RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.48□□□□□ -1.37
HPS4-217ENST00000496385 LAMTOR3Q9UHA4 124 aa6.48□□□□□ -1.37
HPS4-217ENST00000496385 NCR3O14931 201 aa6.47□□□□□ -1.37
HPS4-217ENST00000496385 BLCAPP62952 87 aa6.47□□□□□ -1.37
HPS4-217ENST00000496385 LINC00467Q9BRT7 94 aa6.47□□□□□ -1.37
HPS4-217ENST00000496385 SND1-IT1Q9HBX3 110 aa6.47□□□□□ -1.37
HPS4-217ENST00000496385 LECT2O14960 151 aa6.47□□□□□ -1.37
HPS4-217ENST00000496385 COX6A2Q02221 97 aa6.47□□□□□ -1.37
HPS4-217ENST00000496385 ENHOQ6UWT2 76 aa6.47□□□□□ -1.37
HPS4-217ENST00000496385 MIR7-3HGQ8N6C7 128 aa6.47□□□□□ -1.37
HPS4-217ENST00000496385 IGKV2-28A0A075B6P5 120 aa6.46□□□□□ -1.37
HPS4-217ENST00000496385 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.46□□□□□ -1.37
HPS4-217ENST00000496385 TRBV7-6A0A0J9YX20 115 aa6.46□□□□□ -1.37
HPS4-217ENST00000496385 A0A0U1RRA0 63 aa6.46□□□□□ -1.37
HPS4-217ENST00000496385 IGKV2-29A2NJV5 120 aaPredicted RBP6.46□□□□□ -1.37
HPS4-217ENST00000496385 IGKV2D-28P01615 120 aa6.46□□□□□ -1.37
HPS4-217ENST00000496385 FAM19A1Q7Z5A9 133 aa6.46□□□□□ -1.37
HPS4-217ENST00000496385 C5orf56Q8N8D9 126 aa6.46□□□□□ -1.37
HPS4-217ENST00000496385 ANK3Q12955 4377 aaKnown RBP6.46□□□□□ -1.37
HPS4-217ENST00000496385 IGHV3OR16-12A0A075B7B8 117 aa6.46□□□□□ -1.38
HPS4-217ENST00000496385 TMEM256-PLSCR3K7ERE1 68 aa6.46□□□□□ -1.38
HPS4-217ENST00000496385 SS18Q15532 418 aa6.46□□□□□ -1.38
HPS4-217ENST00000496385 BRD3OSQ6XYD6 125 aa6.46□□□□□ -1.38
HPS4-217ENST00000496385 BRK1Q8WUW1 75 aa6.46□□□□□ -1.38
HPS4-217ENST00000496385 IGHV4-38-2P0DP08 117 aa6.46□□□□□ -1.38
HPS4-217ENST00000496385 LINC00482Q8N8I6 264 aa6.45□□□□□ -1.38
HPS4-217ENST00000496385 RBM3P98179 157 aaKnown RBP6.45□□□□□ -1.38
HPS4-217ENST00000496385 SIRPDQ9H106 197 aa6.45□□□□□ -1.38
HPS4-217ENST00000496385 F8WEM9 126 aa6.44□□□□□ -1.38
HPS4-217ENST00000496385 IGHV3-53P01767 116 aa6.44□□□□□ -1.38
HPS4-217ENST00000496385 SNRPD3P62318 126 aaKnown RBP6.44□□□□□ -1.38
HPS4-217ENST00000496385 RPL36AP83881 106 aaKnown RBP6.44□□□□□ -1.38
HPS4-217ENST00000496385 RPL36ALQ969Q0 106 aaKnown RBP6.44□□□□□ -1.38
HPS4-217ENST00000496385 ERC2-IT1O76042 136 aa6.44□□□□□ -1.38
HPS4-217ENST00000496385 MOB4Q9Y3A3 225 aa6.43□□□□□ -1.38
HPS4-217ENST00000496385 EDN2P20800 178 aa6.42□□□□□ -1.38
HPS4-217ENST00000496385 C2CD3Q4AC94 2353 aa6.42□□□□□ -1.38
HPS4-217ENST00000496385 IGKV3-7A0A075B6H7 116 aa6.42□□□□□ -1.38
HPS4-217ENST00000496385 IBA57-AS1B1ANH7 110 aa6.42□□□□□ -1.38
HPS4-217ENST00000496385 CXCL6P80162 114 aa6.42□□□□□ -1.38
HPS4-217ENST00000496385 C1orf158Q8N1D5 194 aa6.42□□□□□ -1.38
HPS4-217ENST00000496385 WFDC9Q8NEX5 89 aa6.42□□□□□ -1.38
HPS4-217ENST00000496385 ATRQ13535 2644 aa6.42□□□□□ -1.38
HPS4-217ENST00000496385 A0A1W2PRX2 142 aa6.41□□□□□ -1.38
HPS4-217ENST00000496385 PROK1P58294 105 aa6.41□□□□□ -1.38
HPS4-217ENST00000496385 RMI2Q96E14 147 aa6.41□□□□□ -1.38
HPS4-217ENST00000496385 C6orf226Q5I0X4 101 aa6.4□□□□□ -1.38
HPS4-217ENST00000496385 FBN1P35555 2871 aaKnown RBP6.4□□□□□ -1.38
HPS4-217ENST00000496385 LOC110117498A0A087WWA1 95 aa6.4□□□□□ -1.38
HPS4-217ENST00000496385 IGHV3-73A0A0B4J1V6 119 aa6.4□□□□□ -1.38
HPS4-217ENST00000496385 TRBV6-4A0A1B0GX49 114 aa6.4□□□□□ -1.38
HPS4-217ENST00000496385 PDE6GP18545 87 aa6.4□□□□□ -1.38
HPS4-217ENST00000496385 CCL18P55774 89 aa6.4□□□□□ -1.38
HPS4-217ENST00000496385 SPINK13Q1W4C9 94 aa6.4□□□□□ -1.38
HPS4-217ENST00000496385 COX7B2Q8TF08 81 aa6.4□□□□□ -1.38
HPS4-217ENST00000496385 K7EQG2 157 aa6.4□□□□□ -1.39
HPS4-217ENST00000496385 MIFP14174 115 aa6.4□□□□□ -1.39
HPS4-217ENST00000496385 SAA4P35542 130 aa6.4□□□□□ -1.39
HPS4-217ENST00000496385 PRR15Q8IV56 129 aa6.4□□□□□ -1.39
HPS4-217ENST00000496385 Q8N814 137 aa6.4□□□□□ -1.39
HPS4-217ENST00000496385 LINC00474Q9P2X8 69 aa6.4□□□□□ -1.39
HPS4-217ENST00000496385 A0A0U1RQV1 116 aa6.39□□□□□ -1.39
HPS4-217ENST00000496385 CDC42SE2Q9NRR3 84 aa6.39□□□□□ -1.39
HPS4-217ENST00000496385 IGHV3-38A0A0C4DH36 116 aa6.39□□□□□ -1.39
HPS4-217ENST00000496385 TRBV7-4A0A0J9YYF1 115 aa6.39□□□□□ -1.39
HPS4-217ENST00000496385 H3BQ85 93 aa6.39□□□□□ -1.39
HPS4-217ENST00000496385 K7EQD1 137 aa6.39□□□□□ -1.39
HPS4-217ENST00000496385 SLPIP03973 132 aa6.39□□□□□ -1.39
HPS4-217ENST00000496385 LINC00158P58513 81 aa6.39□□□□□ -1.39
HPS4-217ENST00000496385 DEFB112Q30KQ8 113 aa6.39□□□□□ -1.39
HPS4-217ENST00000496385 SNURFQ9Y675 71 aa6.39□□□□□ -1.39
HPS4-217ENST00000496385 PLAC8L1A1L4L8 177 aa6.38□□□□□ -1.39
HPS4-217ENST00000496385 FSHBP01225 129 aa6.38□□□□□ -1.39
HPS4-217ENST00000496385 LINC01547P58512 204 aaPredicted RBP6.38□□□□□ -1.39
HPS4-217ENST00000496385 Q6ZSN1 163 aa6.38□□□□□ -1.39
HPS4-217ENST00000496385 C11orf72Q8NBR9 251 aa6.38□□□□□ -1.39
HPS4-217ENST00000496385 PMAIP1Q13794 54 aa6.38□□□□□ -1.39
HPS4-217ENST00000496385 Q6ZRU5 148 aa6.38□□□□□ -1.39
HPS4-217ENST00000496385 Q6ZQT0 140 aa6.37□□□□□ -1.39
HPS4-217ENST00000496385 A8MTW9 85 aa6.37□□□□□ -1.39
HPS4-217ENST00000496385 DYNLRB2Q8TF09 96 aa6.37□□□□□ -1.39
HPS4-217ENST00000496385 TRAV10A0A0B4J240 114 aa6.36□□□□□ -1.39
HPS4-217ENST00000496385 TRBV10-1A0A0K0K1A3 114 aa6.36□□□□□ -1.39
HPS4-217ENST00000496385 PAX4O43316 350 aa6.36□□□□□ -1.39
HPS4-217ENST00000496385 IGKV3-20P01619 116 aa6.36□□□□□ -1.39
HPS4-217ENST00000496385 ESM1Q9NQ30 184 aa6.36□□□□□ -1.39
HPS4-217ENST00000496385 IGHV4-59P01825 116 aa6.36□□□□□ -1.39
HPS4-217ENST00000496385 LY6EQ16553 131 aa6.36□□□□□ -1.39
HPS4-217ENST00000496385 ESRGQ1W209 222 aa6.36□□□□□ -1.39
HPS4-217ENST00000496385 KRTAP21-3Q3LHN1 58 aa6.36□□□□□ -1.39
HPS4-217ENST00000496385 Q9UF83 564 aa6.36□□□□□ -1.39
HPS4-217ENST00000496385 IGHV3-11P01762 117 aa6.35□□□□□ -1.39
HPS4-217ENST00000496385 COL6A5A8TX70 2615 aa6.35□□□□□ -1.39
HPS4-217ENST00000496385 IGLV1-40P01703 118 aa6.35□□□□□ -1.39
HPS4-217ENST00000496385 Q6ZVQ6 151 aa6.35□□□□□ -1.39
HPS4-217ENST00000496385 TENM1Q9UKZ4 2725 aa6.35□□□□□ -1.39
HPS4-217ENST00000496385 H3BUX3 64 aa6.35□□□□□ -1.39
HPS4-217ENST00000496385 C6orf223Q8N319 242 aa6.35□□□□□ -1.39
HPS4-217ENST00000496385 DNAJC9-AS1A6NH13 148 aa6.34□□□□□ -1.39
HPS4-217ENST00000496385 ZNF561-AS1K7EIQ3 104 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms