RNA–Protein interactions for RNA: ENST00000497022.1

VPS26A-208, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-208ENST00000497022 IQCF6A8MYZ5 107 aa0.4□□□□□ -2.35
VPS26A-208ENST00000497022 SPAG11BQ08648 103 aa0.4□□□□□ -2.35
VPS26A-208ENST00000497022 PMCHL1Q16048 86 aa0.4□□□□□ -2.35
VPS26A-208ENST00000497022 FAM74A4Q5TZK3 123 aa0.4□□□□□ -2.35
VPS26A-208ENST00000497022 SPAG11AQ6PDA7 123 aa0.4□□□□□ -2.35
VPS26A-208ENST00000497022 AP4S1Q9Y587 144 aa0.4□□□□□ -2.35
VPS26A-208ENST00000497022 LINC01558Q9Y6Z2 57 aa0.4□□□□□ -2.35
VPS26A-208ENST00000497022 ARL2-SNX15V9GYD0 113 aa0.4□□□□□ -2.35
VPS26A-208ENST00000497022 POLR1AO95602 1720 aaPredicted RBP0.4□□□□□ -2.35
VPS26A-208ENST00000497022 PKD1L3Q7Z443 1732 aa0.4□□□□□ -2.35
VPS26A-208ENST00000497022 XRN1Q8IZH2 1706 aaKnown RBP0.4□□□□□ -2.35
VPS26A-208ENST00000497022 PLIN4Q96Q06 1357 aa0.4□□□□□ -2.35
VPS26A-208ENST00000497022 KIF20BQ96Q89 1820 aa0.4□□□□□ -2.35
VPS26A-208ENST00000497022 NAV3Q8IVL0 2385 aa0.4□□□□□ -2.35
VPS26A-208ENST00000497022 CDC42BPGQ6DT37 1551 aa0.4□□□□□ -2.35
VPS26A-208ENST00000497022 INO80Q9ULG1 1556 aaPredicted RBP0.4□□□□□ -2.35
VPS26A-208ENST00000497022 POLQO75417 2590 aa0.4□□□□□ -2.35
VPS26A-208ENST00000497022 REV3LO60673 3130 aa0.4□□□□□ -2.35
VPS26A-208ENST00000497022 MYO7AQ13402 2215 aa0.4□□□□□ -2.35
VPS26A-208ENST00000497022 MUC5ACP98088 5654 aa0.39□□□□□ -2.35
VPS26A-208ENST00000497022 ERICH3Q5RHP9 1530 aa0.39□□□□□ -2.35
VPS26A-208ENST00000497022 TULP4Q9NRJ4 1543 aa0.39□□□□□ -2.35
VPS26A-208ENST00000497022 PTPN23Q9H3S7 1636 aa0.39□□□□□ -2.35
VPS26A-208ENST00000497022 EIF2AK4Q9P2K8 1649 aaKnown RBP0.39□□□□□ -2.35
VPS26A-208ENST00000497022 DOT1LQ8TEK3 1739 aa0.39□□□□□ -2.35
VPS26A-208ENST00000497022 MYCBP2O75592 4640 aa0.39□□□□□ -2.35
VPS26A-208ENST00000497022 HUWE1Q7Z6Z7 4374 aaKnown RBP0.39□□□□□ -2.35
VPS26A-208ENST00000497022 F8VRH5 84 aa0.39□□□□□ -2.35
VPS26A-208ENST00000497022 H3BUT2 72 aa0.39□□□□□ -2.35
VPS26A-208ENST00000497022 GYPAP02724 150 aa0.39□□□□□ -2.35
VPS26A-208ENST00000497022 ACYP2P14621 99 aa0.39□□□□□ -2.35
VPS26A-208ENST00000497022 HAMPP81172 84 aa0.39□□□□□ -2.35
VPS26A-208ENST00000497022 DEFB107AQ8IZN7 70 aa0.39□□□□□ -2.35
VPS26A-208ENST00000497022 UQCR10Q9UDW1 63 aa0.39□□□□□ -2.35
VPS26A-208ENST00000497022 V9GYV3 84 aa0.39□□□□□ -2.35
VPS26A-208ENST00000497022 TNXBP22105 4242 aa0.39□□□□□ -2.35
VPS26A-208ENST00000497022 ATP7BP35670 1465 aa0.39□□□□□ -2.35
VPS26A-208ENST00000497022 SAMD9Q5K651 1589 aa0.39□□□□□ -2.35
VPS26A-208ENST00000497022 DNAH11Q96DT5 4516 aa0.39□□□□□ -2.35
VPS26A-208ENST00000497022 ASXL1Q8IXJ9 1541 aa0.38□□□□□ -2.35
VPS26A-208ENST00000497022 SETBP1Q9Y6X0 1596 aa0.38□□□□□ -2.35
VPS26A-208ENST00000497022 TRBV7-4A0A0J9YYF1 115 aa0.38□□□□□ -2.35
VPS26A-208ENST00000497022 LINC00959A0A1B0GUT2 108 aa0.38□□□□□ -2.35
VPS26A-208ENST00000497022 C7orf77A4D0Y5 90 aa0.38□□□□□ -2.35
VPS26A-208ENST00000497022 F2Z2F3 143 aa0.38□□□□□ -2.35
VPS26A-208ENST00000497022 CFDP00746 253 aaPredicted RBP0.38□□□□□ -2.35
VPS26A-208ENST00000497022 ARMS2P0C7Q2 107 aa0.38□□□□□ -2.35
VPS26A-208ENST00000497022 S100A3P33764 101 aa0.38□□□□□ -2.35
VPS26A-208ENST00000497022 PSMG4Q5JS54 123 aa0.38□□□□□ -2.35
VPS26A-208ENST00000497022 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.38□□□□□ -2.35
VPS26A-208ENST00000497022 KRTAP19-3Q7Z4W3 81 aa0.38□□□□□ -2.35
VPS26A-208ENST00000497022 FAM103A1Q9BTL3 118 aaKnown RBP0.38□□□□□ -2.35
VPS26A-208ENST00000497022 ST20Q9HBF5 79 aa0.38□□□□□ -2.35
VPS26A-208ENST00000497022 UBE2D4Q9Y2X8 147 aa0.38□□□□□ -2.35
VPS26A-208ENST00000497022 TIAM2Q8IVF5 1701 aa0.38□□□□□ -2.35
VPS26A-208ENST00000497022 BSNQ9UPA5 3926 aa0.38□□□□□ -2.35
VPS26A-208ENST00000497022 CICQ96RK0 1608 aaPredicted RBP0.38□□□□□ -2.35
VPS26A-208ENST00000497022 KCPQ6ZWJ8 1503 aa0.38□□□□□ -2.35
VPS26A-208ENST00000497022 LRP1Q07954 4544 aaKnown RBP0.37□□□□□ -2.35
VPS26A-208ENST00000497022 KMT2DO14686 5537 aa0.37□□□□□ -2.35
VPS26A-208ENST00000497022 VPS13BQ7Z7G8 4022 aa0.37□□□□□ -2.35
VPS26A-208ENST00000497022 ITSN2Q9NZM3 1697 aa0.37□□□□□ -2.35
VPS26A-208ENST00000497022 DNAJC13O75165 2243 aa0.37□□□□□ -2.35
VPS26A-208ENST00000497022 TNCP24821 2201 aa0.37□□□□□ -2.35
VPS26A-208ENST00000497022 ASXL3Q9C0F0 2248 aa0.37□□□□□ -2.35
VPS26A-208ENST00000497022 IQSEC2Q5JU85 1478 aa0.37□□□□□ -2.35
VPS26A-208ENST00000497022 LRRC9Q6ZRR7 1453 aa0.37□□□□□ -2.35
VPS26A-208ENST00000497022 PLXNB2O15031 1838 aa0.37□□□□□ -2.35
VPS26A-208ENST00000497022 CTXND1A0A1B0GTU2 59 aa0.37□□□□□ -2.35
VPS26A-208ENST00000497022 ZNF815PA8K554 130 aa0.37□□□□□ -2.35
VPS26A-208ENST00000497022 I3L2K1 104 aa0.37□□□□□ -2.35
VPS26A-208ENST00000497022 NDUFC1O43677 76 aa0.37□□□□□ -2.35
VPS26A-208ENST00000497022 HMGN2P05204 90 aaKnown RBP0.37□□□□□ -2.35
VPS26A-208ENST00000497022 COX6CP09669 75 aa0.37□□□□□ -2.35
VPS26A-208ENST00000497022 KRTDAPP60985 99 aa0.37□□□□□ -2.35
VPS26A-208ENST00000497022 C10orf113Q5VZT2 155 aa0.37□□□□□ -2.35
VPS26A-208ENST00000497022 SPATA8Q6RVD6 105 aa0.37□□□□□ -2.35
VPS26A-208ENST00000497022 Q6ZRX8 168 aa0.37□□□□□ -2.35
VPS26A-208ENST00000497022 BAGE2Q86Y30 109 aa0.37□□□□□ -2.35
VPS26A-208ENST00000497022 CRIPTQ9P021 101 aa0.37□□□□□ -2.35
VPS26A-208ENST00000497022 LRRC37A2A6NM11 1700 aa0.37□□□□□ -2.35
VPS26A-208ENST00000497022 RICTORQ6R327 1708 aa0.37□□□□□ -2.35
VPS26A-208ENST00000497022 NRAPQ86VF7 1730 aa0.37□□□□□ -2.35
VPS26A-208ENST00000497022 FMN2Q9NZ56 1722 aa0.37□□□□□ -2.35
VPS26A-208ENST00000497022 PKD1P98161 4303 aa0.37□□□□□ -2.35
VPS26A-208ENST00000497022 LRRC7Q96NW7 1537 aa0.37□□□□□ -2.35
VPS26A-208ENST00000497022 CACNA1CQ13936 2221 aa0.37□□□□□ -2.35
VPS26A-208ENST00000497022 RGPD8O14715 1765 aaPredicted RBP0.37□□□□□ -2.35
VPS26A-208ENST00000497022 RGPD5Q99666 1765 aa0.37□□□□□ -2.35
VPS26A-208ENST00000497022 CFAP43Q8NDM7 1665 aa0.37□□□□□ -2.35
VPS26A-208ENST00000497022 ANKRD36A6QL64 1941 aa0.36□□□□□ -2.35
VPS26A-208ENST00000497022 DIP2AQ14689 1571 aa0.36□□□□□ -2.35
VPS26A-208ENST00000497022 ABCA6Q8N139 1617 aa0.36□□□□□ -2.35
VPS26A-208ENST00000497022 PIGBOS1A0A0B4J2F0 54 aa0.36□□□□□ -2.35
VPS26A-208ENST00000497022 SAA2P0DJI9 122 aaPredicted RBP0.36□□□□□ -2.35
VPS26A-208ENST00000497022 HMGA1P17096 107 aaKnown RBP0.36□□□□□ -2.35
VPS26A-208ENST00000497022 DEFB121Q5J5C9 76 aa0.36□□□□□ -2.35
VPS26A-208ENST00000497022 BAGE3Q86Y29 109 aa0.36□□□□□ -2.35
VPS26A-208ENST00000497022 C18orf32Q8TCD1 76 aa0.36□□□□□ -2.35
VPS26A-208ENST00000497022 BCORQ6W2J9 1755 aa0.36□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms