENST00000498756 C14orf144Q96I85 54 aa6.88□□□□□ -1.31
GPATCH4-210ENST00000498756 ERG28Q9UKR5 140 aa6.88□□□□□ -1.31
GPATCH4-210ENST00000498756 KIAA1109Q2LD37 5005 aa6.88□□□□□ -1.31
GPATCH4-210ENST00000498756 IGKV2-24A0A0C4DH68 120 aa6.87□□□□□ -1.31
GPATCH4-210ENST00000498756 LOC107984640A0A0U1RRK4 108 aa6.87□□□□□ -1.31
GPATCH4-210ENST00000498756 ZNF815PA8K554 130 aa6.87□□□□□ -1.31
GPATCH4-210ENST00000498756 HSBP1L1C9JCN9 74 aa6.87□□□□□ -1.31
GPATCH4-210ENST00000498756 GAGE2EQ4V326 116 aa6.87□□□□□ -1.31
GPATCH4-210ENST00000498756 C9orf129Q5T035 196 aaKnown RBP6.87□□□□□ -1.31
GPATCH4-210ENST00000498756 KRTAP7-1Q8IUC3 87 aa6.87□□□□□ -1.31
GPATCH4-210ENST00000498756 LITAFQ99732 161 aa6.87□□□□□ -1.31
GPATCH4-210ENST00000498756 VAMP8Q9BV40 100 aa6.87□□□□□ -1.31
GPATCH4-210ENST00000498756 GAGE2DQ9UEU5 116 aa6.87□□□□□ -1.31
GPATCH4-210ENST00000498756 NDUFC2-KCTD14E9PQ53 114 aa6.86□□□□□ -1.31
GPATCH4-210ENST00000498756 EIF4EBP3O60516 100 aaPredicted RBP6.86□□□□□ -1.31
GPATCH4-210ENST00000498756 PTTG1IPP53801 180 aa6.86□□□□□ -1.31
GPATCH4-210ENST00000498756 HERV-K104P63124 156 aa6.86□□□□□ -1.31
GPATCH4-210ENST00000498756 RPL18AQ02543 176 aaKnown RBP6.86□□□□□ -1.31
GPATCH4-210ENST00000498756 DAND5Q8N907 189 aa6.86□□□□□ -1.31
GPATCH4-210ENST00000498756 XAGE1AQ9HD64 81 aa6.86□□□□□ -1.31
GPATCH4-210ENST00000498756 A0A1W2PNN7 141 aa6.85□□□□□ -1.31
GPATCH4-210ENST00000498756 FAM168BA1KXE4 195 aa6.85□□□□□ -1.31
GPATCH4-210ENST00000498756 COX8AP10176 69 aa6.85□□□□□ -1.31
GPATCH4-210ENST00000498756 LINC00158P58513 81 aa6.85□□□□□ -1.31
GPATCH4-210ENST00000498756 MEIG1Q5JSS6 88 aa6.85□□□□□ -1.31
GPATCH4-210ENST00000498756 Q6ZSA8 131 aa6.85□□□□□ -1.31
GPATCH4-210ENST00000498756 BOD1L2Q8IYS8 172 aa6.85□□□□□ -1.31
GPATCH4-210ENST00000498756 Q8NDZ9 215 aa6.85□□□□□ -1.31
GPATCH4-210ENST00000498756 KRTAP4-5Q9BYR2 181 aa6.85□□□□□ -1.31
GPATCH4-210ENST00000498756 XGP55808 180 aa6.84□□□□□ -1.31
GPATCH4-210ENST00000498756 CIRBPQ14011 172 aaKnown RBP6.84□□□□□ -1.31
GPATCH4-210ENST00000498756 MIR7-3HGQ8N6C7 128 aa6.84□□□□□ -1.31
GPATCH4-210ENST00000498756 SND1-IT1Q9HBX3 110 aa6.84□□□□□ -1.31
GPATCH4-210ENST00000498756 HERC2O95714 4834 aa6.83□□□□□ -1.32
GPATCH4-210ENST00000498756 SFTA2Q6UW10 78 aa6.83□□□□□ -1.32
GPATCH4-210ENST00000498756 SOSTDC1Q6X4U4 206 aa6.83□□□□□ -1.32
GPATCH4-210ENST00000498756 SPACA4Q8TDM5 124 aa6.83□□□□□ -1.32
GPATCH4-210ENST00000498756 RYR1P21817 5038 aa6.82□□□□□ -1.32
GPATCH4-210ENST00000498756 A0A087WYN8 130 aa6.82□□□□□ -1.32
GPATCH4-210ENST00000498756 SMIM6P0DI80 62 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms