RNA–Protein interactions for RNA: ENST00000497809.1

NEB-216, Transcript of nebulin, humanhuman

TSL 2

Gene NEB, Length 1,985 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-216ENST00000497809 FREM3P0C091 2139 aa4.35□□□□□ -1.71
NEB-216ENST00000497809 TRBV10-1A0A0K0K1A3 114 aa4.34□□□□□ -1.71
NEB-216ENST00000497809 RPL38P63173 70 aaKnown RBP4.34□□□□□ -1.71
NEB-216ENST00000497809 Q9BRP9 147 aa4.34□□□□□ -1.71
NEB-216ENST00000497809 R4GN34 69 aa4.34□□□□□ -1.71
NEB-216ENST00000497809 A0A0G2JMZ2 1700 aa4.34□□□□□ -1.71
NEB-216ENST00000497809 LRRC37A2A6NM11 1700 aa4.34□□□□□ -1.71
NEB-216ENST00000497809 LRRC37AA6NMS7 1700 aa4.34□□□□□ -1.71
NEB-216ENST00000497809 DOPEY1Q5JWR5 2465 aa4.34□□□□□ -1.71
NEB-216ENST00000497809 NDUFA3O95167 84 aa4.34□□□□□ -1.71
NEB-216ENST00000497809 WFDC9Q8NEX5 89 aa4.34□□□□□ -1.71
NEB-216ENST00000497809 COL27A1Q8IZC6 1860 aaPredicted RBP4.33□□□□□ -1.72
NEB-216ENST00000497809 IGKV1-17P01599 117 aa4.33□□□□□ -1.72
NEB-216ENST00000497809 BCORQ6W2J9 1755 aa4.33□□□□□ -1.72
NEB-216ENST00000497809 ARL14EPLP0DKL9 152 aa4.33□□□□□ -1.72
NEB-216ENST00000497809 ZNF137PP52743 207 aa4.33□□□□□ -1.72
NEB-216ENST00000497809 TPRP12270 2363 aaKnown RBP4.33□□□□□ -1.72
NEB-216ENST00000497809 NCOR1O75376 2440 aa4.32□□□□□ -1.72
NEB-216ENST00000497809 FBN3Q75N90 2809 aa4.32□□□□□ -1.72
NEB-216ENST00000497809 COL4A1P02462 1669 aa4.32□□□□□ -1.72
NEB-216ENST00000497809 IGIPA6NJ69 53 aa4.32□□□□□ -1.72
NEB-216ENST00000497809 KRTAP26-1Q6PEX3 210 aa4.32□□□□□ -1.72
NEB-216ENST00000497809 TTTY12Q9BZ98 90 aa4.32□□□□□ -1.72
NEB-216ENST00000497809 NDUFB1O75438 58 aa4.31□□□□□ -1.72
NEB-216ENST00000497809 TMEM14CQ9P0S9 112 aa4.31□□□□□ -1.72
NEB-216ENST00000497809 MUC3AQ02505 3323 aa4.31□□□□□ -1.72
NEB-216ENST00000497809 CFAP47Q6ZTR5 3102 aa4.31□□□□□ -1.72
NEB-216ENST00000497809 TRAV21A0A0B4J279 112 aa4.31□□□□□ -1.72
NEB-216ENST00000497809 TMEM167BQ9NRX6 74 aa4.31□□□□□ -1.72
NEB-216ENST00000497809 LINC01558Q9Y6Z2 57 aa4.31□□□□□ -1.72
NEB-216ENST00000497809 MYO18BQ8IUG5 2567 aa4.31□□□□□ -1.72
NEB-216ENST00000497809 ZFHX3Q15911 3703 aa4.3□□□□□ -1.72
NEB-216ENST00000497809 M0R135 149 aa4.3□□□□□ -1.72
NEB-216ENST00000497809 PRR34Q9NV39 138 aa4.3□□□□□ -1.72
NEB-216ENST00000497809 MRPL36Q9P0J6 103 aaKnown RBP4.3□□□□□ -1.72
NEB-216ENST00000497809 NRXN2Q9P2S2 1712 aa4.3□□□□□ -1.72
NEB-216ENST00000497809 GOLGA4Q13439 2230 aaKnown RBP4.3□□□□□ -1.72
NEB-216ENST00000497809 COL5A1P20908 1838 aaPredicted RBP4.3□□□□□ -1.72
NEB-216ENST00000497809 PRRC2BQ5JSZ5 2229 aaKnown RBP4.29□□□□□ -1.72
NEB-216ENST00000497809 CNBPP62633 177 aaKnown RBP4.29□□□□□ -1.72
NEB-216ENST00000497809 ERHP84090 104 aaKnown RBP4.29□□□□□ -1.72
NEB-216ENST00000497809 CACNA1DQ01668 2161 aa4.29□□□□□ -1.72
NEB-216ENST00000497809 C1orf137Q5JT78 98 aa4.29□□□□□ -1.72
NEB-216ENST00000497809 LINC00208Q96KT6 92 aa4.29□□□□□ -1.72
NEB-216ENST00000497809 PLAC8Q9NZF1 115 aa4.29□□□□□ -1.72
NEB-216ENST00000497809 IGKV3D-15A0A087WSY6 115 aa4.28□□□□□ -1.72
NEB-216ENST00000497809 CPSF4LA6NMK7 179 aaKnown RBP4.28□□□□□ -1.72
NEB-216ENST00000497809 ACACBO00763 2458 aa4.28□□□□□ -1.72
NEB-216ENST00000497809 PRR14LQ5THK1 2151 aa4.28□□□□□ -1.72
NEB-216ENST00000497809 HIGD2AQ9BW72 106 aa4.28□□□□□ -1.72
NEB-216ENST00000497809 ZFHX2Q9C0A1 2572 aaPredicted RBP4.28□□□□□ -1.72
NEB-216ENST00000497809 DOCK10Q96BY6 2186 aa4.28□□□□□ -1.72
NEB-216ENST00000497809 RANBP2P49792 3224 aaKnown RBP4.28□□□□□ -1.73
NEB-216ENST00000497809 Q86TA4 180 aa4.27□□□□□ -1.73
NEB-216ENST00000497809 LCE6AA0A183 80 aa4.27□□□□□ -1.73
NEB-216ENST00000497809 IGLV3-19P01714 112 aa4.27□□□□□ -1.73
NEB-216ENST00000497809 DMAC1Q96GE9 116 aa4.27□□□□□ -1.73
NEB-216ENST00000497809 AMELXQ99217 191 aa4.27□□□□□ -1.73
NEB-216ENST00000497809 PLXNB2O15031 1838 aa4.27□□□□□ -1.73
NEB-216ENST00000497809 TNRC6BQ9UPQ9 1833 aaKnown RBP4.27□□□□□ -1.73
NEB-216ENST00000497809 ARFGEF3Q5TH69 2177 aa4.26□□□□□ -1.73
NEB-216ENST00000497809 MAP1BP46821 2468 aaKnown RBP4.26□□□□□ -1.73
NEB-216ENST00000497809 CTSGP08311 255 aa4.25□□□□□ -1.73
NEB-216ENST00000497809 SPINK7P58062 85 aa4.25□□□□□ -1.73
NEB-216ENST00000497809 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.25□□□□□ -1.73
NEB-216ENST00000497809 COX7B2Q8TF08 81 aa4.25□□□□□ -1.73
NEB-216ENST00000497809 MKI67P46013 3256 aaKnown RBP4.25□□□□□ -1.73
NEB-216ENST00000497809 JMJD7-PLA2G4BH0Y9G9 81 aa4.25□□□□□ -1.73
NEB-216ENST00000497809 HCP5Q6MZN7 132 aa4.25□□□□□ -1.73
NEB-216ENST00000497809 ZCCHC13Q8WW36 166 aaKnown RBP4.25□□□□□ -1.73
NEB-216ENST00000497809 CR1P17927 2039 aa4.25□□□□□ -1.73
NEB-216ENST00000497809 NUPR2A6NF83 97 aa4.24□□□□□ -1.73
NEB-216ENST00000497809 SPINT4Q6UDR6 99 aa4.24□□□□□ -1.73
NEB-216ENST00000497809 ABCA12Q86UK0 2595 aa4.24□□□□□ -1.73
NEB-216ENST00000497809 RP1P56715 2156 aa4.24□□□□□ -1.73
NEB-216ENST00000497809 USP24Q9UPU5 2620 aa4.23□□□□□ -1.73
NEB-216ENST00000497809 IGKV3-7A0A075B6H7 116 aa4.23□□□□□ -1.73
NEB-216ENST00000497809 TRBV6-1A0A0K0K1D8 114 aa4.23□□□□□ -1.73
NEB-216ENST00000497809 IGKV3-20P01619 116 aa4.23□□□□□ -1.73
NEB-216ENST00000497809 TTTY10Q9BZA0 68 aa4.23□□□□□ -1.73
NEB-216ENST00000497809 TFF3Q07654 80 aa4.22□□□□□ -1.73
NEB-216ENST00000497809 R4GMQ9 66 aa4.22□□□□□ -1.73
NEB-216ENST00000497809 CFAP54Q96N23 3096 aa4.22□□□□□ -1.73
NEB-216ENST00000497809 MED12Q93074 2177 aa4.22□□□□□ -1.73
NEB-216ENST00000497809 IAPPP10997 89 aa4.21□□□□□ -1.74
NEB-216ENST00000497809 PRO2289Q9P1D8 64 aa4.21□□□□□ -1.74
NEB-216ENST00000497809 FREM1Q5H8C1 2179 aa4.21□□□□□ -1.74
NEB-216ENST00000497809 ITPR3Q14573 2671 aa4.21□□□□□ -1.74
NEB-216ENST00000497809 H0Y9P7 68 aa4.2□□□□□ -1.74
NEB-216ENST00000497809 RNASE3P12724 160 aaKnown RBP4.2□□□□□ -1.74
NEB-216ENST00000497809 ZNF625Q96I27 306 aaPredicted RBP4.2□□□□□ -1.74
NEB-216ENST00000497809 WFDC10AQ9H1F0 79 aa4.2□□□□□ -1.74
NEB-216ENST00000497809 PRUNE2Q8WUY3 3088 aa4.2□□□□□ -1.74
NEB-216ENST00000497809 A0A1W2PNU3 283 aaPredicted RBP4.2□□□□□ -1.74
NEB-216ENST00000497809 CCL18P55774 89 aa4.2□□□□□ -1.74
NEB-216ENST00000497809 PDE6HQ13956 83 aa4.2□□□□□ -1.74
NEB-216ENST00000497809 ARHGAP5-AS1Q96IT6 56 aa4.2□□□□□ -1.74
NEB-216ENST00000497809 HRES1P13985 223 aa4.19□□□□□ -1.74
NEB-216ENST00000497809 CCL3L1P16619 93 aa4.19□□□□□ -1.74
NEB-216ENST00000497809 PDE6GP18545 87 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms