RNA–Protein interactions for RNA: ENST00000498653.5

FXN-205, Transcript of frataxin, humanhuman

TSL 1 (best) BASIC

Gene FXN, Length 856 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-205ENST00000498653 A0A096LNJ9 63 aa3.32□□□□□ -1.88
FXN-205ENST00000498653 IGIPA6NJ69 53 aa3.32□□□□□ -1.88
FXN-205ENST00000498653 LEPROTL1O95214 131 aa3.32□□□□□ -1.88
FXN-205ENST00000498653 CRPP02741 224 aa3.32□□□□□ -1.88
FXN-205ENST00000498653 FABP4P15090 132 aa3.32□□□□□ -1.88
FXN-205ENST00000498653 S100A2P29034 98 aa3.32□□□□□ -1.88
FXN-205ENST00000498653 SNRPEP62304 92 aaKnown RBP3.32□□□□□ -1.88
FXN-205ENST00000498653 MRPS36P82909 103 aaKnown RBP3.32□□□□□ -1.88
FXN-205ENST00000498653 TEX43Q6ZNM6 134 aa3.32□□□□□ -1.88
FXN-205ENST00000498653 Q6ZUT4 128 aa3.32□□□□□ -1.88
FXN-205ENST00000498653 LINC00269Q8N2A0 174 aa3.32□□□□□ -1.88
FXN-205ENST00000498653 PACRGQ96M98 296 aaPredicted RBP3.32□□□□□ -1.88
FXN-205ENST00000498653 OPRPNQ99935 248 aaPredicted RBP3.32□□□□□ -1.88
FXN-205ENST00000498653 VCX2Q9H322 139 aa3.32□□□□□ -1.88
FXN-205ENST00000498653 CDC42SE2Q9NRR3 84 aa3.32□□□□□ -1.88
FXN-205ENST00000498653 HSPB8Q9UJY1 196 aa3.32□□□□□ -1.88
FXN-205ENST00000498653 TRAV8-3A0A0A6YYJ7 113 aa3.31□□□□□ -1.88
FXN-205ENST00000498653 IGKV3OR2-268A0A0C4DH90 116 aa3.31□□□□□ -1.88
FXN-205ENST00000498653 C5orf52A6NGY3 159 aa3.31□□□□□ -1.88
FXN-205ENST00000498653 IFITM10A6NMD0 228 aa3.31□□□□□ -1.88
FXN-205ENST00000498653 IBA57-AS1B1ANH7 110 aa3.31□□□□□ -1.88
FXN-205ENST00000498653 PRSS1P07477 247 aa3.31□□□□□ -1.88
FXN-205ENST00000498653 REG3AQ06141 175 aa3.31□□□□□ -1.88
FXN-205ENST00000498653 PMVKQ15126 192 aa3.31□□□□□ -1.88
FXN-205ENST00000498653 SS18Q15532 418 aa3.31□□□□□ -1.88
FXN-205ENST00000498653 RNASE13Q5GAN3 156 aaKnown RBP3.31□□□□□ -1.88
FXN-205ENST00000498653 CLPSL2Q6UWE3 100 aa3.31□□□□□ -1.88
FXN-205ENST00000498653 LINC00173Q6ZV60 143 aa3.31□□□□□ -1.88
FXN-205ENST00000498653 HIST3H2BBQ8N257 126 aa3.31□□□□□ -1.88
FXN-205ENST00000498653 UBE2WQ96B02 151 aa3.31□□□□□ -1.88
FXN-205ENST00000498653 IFI27L1Q96BM0 104 aa3.31□□□□□ -1.88
FXN-205ENST00000498653 RMI2Q96E14 147 aa3.31□□□□□ -1.88
FXN-205ENST00000498653 C2orf88Q9BSF0 95 aa3.31□□□□□ -1.88
FXN-205ENST00000498653 TRAV13-1A0A0B4J241 112 aa3.3□□□□□ -1.88
FXN-205ENST00000498653 TRAV8-4A0A0B4J246 113 aa3.3□□□□□ -1.88
FXN-205ENST00000498653 IGLV5-39A0A0G2JS06 123 aa3.3□□□□□ -1.88
FXN-205ENST00000498653 LINC00959A0A1B0GUT2 108 aa3.3□□□□□ -1.88
FXN-205ENST00000498653 LRCOL1A6NCL2 159 aa3.3□□□□□ -1.88
FXN-205ENST00000498653 CCL25O15444 150 aa3.3□□□□□ -1.88
FXN-205ENST00000498653 IGKV2-30P06310 120 aa3.3□□□□□ -1.88
FXN-205ENST00000498653 CFC1BP0CG36 223 aa3.3□□□□□ -1.88
FXN-205ENST00000498653 MIAQ16674 131 aa3.3□□□□□ -1.88
FXN-205ENST00000498653 ENHOQ6UWT2 76 aa3.3□□□□□ -1.88
FXN-205ENST00000498653 BAALCQ8WXS3 180 aa3.3□□□□□ -1.88
FXN-205ENST00000498653 FAM104AQ969W3 186 aa3.3□□□□□ -1.88
FXN-205ENST00000498653 AMELXQ99217 191 aa3.3□□□□□ -1.88
FXN-205ENST00000498653 MAP1LC3CQ9BXW4 147 aa3.3□□□□□ -1.88
FXN-205ENST00000498653 CST9LQ9H4G1 147 aa3.3□□□□□ -1.88
FXN-205ENST00000498653 Q9HAA7 133 aa3.3□□□□□ -1.88
FXN-205ENST00000498653 PRR34Q9NV39 138 aa3.3□□□□□ -1.88
FXN-205ENST00000498653 IGKV2D-24A0A075B6R9 120 aa3.29□□□□□ -1.88
FXN-205ENST00000498653 TRAV12-1A0A0B4J245 112 aa3.29□□□□□ -1.88
FXN-205ENST00000498653 H0Y8G0 127 aa3.29□□□□□ -1.88
FXN-205ENST00000498653 UBE2D1P51668 147 aa3.29□□□□□ -1.88
FXN-205ENST00000498653 KRTDAPP60985 99 aa3.29□□□□□ -1.88
FXN-205ENST00000498653 SEC11AP67812 179 aa3.29□□□□□ -1.88
FXN-205ENST00000498653 ZC2HC1BQ5TFG8 222 aa3.29□□□□□ -1.88
FXN-205ENST00000498653 NFE4Q86UQ8 179 aa3.29□□□□□ -1.88
FXN-205ENST00000498653 Q8N814 137 aa3.29□□□□□ -1.88
FXN-205ENST00000498653 CHCHD10Q8WYQ3 142 aaPredicted RBP3.29□□□□□ -1.88
FXN-205ENST00000498653 HIST1H2BLQ99880 126 aa3.29□□□□□ -1.88
FXN-205ENST00000498653 CHTOPQ9Y3Y2 248 aaKnown RBP3.29□□□□□ -1.88
FXN-205ENST00000498653 IGLV10-54A0A075B6I4 117 aa3.28□□□□□ -1.88
FXN-205ENST00000498653 C20orf202A1L168 122 aa3.28□□□□□ -1.88
FXN-205ENST00000498653 SYS1-DBNDD2H3BUS1 97 aa3.28□□□□□ -1.88
FXN-205ENST00000498653 PSCAO43653 123 aa3.28□□□□□ -1.88
FXN-205ENST00000498653 C3orf79P0CE67 100 aa3.28□□□□□ -1.88
FXN-205ENST00000498653 XCL1P47992 114 aa3.28□□□□□ -1.88
FXN-205ENST00000498653 MT1HP80294 61 aa3.28□□□□□ -1.88
FXN-205ENST00000498653 LINC00242Q5T6M2 205 aa3.28□□□□□ -1.88
FXN-205ENST00000498653 CD164L2Q6UWJ8 174 aa3.28□□□□□ -1.88
FXN-205ENST00000498653 PET117Q6UWS5 81 aa3.28□□□□□ -1.88
FXN-205ENST00000498653 GEMIN7Q9H840 131 aaKnown RBP3.28□□□□□ -1.88
FXN-205ENST00000498653 MDN1Q9NU22 5596 aa3.27□□□□□ -1.89
FXN-205ENST00000498653 TINCRA0A1B0GVN0 87 aa3.27□□□□□ -1.89
FXN-205ENST00000498653 F8VRH5 84 aa3.27□□□□□ -1.89
FXN-205ENST00000498653 COX7A2LO14548 114 aa3.27□□□□□ -1.89
FXN-205ENST00000498653 DPM2O94777 84 aa3.27□□□□□ -1.89
FXN-205ENST00000498653 IGLC3P0DOY3 106 aa3.27□□□□□ -1.89
FXN-205ENST00000498653 PLNP26678 52 aa3.27□□□□□ -1.89
FXN-205ENST00000498653 AKR1D1P51857 326 aa3.27□□□□□ -1.89
FXN-205ENST00000498653 HERVK_113P63121 156 aa3.27□□□□□ -1.89
FXN-205ENST00000498653 LINC01620Q4KN68 170 aa3.27□□□□□ -1.89
FXN-205ENST00000498653 FAM19A3Q7Z5A8 133 aa3.27□□□□□ -1.89
FXN-205ENST00000498653 LINC00469Q8N7U9 141 aa3.27□□□□□ -1.89
FXN-205ENST00000498653 OR10D4PQ8NGN7 298 aa3.27□□□□□ -1.89
FXN-205ENST00000498653 MRPL35Q9NZE8 188 aaKnown RBP3.27□□□□□ -1.89
FXN-205ENST00000498653 IGLV4-69A0A075B6H9 119 aa3.26□□□□□ -1.89
FXN-205ENST00000498653 C11orf86A6NJI1 115 aa3.26□□□□□ -1.89
FXN-205ENST00000498653 H3BRM9 83 aa3.26□□□□□ -1.89
FXN-205ENST00000498653 APOMO95445 188 aa3.26□□□□□ -1.89
FXN-205ENST00000498653 IGKCP01834 107 aa3.26□□□□□ -1.89
FXN-205ENST00000498653 KRTAP2-3P0C7H8 128 aa3.26□□□□□ -1.89
FXN-205ENST00000498653 COX6A2Q02221 97 aa3.26□□□□□ -1.89
FXN-205ENST00000498653 TMEM170BQ5T4T1 132 aa3.26□□□□□ -1.89
FXN-205ENST00000498653 LINC01545Q5VT33 79 aa3.26□□□□□ -1.89
FXN-205ENST00000498653 CFAP161Q6P656 301 aa3.26□□□□□ -1.89
FXN-205ENST00000498653 KRTAP26-1Q6PEX3 210 aa3.26□□□□□ -1.89
FXN-205ENST00000498653 C5orf38Q86SI9 138 aa3.26□□□□□ -1.89
FXN-205ENST00000498653 LINC01561Q8N1V8 128 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms