RNA–Protein interactions for RNA: ENST00000498466.1

CCDC58-207, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 683 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-207ENST00000498466 FAM74A3Q4VXF1 159 aa8.07□□□□□ -1.12
CCDC58-207ENST00000498466 Q6ZN92 141 aa8.07□□□□□ -1.12
CCDC58-207ENST00000498466 C2orf88Q9BSF0 95 aa8.07□□□□□ -1.12
CCDC58-207ENST00000498466 A0A1B0GW15 77 aa8.06□□□□□ -1.12
CCDC58-207ENST00000498466 ALKAL2Q6UX46 152 aa8.06□□□□□ -1.12
CCDC58-207ENST00000498466 ALKBH7Q9BT30 221 aaPredicted RBP8.06□□□□□ -1.12
CCDC58-207ENST00000498466 F8W036 122 aa8.05□□□□□ -1.12
CCDC58-207ENST00000498466 UBE2AP49459 152 aa8.05□□□□□ -1.12
CCDC58-207ENST00000498466 FAM229BQ4G0N7 80 aa8.05□□□□□ -1.12
CCDC58-207ENST00000498466 Q8IZM0 81 aa8.05□□□□□ -1.12
CCDC58-207ENST00000498466 LINC00167Q96N53 147 aa8.05□□□□□ -1.12
CCDC58-207ENST00000498466 IGKV2D-26A0A0A0MRZ7 120 aa8.04□□□□□ -1.12
CCDC58-207ENST00000498466 SMIM27A0A1W2PRY6 76 aa8.04□□□□□ -1.12
CCDC58-207ENST00000498466 GAGE10A6NGK3 116 aa8.04□□□□□ -1.12
CCDC58-207ENST00000498466 ZC2HC1BQ5TFG8 222 aa8.04□□□□□ -1.12
CCDC58-207ENST00000498466 PPDPFQ9H3Y8 114 aa8.04□□□□□ -1.12
CCDC58-207ENST00000498466 F8VRH5 84 aa8.03□□□□□ -1.12
CCDC58-207ENST00000498466 PPBPP02775 128 aa8.03□□□□□ -1.12
CCDC58-207ENST00000498466 S100A8P05109 93 aa8.03□□□□□ -1.12
CCDC58-207ENST00000498466 SRP19P09132 144 aaKnown RBP8.03□□□□□ -1.12
CCDC58-207ENST00000498466 LINC01547P58512 204 aaPredicted RBP8.03□□□□□ -1.12
CCDC58-207ENST00000498466 MRPL54Q6P161 138 aaKnown RBP8.03□□□□□ -1.12
CCDC58-207ENST00000498466 TCTE3Q8IZS6 198 aa8.03□□□□□ -1.12
CCDC58-207ENST00000498466 RPL23P62829 140 aaKnown RBP8.02□□□□□ -1.13
CCDC58-207ENST00000498466 ADIRFQ15847 76 aa8.02□□□□□ -1.13
CCDC58-207ENST00000498466 ORMDL3Q8N138 153 aa8.02□□□□□ -1.13
CCDC58-207ENST00000498466 VCX2Q9H322 139 aa8.02□□□□□ -1.13
CCDC58-207ENST00000498466 CRCT1Q9UGL9 99 aa8.02□□□□□ -1.13
CCDC58-207ENST00000498466 KRTAP13-1Q8IUC0 172 aa8.01□□□□□ -1.13
CCDC58-207ENST00000498466 CTAG1AP78358 180 aa8□□□□□ -1.13
CCDC58-207ENST00000498466 TMEM136Q6ZRR5 245 aa8□□□□□ -1.13
CCDC58-207ENST00000498466 PRELID3AQ96N28 172 aa8□□□□□ -1.13
CCDC58-207ENST00000498466 AMELXQ99217 191 aa8□□□□□ -1.13
CCDC58-207ENST00000498466 LOC389332A0A1B0GUA5 103 aa7.99□□□□□ -1.13
CCDC58-207ENST00000498466 PNRC1Q12796 327 aaPredicted RBP7.99□□□□□ -1.13
CCDC58-207ENST00000498466 CYSLTR1Q9Y271 337 aa7.99□□□□□ -1.13
CCDC58-207ENST00000498466 A0A1B0GXF2 115 aa7.98□□□□□ -1.13
CCDC58-207ENST00000498466 CXCL5P42830 114 aa7.98□□□□□ -1.13
CCDC58-207ENST00000498466 C2orf66Q6UXQ4 117 aa7.98□□□□□ -1.13
CCDC58-207ENST00000498466 NKAPP1Q8N9T2 125 aa7.98□□□□□ -1.13
CCDC58-207ENST00000498466 CDKN2A-AS1Q9UH64 79 aa7.98□□□□□ -1.13
CCDC58-207ENST00000498466 HERVK_113P63121 156 aa7.97□□□□□ -1.13
CCDC58-207ENST00000498466 FAM19A3Q7Z5A8 133 aa7.97□□□□□ -1.13
CCDC58-207ENST00000498466 LINC00337Q8N6G1 96 aa7.97□□□□□ -1.13
CCDC58-207ENST00000498466 KRTAP9-9Q9BYP9 154 aa7.97□□□□□ -1.13
CCDC58-207ENST00000498466 KRTAP9-4Q9BYQ2 154 aa7.97□□□□□ -1.13
CCDC58-207ENST00000498466 NAT8Q9UHE5 227 aa7.97□□□□□ -1.13
CCDC58-207ENST00000498466 IGKV2-28A0A075B6P5 120 aa7.96□□□□□ -1.14
CCDC58-207ENST00000498466 IGKV2D-28P01615 120 aa7.96□□□□□ -1.14
CCDC58-207ENST00000498466 SEC11AP67812 179 aa7.96□□□□□ -1.14
CCDC58-207ENST00000498466 MAP1LC3AQ9H492 121 aa7.96□□□□□ -1.14
CCDC58-207ENST00000498466 GEMIN7Q9H840 131 aaKnown RBP7.96□□□□□ -1.14
CCDC58-207ENST00000498466 IGLV5-37A0A075B6J1 123 aa7.95□□□□□ -1.14
CCDC58-207ENST00000498466 PRLHP81277 87 aa7.95□□□□□ -1.14
CCDC58-207ENST00000498466 IGIPA6NJ69 53 aa7.94□□□□□ -1.14
CCDC58-207ENST00000498466 PRSS47A8MTI9 375 aa7.94□□□□□ -1.14
CCDC58-207ENST00000498466 NPSP0C0P6 89 aa7.94□□□□□ -1.14
CCDC58-207ENST00000498466 RAB5BP61020 215 aa7.94□□□□□ -1.14
CCDC58-207ENST00000498466 ASB16-AS1Q495Z4 193 aa7.94□□□□□ -1.14
CCDC58-207ENST00000498466 FAM19A1Q7Z5A9 133 aa7.94□□□□□ -1.14
CCDC58-207ENST00000498466 C3orf22Q8N5N4 141 aa7.94□□□□□ -1.14
CCDC58-207ENST00000498466 SCO1O75880 301 aa7.93□□□□□ -1.14
CCDC58-207ENST00000498466 ORMDL2Q53FV1 153 aa7.93□□□□□ -1.14
CCDC58-207ENST00000498466 SPAG11AQ6PDA7 123 aa7.93□□□□□ -1.14
CCDC58-207ENST00000498466 FP248Q71RG6 208 aaPredicted RBP7.93□□□□□ -1.14
CCDC58-207ENST00000498466 Q8N8P6 123 aa7.93□□□□□ -1.14
CCDC58-207ENST00000498466 LAMTOR2Q9Y2Q5 125 aa7.93□□□□□ -1.14
CCDC58-207ENST00000498466 SRSF3P84103 164 aaKnown RBP7.92□□□□□ -1.14
CCDC58-207ENST00000498466 PAPPA-AS1Q5QFB9 102 aa7.92□□□□□ -1.14
CCDC58-207ENST00000498466 ATP5L2Q7Z4Y8 100 aa7.92□□□□□ -1.14
CCDC58-207ENST00000498466 KRTAP19-1Q8IUB9 90 aa7.92□□□□□ -1.14
CCDC58-207ENST00000498466 COX7B2Q8TF08 81 aa7.92□□□□□ -1.14
CCDC58-207ENST00000498466 SMIM1B2RUZ4 78 aa7.91□□□□□ -1.14
CCDC58-207ENST00000498466 C9JQL5 133 aa7.91□□□□□ -1.14
CCDC58-207ENST00000498466 KRTAP13-3Q3SY46 172 aa7.91□□□□□ -1.14
CCDC58-207ENST00000498466 KRTAP4-1Q9BYQ7 146 aa7.91□□□□□ -1.14
CCDC58-207ENST00000498466 TMEM238C9JI98 176 aa7.9□□□□□ -1.14
CCDC58-207ENST00000498466 PDZD11Q5EBL8 140 aa7.9□□□□□ -1.14
CCDC58-207ENST00000498466 PLEKHB2Q96CS7 222 aa7.9□□□□□ -1.14
CCDC58-207ENST00000498466 TMEM126AQ9H061 195 aa7.9□□□□□ -1.14
CCDC58-207ENST00000498466 SEC61BP60468 96 aaKnown RBP7.89□□□□□ -1.15
CCDC58-207ENST00000498466 CBLN2Q8IUK8 224 aa7.89□□□□□ -1.15
CCDC58-207ENST00000498466 KRTAP4-8A0A0G2JLE6 195 aa7.88□□□□□ -1.15
CCDC58-207ENST00000498466 K7EMI3 77 aa7.88□□□□□ -1.15
CCDC58-207ENST00000498466 TIMM17AQ99595 171 aa7.88□□□□□ -1.15
CCDC58-207ENST00000498466 HIGD2AQ9BW72 106 aa7.87□□□□□ -1.15
CCDC58-207ENST00000498466 TINCRA0A1B0GVN0 87 aa7.86□□□□□ -1.15
CCDC58-207ENST00000498466 M0R378 163 aa7.86□□□□□ -1.15
CCDC58-207ENST00000498466 ATP5LO75964 103 aa7.86□□□□□ -1.15
CCDC58-207ENST00000498466 G0S2P27469 103 aa7.86□□□□□ -1.15
CCDC58-207ENST00000498466 PEA15Q15121 130 aa7.86□□□□□ -1.15
CCDC58-207ENST00000498466 AKAP14Q86UN6 197 aa7.86□□□□□ -1.15
CCDC58-207ENST00000498466 GNB1LQ9BYB4 327 aa7.86□□□□□ -1.15
CCDC58-207ENST00000498466 SPINK8P0C7L1 97 aa7.85□□□□□ -1.15
CCDC58-207ENST00000498466 PFN2P35080 140 aa7.85□□□□□ -1.15
CCDC58-207ENST00000498466 TOMM6Q96B49 74 aa7.85□□□□□ -1.15
CCDC58-207ENST00000498466 NXT2Q9NPJ8 142 aaKnown RBP7.85□□□□□ -1.15
CCDC58-207ENST00000498466 IGLV5-45A0A087WSX0 123 aa7.84□□□□□ -1.15
CCDC58-207ENST00000498466 VPREB1P12018 145 aa7.84□□□□□ -1.15
CCDC58-207ENST00000498466 DAND5Q8N907 189 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms