RNA–Protein interactions for RNA: ENST00000497677.5

CTDSP1-214, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 998 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-214ENST00000497677 LINC00959A0A1B0GUT2 108 aa10.45□□□□□ -0.74
CTDSP1-214ENST00000497677 REG3AQ06141 175 aa10.45□□□□□ -0.74
CTDSP1-214ENST00000497677 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.44□□□□□ -0.74
CTDSP1-214ENST00000497677 MYMXA0A1B0GTQ4 84 aa10.44□□□□□ -0.74
CTDSP1-214ENST00000497677 LINC00587B1AMM8 73 aa10.44□□□□□ -0.74
CTDSP1-214ENST00000497677 J3QQQ9 107 aa10.44□□□□□ -0.74
CTDSP1-214ENST00000497677 LGALS3P17931 250 aaKnown RBP10.44□□□□□ -0.74
CTDSP1-214ENST00000497677 PCP2Q8IVA1 136 aa10.44□□□□□ -0.74
CTDSP1-214ENST00000497677 LINC01561Q8N1V8 128 aa10.44□□□□□ -0.74
CTDSP1-214ENST00000497677 FAM30AQ9NZY2 134 aa10.44□□□□□ -0.74
CTDSP1-214ENST00000497677 HIGD1BQ9P298 99 aa10.44□□□□□ -0.74
CTDSP1-214ENST00000497677 CDKN2A-AS1Q9UH64 79 aa10.44□□□□□ -0.74
CTDSP1-214ENST00000497677 DNAH8Q96JB1 4490 aa10.43□□□□□ -0.74
CTDSP1-214ENST00000497677 FAT1Q14517 4588 aa10.42□□□□□ -0.74
CTDSP1-214ENST00000497677 TRAV8-4A0A0B4J246 113 aa10.41□□□□□ -0.74
CTDSP1-214ENST00000497677 ZNF815PA8K554 130 aa10.41□□□□□ -0.74
CTDSP1-214ENST00000497677 USP17L23D6RBM5 183 aa10.41□□□□□ -0.74
CTDSP1-214ENST00000497677 COX6A2Q02221 97 aa10.41□□□□□ -0.74
CTDSP1-214ENST00000497677 IGLV10-54A0A075B6I4 117 aa10.4□□□□□ -0.74
CTDSP1-214ENST00000497677 A0A087WZ39 114 aa10.4□□□□□ -0.74
CTDSP1-214ENST00000497677 IGHV3OR16-9A0A0B4J2B5 98 aa10.4□□□□□ -0.74
CTDSP1-214ENST00000497677 IGKV3OR2-268A0A0C4DH90 116 aa10.4□□□□□ -0.74
CTDSP1-214ENST00000497677 IGLV5-39A0A0G2JS06 123 aa10.4□□□□□ -0.74
CTDSP1-214ENST00000497677 CTAG1AP78358 180 aa10.4□□□□□ -0.74
CTDSP1-214ENST00000497677 LINC01620Q4KN68 170 aa10.4□□□□□ -0.74
CTDSP1-214ENST00000497677 CD164L2Q6UWJ8 174 aa10.4□□□□□ -0.74
CTDSP1-214ENST00000497677 Q6ZSA8 131 aa10.4□□□□□ -0.74
CTDSP1-214ENST00000497677 M0R143 59 aa10.39□□□□□ -0.75
CTDSP1-214ENST00000497677 SPINK8P0C7L1 97 aa10.39□□□□□ -0.75
CTDSP1-214ENST00000497677 HAMPP81172 84 aa10.39□□□□□ -0.75
CTDSP1-214ENST00000497677 SFTA2Q6UW10 78 aa10.39□□□□□ -0.75
CTDSP1-214ENST00000497677 SMIM1B2RUZ4 78 aa10.38□□□□□ -0.75
CTDSP1-214ENST00000497677 TAL2Q16559 108 aa10.38□□□□□ -0.75
CTDSP1-214ENST00000497677 C14orf177Q52M58 125 aa10.38□□□□□ -0.75
CTDSP1-214ENST00000497677 LBHQ53QV2 105 aaPredicted RBP10.38□□□□□ -0.75
CTDSP1-214ENST00000497677 C2orf91Q6ZV80 131 aa10.38□□□□□ -0.75
CTDSP1-214ENST00000497677 HSD52Q0P140 79 aa10.37□□□□□ -0.75
CTDSP1-214ENST00000497677 SCGB1D4Q6XE38 83 aa10.37□□□□□ -0.75
CTDSP1-214ENST00000497677 XCL1P47992 114 aa10.36□□□□□ -0.75
CTDSP1-214ENST00000497677 CHCHD10Q8WYQ3 142 aaPredicted RBP10.36□□□□□ -0.75
CTDSP1-214ENST00000497677 IGHV3-64A0A075B6Q5 118 aa10.35□□□□□ -0.75
CTDSP1-214ENST00000497677 COX7A2LO14548 114 aa10.35□□□□□ -0.75
CTDSP1-214ENST00000497677 TSPEAR-AS2P59090 65 aa10.35□□□□□ -0.75
CTDSP1-214ENST00000497677 TTTY13Q9BZ97 58 aa10.35□□□□□ -0.75
CTDSP1-214ENST00000497677 NDUFA12Q9UI09 145 aa10.35□□□□□ -0.75
CTDSP1-214ENST00000497677 NDUFA1O15239 70 aa10.34□□□□□ -0.75
CTDSP1-214ENST00000497677 SMR3BP02814 79 aaPredicted RBP10.34□□□□□ -0.75
CTDSP1-214ENST00000497677 HERV-K104P63124 156 aa10.34□□□□□ -0.75
CTDSP1-214ENST00000497677 EPM2AB3EWF7 344 aa10.33□□□□□ -0.76
CTDSP1-214ENST00000497677 APOMO95445 188 aa10.33□□□□□ -0.76
CTDSP1-214ENST00000497677 GAGE12HA6NDE8 117 aa10.32□□□□□ -0.76
CTDSP1-214ENST00000497677 TMEM238C9JI98 176 aa10.32□□□□□ -0.76
CTDSP1-214ENST00000497677 TIMM17BO60830 172 aa10.32□□□□□ -0.76
CTDSP1-214ENST00000497677 COX7B2Q8TF08 81 aa10.32□□□□□ -0.76
CTDSP1-214ENST00000497677 SPANXB1Q9NS25 103 aaPredicted RBP10.32□□□□□ -0.76
CTDSP1-214ENST00000497677 TP73-AS1Q9UF72 201 aa10.32□□□□□ -0.76
CTDSP1-214ENST00000497677 SLPIP03973 132 aa10.31□□□□□ -0.76
CTDSP1-214ENST00000497677 MALP21145 153 aa10.31□□□□□ -0.76
CTDSP1-214ENST00000497677 FOXI1Q12951 378 aa10.31□□□□□ -0.76
CTDSP1-214ENST00000497677 CIRBPQ14011 172 aaKnown RBP10.31□□□□□ -0.76
CTDSP1-214ENST00000497677 Q6ZVH6 145 aa10.31□□□□□ -0.76
CTDSP1-214ENST00000497677 C5orf38Q86SI9 138 aa10.31□□□□□ -0.76
CTDSP1-214ENST00000497677 Q8IZM0 81 aa10.31□□□□□ -0.76
CTDSP1-214ENST00000497677 C9orf163Q8N9P6 203 aa10.31□□□□□ -0.76
CTDSP1-214ENST00000497677 SNHG12Q9BXW3 62 aa10.31□□□□□ -0.76
CTDSP1-214ENST00000497677 PRSS2P07478 247 aa10.3□□□□□ -0.76
CTDSP1-214ENST00000497677 CXCL5P42830 114 aa10.3□□□□□ -0.76
CTDSP1-214ENST00000497677 Q5VSD8 79 aa10.3□□□□□ -0.76
CTDSP1-214ENST00000497677 HIST1H4GQ99525 98 aa10.3□□□□□ -0.76
CTDSP1-214ENST00000497677 A0A0J9YXY3 114 aa10.29□□□□□ -0.76
CTDSP1-214ENST00000497677 HINT1P49773 126 aaPredicted RBP10.29□□□□□ -0.76
CTDSP1-214ENST00000497677 CNBPP62633 177 aaKnown RBP10.29□□□□□ -0.76
CTDSP1-214ENST00000497677 BVES-AS1Q5T3Y7 98 aa10.29□□□□□ -0.76
CTDSP1-214ENST00000497677 SCXQ7RTU7 201 aa10.29□□□□□ -0.76
CTDSP1-214ENST00000497677 C15orf56Q8N910 161 aa10.29□□□□□ -0.76
CTDSP1-214ENST00000497677 SRSF9Q13242 221 aaKnown RBP eCLIP10.28□□□□□ -0.76
CTDSP1-214ENST00000497677 C6orf226Q5I0X4 101 aa10.28□□□□□ -0.76
CTDSP1-214ENST00000497677 COL5A1-AS1Q5SY13 56 aa10.28□□□□□ -0.76
CTDSP1-214ENST00000497677 SDIM1Q6ZPB5 146 aa10.28□□□□□ -0.76
CTDSP1-214ENST00000497677 CEND1Q8N111 149 aa10.28□□□□□ -0.76
CTDSP1-214ENST00000497677 ORAOV1Q8WV07 137 aa10.28□□□□□ -0.76
CTDSP1-214ENST00000497677 COPS9Q8WXC6 57 aa10.28□□□□□ -0.76
CTDSP1-214ENST00000497677 ZNF625Q96I27 306 aaPredicted RBP10.28□□□□□ -0.76
CTDSP1-214ENST00000497677 TMEM238LA0A1B0GVL6 79 aa10.27□□□□□ -0.77
CTDSP1-214ENST00000497677 A6NDN8 102 aa10.27□□□□□ -0.77
CTDSP1-214ENST00000497677 A6NJY4 79 aa10.27□□□□□ -0.77
CTDSP1-214ENST00000497677 TOMM7Q9P0U1 55 aa10.27□□□□□ -0.77
CTDSP1-214ENST00000497677 VPS13BQ7Z7G8 4022 aa10.27□□□□□ -0.77
CTDSP1-214ENST00000497677 BATFQ16520 125 aa10.26□□□□□ -0.77
CTDSP1-214ENST00000497677 CFAP161Q6P656 301 aa10.26□□□□□ -0.77
CTDSP1-214ENST00000497677 CIRBP-AS1Q8TBR5 109 aa10.26□□□□□ -0.77
CTDSP1-214ENST00000497677 SPANXDQ9BXN6 97 aa10.26□□□□□ -0.77
CTDSP1-214ENST00000497677 SPANXCQ9NY87 97 aa10.26□□□□□ -0.77
CTDSP1-214ENST00000497677 F8WDY8 70 aa10.24□□□□□ -0.77
CTDSP1-214ENST00000497677 FAM229AH3BQW9 127 aa10.24□□□□□ -0.77
CTDSP1-214ENST00000497677 IFITM1P13164 125 aa10.24□□□□□ -0.77
CTDSP1-214ENST00000497677 PTTG1IPP53801 180 aa10.24□□□□□ -0.77
CTDSP1-214ENST00000497677 CKS1BP61024 79 aa10.24□□□□□ -0.77
CTDSP1-214ENST00000497677 PPDPFQ9H3Y8 114 aa10.24□□□□□ -0.77
CTDSP1-214ENST00000497677 GVQW2A0A096LPI5 108 aaPredicted RBP10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms