RNA–Protein interactions for RNA: ENST00000497980.5

STX1A-214, Transcript of syntaxin 1A, humanhuman

TSL 3

Gene STX1A, Length 503 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STX1A-214ENST00000497980 C2orf82Q6UX34 121 aa15.13■□□□□ 0.01
STX1A-214ENST00000497980 LINC00469Q8N7U9 141 aa15.13■□□□□ 0.01
STX1A-214ENST00000497980 TRAPPC1Q9Y5R8 145 aa15.13■□□□□ 0.01
STX1A-214ENST00000497980 TINCRA0A1B0GVN0 87 aa15.12■□□□□ 0.01
STX1A-214ENST00000497980 GAGE2EQ4V326 116 aa15.12■□□□□ 0.01
STX1A-214ENST00000497980 GAGE2DQ9UEU5 116 aa15.12■□□□□ 0.01
STX1A-214ENST00000497980 FAT3Q8TDW7 4589 aa15.11■□□□□ 0.01
STX1A-214ENST00000497980 REG3GQ6UW15 175 aa15.1■□□□□ 0.01
STX1A-214ENST00000497980 IGLV5-45A0A087WSX0 123 aa15.09■□□□□ 0.01
STX1A-214ENST00000497980 PMVKQ15126 192 aa15.09■□□□□ 0.01
STX1A-214ENST00000497980 CST9LQ9H4G1 147 aa15.09■□□□□ 0.01
STX1A-214ENST00000497980 F8VRH5 84 aa15.08■□□□□ 0
STX1A-214ENST00000497980 PHF5AQ7RTV0 110 aaKnown RBP15.08■□□□□ 0
STX1A-214ENST00000497980 MT1HL1P0DM35 61 aa15.07■□□□□ 0
STX1A-214ENST00000497980 RAB5BP61020 215 aa15.07■□□□□ 0
STX1A-214ENST00000497980 PDZD11Q5EBL8 140 aa15.07■□□□□ 0
STX1A-214ENST00000497980 FAM19A5Q7Z5A7 132 aaPredicted RBP15.07■□□□□ 0
STX1A-214ENST00000497980 PSORS1C2Q9UIG4 136 aa15.07■□□□□ 0
STX1A-214ENST00000497980 SMIM1B2RUZ4 78 aa15.06■□□□□ 0
STX1A-214ENST00000497980 C18orf32Q8TCD1 76 aa15.06■□□□□ 0
STX1A-214ENST00000497980 H3BRM9 83 aa15.05■□□□□ -0
STX1A-214ENST00000497980 LINC00614P0C842 121 aa15.05■□□□□ -0
STX1A-214ENST00000497980 SRSF9Q13242 221 aaKnown RBP eCLIP15.05■□□□□ -0
STX1A-214ENST00000497980 LINC01600Q96MT4 127 aa15.05■□□□□ -0
STX1A-214ENST00000497980 FAM168BA1KXE4 195 aa15.04■□□□□ -0
STX1A-214ENST00000497980 M0QXV9 152 aa15.04■□□□□ -0
STX1A-214ENST00000497980 HBDP02042 147 aa15.04■□□□□ -0
STX1A-214ENST00000497980 C1orf137Q5JT78 98 aa15.03■□□□□ -0
STX1A-214ENST00000497980 COX7B2Q8TF08 81 aa15.01□□□□□ -0.01
STX1A-214ENST00000497980 UBE2BP63146 152 aa15□□□□□ -0.01
STX1A-214ENST00000497980 ODF1Q14990 250 aa15□□□□□ -0.01
STX1A-214ENST00000497980 C9orf129Q5T035 196 aaKnown RBP15□□□□□ -0.01
STX1A-214ENST00000497980 A0A096LNJ9 63 aa14.99□□□□□ -0.01
STX1A-214ENST00000497980 ATP5LO75964 103 aa14.99□□□□□ -0.01
STX1A-214ENST00000497980 IGLC3P0DOY3 106 aa14.99□□□□□ -0.01
STX1A-214ENST00000497980 PLA2G2DQ9UNK4 145 aa14.98□□□□□ -0.01
STX1A-214ENST00000497980 NDUFA6P56556 154 aa14.97□□□□□ -0.01
STX1A-214ENST00000497980 URB1-AS1Q96HZ7 61 aa14.97□□□□□ -0.01
STX1A-214ENST00000497980 SPINK8P0C7L1 97 aa14.96□□□□□ -0.01
STX1A-214ENST00000497980 IGLV7-43P04211 117 aa14.95□□□□□ -0.02
STX1A-214ENST00000497980 KRTAP7-1Q8IUC3 87 aa14.95□□□□□ -0.02
STX1A-214ENST00000497980 YPEL4Q96NS1 127 aa14.95□□□□□ -0.02
STX1A-214ENST00000497980 DIRC1Q969H9 104 aa14.94□□□□□ -0.02
STX1A-214ENST00000497980 LBHQ53QV2 105 aaPredicted RBP14.93□□□□□ -0.02
STX1A-214ENST00000497980 CHCHD1Q96BP2 118 aaKnown RBP14.93□□□□□ -0.02
STX1A-214ENST00000497980 XAGE1AQ9HD64 81 aa14.93□□□□□ -0.02
STX1A-214ENST00000497980 PMCHL1Q16048 86 aa14.92□□□□□ -0.02
STX1A-214ENST00000497980 TP73-AS1Q9UF72 201 aa14.92□□□□□ -0.02
STX1A-214ENST00000497980 IGLV5-39A0A0G2JS06 123 aa14.9□□□□□ -0.02
STX1A-214ENST00000497980 SFTA2Q6UW10 78 aa14.9□□□□□ -0.02
STX1A-214ENST00000497980 ZNF22P17026 224 aaPredicted RBP14.89□□□□□ -0.03
STX1A-214ENST00000497980 C22orf24Q9Y442 160 aa14.89□□□□□ -0.03
STX1A-214ENST00000497980 BAGE3Q86Y29 109 aa14.88□□□□□ -0.03
STX1A-214ENST00000497980 KRTAP11-1Q8IUC1 163 aa14.88□□□□□ -0.03
STX1A-214ENST00000497980 NUPR1O60356 82 aa14.87□□□□□ -0.03
STX1A-214ENST00000497980 CBLN2Q8IUK8 224 aa14.87□□□□□ -0.03
STX1A-214ENST00000497980 H0Y9J4 135 aa14.86□□□□□ -0.03
STX1A-214ENST00000497980 KRTAP10-8P60410 259 aa14.86□□□□□ -0.03
STX1A-214ENST00000497980 MRPL55Q7Z7F7 128 aaKnown RBP14.85□□□□□ -0.03
STX1A-214ENST00000497980 TNXBP22105 4242 aa14.84□□□□□ -0.03
STX1A-214ENST00000497980 TMEM170BQ5T4T1 132 aa14.84□□□□□ -0.03
STX1A-214ENST00000497980 C11orf86A6NJI1 115 aa14.83□□□□□ -0.04
STX1A-214ENST00000497980 IFI27L1Q96BM0 104 aa14.83□□□□□ -0.04
STX1A-214ENST00000497980 TRAV12-1A0A0B4J245 112 aa14.82□□□□□ -0.04
STX1A-214ENST00000497980 HSBP1O75506 76 aa14.82□□□□□ -0.04
STX1A-214ENST00000497980 CHTOPQ9Y3Y2 248 aaKnown RBP14.82□□□□□ -0.04
STX1A-214ENST00000497980 HMCN2Q8NDA2 5059 aa14.82□□□□□ -0.04
STX1A-214ENST00000497980 COX17Q14061 63 aa14.81□□□□□ -0.04
STX1A-214ENST00000497980 IGLV5-37A0A075B6J1 123 aa14.79□□□□□ -0.04
STX1A-214ENST00000497980 NKAPP1Q8N9T2 125 aa14.79□□□□□ -0.04
STX1A-214ENST00000497980 ERG28Q9UKR5 140 aa14.78□□□□□ -0.04
STX1A-214ENST00000497980 ZNF861PO60384 105 aa14.77□□□□□ -0.05
STX1A-214ENST00000497980 PFN2P35080 140 aa14.77□□□□□ -0.05
STX1A-214ENST00000497980 TRGC2P03986 189 aa14.76□□□□□ -0.05
STX1A-214ENST00000497980 IGLV1-50A0A075B6I6 118 aa14.75□□□□□ -0.05
STX1A-214ENST00000497980 BCE1O60756 84 aa14.73□□□□□ -0.05
STX1A-214ENST00000497980 RPL28P46779 137 aaKnown RBP14.73□□□□□ -0.05
STX1A-214ENST00000497980 LINC00167Q96N53 147 aa14.73□□□□□ -0.05
STX1A-214ENST00000497980 TMEM223A0PJW6 202 aa14.72□□□□□ -0.05
STX1A-214ENST00000497980 SLC7A5P1Q8MH63 180 aa14.72□□□□□ -0.05
STX1A-214ENST00000497980 ZNF625Q96I27 306 aaPredicted RBP14.72□□□□□ -0.05
STX1A-214ENST00000497980 RPL13AP40429 203 aaKnown RBP14.71□□□□□ -0.05
STX1A-214ENST00000497980 RPL24P83731 157 aaKnown RBP14.71□□□□□ -0.05
STX1A-214ENST00000497980 SND1-IT1Q9HBX3 110 aa14.71□□□□□ -0.05
STX1A-214ENST00000497980 FAM19A2Q8N3H0 131 aa14.7□□□□□ -0.06
STX1A-214ENST00000497980 LEPROTL1O95214 131 aa14.69□□□□□ -0.06
STX1A-214ENST00000497980 PRR26Q8N8Z3 221 aa14.69□□□□□ -0.06
STX1A-214ENST00000497980 GAGE10A6NGK3 116 aa14.68□□□□□ -0.06
STX1A-214ENST00000497980 RPL37AP8A6NKH3 93 aa14.68□□□□□ -0.06
STX1A-214ENST00000497980 KRTAP1-4P0C5Y4 121 aa14.68□□□□□ -0.06
STX1A-214ENST00000497980 SERF1AO75920 110 aa14.67□□□□□ -0.06
STX1A-214ENST00000497980 HSPB8Q9UJY1 196 aa14.67□□□□□ -0.06
STX1A-214ENST00000497980 VPREB1P12018 145 aa14.65□□□□□ -0.06
STX1A-214ENST00000497980 HERV-K104P63124 156 aa14.65□□□□□ -0.06
STX1A-214ENST00000497980 LINC00587B1AMM8 73 aa14.64□□□□□ -0.07
STX1A-214ENST00000497980 LINC00158P58513 81 aa14.64□□□□□ -0.07
STX1A-214ENST00000497980 COLCA2A8K830 154 aa14.63□□□□□ -0.07
STX1A-214ENST00000497980 H0Y8G0 127 aa14.63□□□□□ -0.07
STX1A-214ENST00000497980 PLNP26678 52 aa14.63□□□□□ -0.07
STX1A-214ENST00000497980 UBE2AP49459 152 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms