RNA–Protein interactions for RNA: ENST00000496910.1

EXOSC3-208, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 217 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-208ENST00000496910 ZCCHC23Q6ZST2 131 aa2.01□□□□□ -2.09
EXOSC3-208ENST00000496910 OR4X2Q8NGF9 303 aa2.01□□□□□ -2.09
EXOSC3-208ENST00000496910 Q8TAT8 98 aa2.01□□□□□ -2.09
EXOSC3-208ENST00000496910 HEATR5BQ9P2D3 2071 aa2.01□□□□□ -2.09
EXOSC3-208ENST00000496910 RTL8CO15255 209 aa2□□□□□ -2.09
EXOSC3-208ENST00000496910 IGKV3-11P04433 115 aa2□□□□□ -2.09
EXOSC3-208ENST00000496910 LY6EQ16553 131 aa2□□□□□ -2.09
EXOSC3-208ENST00000496910 SLC25A26Q70HW3 274 aa2□□□□□ -2.09
EXOSC3-208ENST00000496910 SMIM7Q9BQ49 75 aa2□□□□□ -2.09
EXOSC3-208ENST00000496910 TMEM242Q9NWH2 141 aa2□□□□□ -2.09
EXOSC3-208ENST00000496910 NDUFB11Q9NX14 153 aa2□□□□□ -2.09
EXOSC3-208ENST00000496910 DSTQ03001 7570 aaKnown RBP1.99□□□□□ -2.09
EXOSC3-208ENST00000496910 IGLV4-60A0A075B6I1 120 aa1.99□□□□□ -2.09
EXOSC3-208ENST00000496910 TRAV10A0A0B4J240 114 aa1.99□□□□□ -2.09
EXOSC3-208ENST00000496910 TRAV12-1A0A0B4J245 112 aa1.99□□□□□ -2.09
EXOSC3-208ENST00000496910 TCRBV4S1A1TA0A5B7 111 aa1.99□□□□□ -2.09
EXOSC3-208ENST00000496910 LRCOL1A6NCL2 159 aa1.99□□□□□ -2.09
EXOSC3-208ENST00000496910 TMEM262E9PQX1 116 aa1.99□□□□□ -2.09
EXOSC3-208ENST00000496910 IL5P05113 134 aa1.99□□□□□ -2.09
EXOSC3-208ENST00000496910 GYPBP06028 91 aa1.99□□□□□ -2.09
EXOSC3-208ENST00000496910 CTSGP08311 255 aa1.99□□□□□ -2.09
EXOSC3-208ENST00000496910 PIRTP0C851 137 aa1.99□□□□□ -2.09
EXOSC3-208ENST00000496910 MIR22HGQ0VDD5 57 aa1.99□□□□□ -2.09
EXOSC3-208ENST00000496910 CASC2Q6XLA1 102 aa1.99□□□□□ -2.09
EXOSC3-208ENST00000496910 Q8N8P6 123 aa1.99□□□□□ -2.09
EXOSC3-208ENST00000496910 TMEM254Q8TBM7 123 aa1.99□□□□□ -2.09
EXOSC3-208ENST00000496910 SPTSSAQ969W0 71 aa1.99□□□□□ -2.09
EXOSC3-208ENST00000496910 LPAP08519 4548 aa1.99□□□□□ -2.09
EXOSC3-208ENST00000496910 TRAV14DV4A0A0A6YYC5 116 aa1.98□□□□□ -2.09
EXOSC3-208ENST00000496910 TCRBV3S1A0A5B6 114 aa1.98□□□□□ -2.09
EXOSC3-208ENST00000496910 C2orf70A6NJV1 201 aa1.98□□□□□ -2.09
EXOSC3-208ENST00000496910 ERC2-IT1O76042 136 aa1.98□□□□□ -2.09
EXOSC3-208ENST00000496910 ADCYAP1P18509 176 aa1.98□□□□□ -2.09
EXOSC3-208ENST00000496910 NPC2P61916 151 aa1.98□□□□□ -2.09
EXOSC3-208ENST00000496910 INSL4Q14641 139 aa1.98□□□□□ -2.09
EXOSC3-208ENST00000496910 TPRXLQ17RH7 258 aa1.98□□□□□ -2.09
EXOSC3-208ENST00000496910 KRTAP5-10Q6L8G5 202 aa1.98□□□□□ -2.09
EXOSC3-208ENST00000496910 KRTAP26-1Q6PEX3 210 aa1.98□□□□□ -2.09
EXOSC3-208ENST00000496910 Q6ZTI0 123 aa1.98□□□□□ -2.09
EXOSC3-208ENST00000496910 CLECL1Q8IZS7 167 aa1.98□□□□□ -2.09
EXOSC3-208ENST00000496910 KRTAP4-4Q9BYR3 166 aa1.98□□□□□ -2.09
EXOSC3-208ENST00000496910 Q9H521 79 aa1.98□□□□□ -2.09
EXOSC3-208ENST00000496910 SCP2D1Q9UJQ7 156 aa1.98□□□□□ -2.09
EXOSC3-208ENST00000496910 V9GYS6 101 aa1.98□□□□□ -2.09
EXOSC3-208ENST00000496910 DOCK11Q5JSL3 2073 aa1.98□□□□□ -2.09
EXOSC3-208ENST00000496910 AHNAKQ09666 5890 aaKnown RBP1.97□□□□□ -2.09
EXOSC3-208ENST00000496910 TRAV17A0A0B4J275 112 aa1.97□□□□□ -2.09
EXOSC3-208ENST00000496910 A0A0G2JQZ4 141 aa1.97□□□□□ -2.09
EXOSC3-208ENST00000496910 SPTY2D1-AS1A0A0U1RR47 76 aa1.97□□□□□ -2.09
EXOSC3-208ENST00000496910 NDUFB6O95139 128 aa1.97□□□□□ -2.09
EXOSC3-208ENST00000496910 MT-ATP8P03928 68 aa1.97□□□□□ -2.09
EXOSC3-208ENST00000496910 HMGA1P17096 107 aaKnown RBP1.97□□□□□ -2.09
EXOSC3-208ENST00000496910 KRTAP13-2Q52LG2 175 aa1.97□□□□□ -2.09
EXOSC3-208ENST00000496910 DYNLRB2Q8TF09 96 aa1.97□□□□□ -2.09
EXOSC3-208ENST00000496910 TSKUQ8WUA8 353 aa1.97□□□□□ -2.09
EXOSC3-208ENST00000496910 AQP10Q96PS8 301 aa1.97□□□□□ -2.09
EXOSC3-208ENST00000496910 TIMM21Q9BVV7 248 aa1.97□□□□□ -2.09
EXOSC3-208ENST00000496910 PRO1933Q9H354 126 aa1.97□□□□□ -2.09
EXOSC3-208ENST00000496910 NDUFA12Q9UI09 145 aa1.97□□□□□ -2.09
EXOSC3-208ENST00000496910 LINC00312Q9Y6C7 94 aa1.97□□□□□ -2.09
EXOSC3-208ENST00000496910 RBAKDNA6NC62 111 aa1.96□□□□□ -2.1
EXOSC3-208ENST00000496910 SNCGO76070 127 aa1.96□□□□□ -2.1
EXOSC3-208ENST00000496910 CXCL8P10145 99 aa1.96□□□□□ -2.1
EXOSC3-208ENST00000496910 RPL26P61254 145 aaKnown RBP1.96□□□□□ -2.1
EXOSC3-208ENST00000496910 PYY3Q5JQD4 70 aa1.96□□□□□ -2.1
EXOSC3-208ENST00000496910 S100A7L2Q5SY68 101 aa1.96□□□□□ -2.1
EXOSC3-208ENST00000496910 ZNF833PQ6ZTB9 187 aa1.96□□□□□ -2.1
EXOSC3-208ENST00000496910 LINC00167Q96N53 147 aa1.96□□□□□ -2.1
EXOSC3-208ENST00000496910 DPY30Q9C005 99 aa1.96□□□□□ -2.1
EXOSC3-208ENST00000496910 DPH3P1Q9H4G8 78 aa1.96□□□□□ -2.1
EXOSC3-208ENST00000496910 A0A1W2PNN7 141 aa1.95□□□□□ -2.1
EXOSC3-208ENST00000496910 FAM24AA6NFZ4 105 aa1.95□□□□□ -2.1
EXOSC3-208ENST00000496910 DEFB108AA8MXU0 73 aa1.95□□□□□ -2.1
EXOSC3-208ENST00000496910 LINC00315P59091 139 aa1.95□□□□□ -2.1
EXOSC3-208ENST00000496910 RBM3P98179 157 aaKnown RBP1.95□□□□□ -2.1
EXOSC3-208ENST00000496910 PDE6HQ13956 83 aa1.95□□□□□ -2.1
EXOSC3-208ENST00000496910 KRTAP13-3Q3SY46 172 aa1.95□□□□□ -2.1
EXOSC3-208ENST00000496910 SBSPONQ8IVN8 264 aa1.95□□□□□ -2.1
EXOSC3-208ENST00000496910 SPACA4Q8TDM5 124 aa1.95□□□□□ -2.1
EXOSC3-208ENST00000496910 VAMP8Q9BV40 100 aa1.95□□□□□ -2.1
EXOSC3-208ENST00000496910 NINQ8N4C6 2090 aa1.95□□□□□ -2.1
EXOSC3-208ENST00000496910 HEATR1Q9H583 2144 aaKnown RBP1.94□□□□□ -2.1
EXOSC3-208ENST00000496910 IGKV2-28A0A075B6P5 120 aa1.94□□□□□ -2.1
EXOSC3-208ENST00000496910 IGKV1D-17A0A075B6S4 117 aa1.94□□□□□ -2.1
EXOSC3-208ENST00000496910 CLPSL1A2RUU4 121 aa1.94□□□□□ -2.1
EXOSC3-208ENST00000496910 IGKV2D-28P01615 120 aa1.94□□□□□ -2.1
EXOSC3-208ENST00000496910 IGLC1P0CG04 106 aa1.94□□□□□ -2.1
EXOSC3-208ENST00000496910 PIPP12273 146 aaPredicted RBP1.94□□□□□ -2.1
EXOSC3-208ENST00000496910 LCE3AQ5TA76 89 aa1.94□□□□□ -2.1
EXOSC3-208ENST00000496910 SPANXN1Q5VSR9 72 aa1.94□□□□□ -2.1
EXOSC3-208ENST00000496910 LYPD1Q8N2G4 141 aa1.94□□□□□ -2.1
EXOSC3-208ENST00000496910 CMTM2Q8TAZ6 248 aa1.94□□□□□ -2.1
EXOSC3-208ENST00000496910 SNRNP200O75643 2136 aaKnown RBP1.94□□□□□ -2.1
EXOSC3-208ENST00000496910 TFF1P04155 84 aa1.93□□□□□ -2.1
EXOSC3-208ENST00000496910 COX7CP15954 63 aa1.93□□□□□ -2.1
EXOSC3-208ENST00000496910 SNCAP37840 140 aa1.93□□□□□ -2.1
EXOSC3-208ENST00000496910 KRTAP10-8P60410 259 aa1.93□□□□□ -2.1
EXOSC3-208ENST00000496910 UBE2G1P62253 170 aa1.93□□□□□ -2.1
EXOSC3-208ENST00000496910 CNBPP62633 177 aaKnown RBP1.93□□□□□ -2.1
EXOSC3-208ENST00000496910 SPRNQ5BIV9 151 aa1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms