RNA–Protein interactions for RNA: ENST00000495640.1

COPS3-211, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 333 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-211ENST00000495640 PRO1933Q9H354 126 aa0.29□□□□□ -2.36
COPS3-211ENST00000495640 NCOR1O75376 2440 aa0.29□□□□□ -2.36
COPS3-211ENST00000495640 HRNRQ86YZ3 2850 aaPredicted RBP0.29□□□□□ -2.36
COPS3-211ENST00000495640 NCOR2Q9Y618 2525 aa0.29□□□□□ -2.36
COPS3-211ENST00000495640 PLEKHH2Q8IVE3 1493 aa0.29□□□□□ -2.36
COPS3-211ENST00000495640 MYH4Q9Y623 1939 aa0.28□□□□□ -2.36
COPS3-211ENST00000495640 KNDC1Q76NI1 1749 aa0.28□□□□□ -2.36
COPS3-211ENST00000495640 PMCHL1Q16048 86 aa0.28□□□□□ -2.36
COPS3-211ENST00000495640 FDCSPQ8NFU4 85 aa0.28□□□□□ -2.36
COPS3-211ENST00000495640 BSNQ9UPA5 3926 aa0.28□□□□□ -2.36
COPS3-211ENST00000495640 NLRP1Q9C000 1473 aa0.28□□□□□ -2.37
COPS3-211ENST00000495640 SHPRHQ149N8 1683 aa0.27□□□□□ -2.37
COPS3-211ENST00000495640 PSMG4Q5JS54 123 aa0.27□□□□□ -2.37
COPS3-211ENST00000495640 POLA1P09884 1462 aaPredicted RBP0.27□□□□□ -2.37
COPS3-211ENST00000495640 RAPGEF2Q9Y4G8 1499 aa0.27□□□□□ -2.37
COPS3-211ENST00000495640 TTC37Q6PGP7 1564 aa0.27□□□□□ -2.37
COPS3-211ENST00000495640 CLTCQ00610 1675 aaKnown RBP0.27□□□□□ -2.37
COPS3-211ENST00000495640 PPRC1Q5VV67 1664 aaKnown RBP0.27□□□□□ -2.37
COPS3-211ENST00000495640 FAT2Q9NYQ8 4349 aa0.27□□□□□ -2.37
COPS3-211ENST00000495640 SPINK1P00995 79 aa0.26□□□□□ -2.37
COPS3-211ENST00000495640 UQCRHP07919 91 aa0.26□□□□□ -2.37
COPS3-211ENST00000495640 FAUP35544 74 aaKnown RBP0.26□□□□□ -2.37
COPS3-211ENST00000495640 WFDC2Q14508 124 aa0.26□□□□□ -2.37
COPS3-211ENST00000495640 PIGYQ3MUY2 71 aa0.26□□□□□ -2.37
COPS3-211ENST00000495640 TARBP1Q13395 1621 aaKnown RBP0.26□□□□□ -2.37
COPS3-211ENST00000495640 A0A0G2JMZ2 1700 aa0.26□□□□□ -2.37
COPS3-211ENST00000495640 MON2Q7Z3U7 1717 aa0.26□□□□□ -2.37
COPS3-211ENST00000495640 WNK2Q9Y3S1 2297 aa0.25□□□□□ -2.37
COPS3-211ENST00000495640 MDN1Q9NU22 5596 aa0.25□□□□□ -2.37
COPS3-211ENST00000495640 TRBV7-4A0A0J9YYF1 115 aa0.25□□□□□ -2.37
COPS3-211ENST00000495640 Q5VSD8 79 aa0.25□□□□□ -2.37
COPS3-211ENST00000495640 HIVEP3Q5T1R4 2406 aa0.24□□□□□ -2.37
COPS3-211ENST00000495640 ARMS2P0C7Q2 107 aa0.24□□□□□ -2.37
COPS3-211ENST00000495640 PKD1L1Q8TDX9 2849 aa0.24□□□□□ -2.37
COPS3-211ENST00000495640 TSC2P49815 1807 aa0.24□□□□□ -2.37
COPS3-211ENST00000495640 RGPD4Q7Z3J3 1758 aa0.24□□□□□ -2.37
COPS3-211ENST00000495640 UBR1Q8IWV7 1749 aa0.24□□□□□ -2.37
COPS3-211ENST00000495640 TENM4Q6N022 2769 aa0.23□□□□□ -2.37
COPS3-211ENST00000495640 EPRSP07814 1512 aaKnown RBP0.23□□□□□ -2.37
COPS3-211ENST00000495640 FANCAO15360 1455 aa0.23□□□□□ -2.37
COPS3-211ENST00000495640 DEFB107AQ8IZN7 70 aa0.23□□□□□ -2.37
COPS3-211ENST00000495640 C20orf78Q9BR46 151 aa0.23□□□□□ -2.37
COPS3-211ENST00000495640 HIGD1BQ9P298 99 aa0.23□□□□□ -2.37
COPS3-211ENST00000495640 U3KQA8 63 aa0.23□□□□□ -2.37
COPS3-211ENST00000495640 MUC5ACP98088 5654 aa0.23□□□□□ -2.37
COPS3-211ENST00000495640 KIAA1551Q9HCM1 1747 aa0.23□□□□□ -2.37
COPS3-211ENST00000495640 ABCC2Q92887 1545 aa0.23□□□□□ -2.37
COPS3-211ENST00000495640 HUWE1Q7Z6Z7 4374 aaKnown RBP0.22□□□□□ -2.37
COPS3-211ENST00000495640 ABCA2Q9BZC7 2435 aa0.22□□□□□ -2.37
COPS3-211ENST00000495640 UQCRHLA0A096LP55 91 aa0.22□□□□□ -2.37
COPS3-211ENST00000495640 SPRR1AP35321 89 aa0.22□□□□□ -2.37
COPS3-211ENST00000495640 PSENENQ9NZ42 101 aa0.22□□□□□ -2.37
COPS3-211ENST00000495640 KIAA0556O60303 1618 aa0.22□□□□□ -2.37
COPS3-211ENST00000495640 SMARCA2P51531 1590 aa0.22□□□□□ -2.37
COPS3-211ENST00000495640 ATRQ13535 2644 aa0.21□□□□□ -2.38
COPS3-211ENST00000495640 FXYD6-FXYD2A0A087WZ82 144 aa0.21□□□□□ -2.38
COPS3-211ENST00000495640 F8WEM9 126 aa0.21□□□□□ -2.38
COPS3-211ENST00000495640 H0Y9P7 68 aa0.21□□□□□ -2.38
COPS3-211ENST00000495640 H3BQF6 201 aa0.21□□□□□ -2.38
COPS3-211ENST00000495640 K7EQZ3 153 aa0.21□□□□□ -2.38
COPS3-211ENST00000495640 SLIT1O75093 1534 aa0.21□□□□□ -2.38
COPS3-211ENST00000495640 RGPD3A6NKT7 1758 aaPredicted RBP0.21□□□□□ -2.38
COPS3-211ENST00000495640 ATP10BO94823 1461 aa0.21□□□□□ -2.38
COPS3-211ENST00000495640 CRYBG1Q9Y4K1 1723 aa0.21□□□□□ -2.38
COPS3-211ENST00000495640 C5P01031 1676 aa0.21□□□□□ -2.38
COPS3-211ENST00000495640 CSPG4Q6UVK1 2322 aa0.2□□□□□ -2.38
COPS3-211ENST00000495640 SETBP1Q9Y6X0 1596 aa0.2□□□□□ -2.38
COPS3-211ENST00000495640 A0A1B0GU69 56 aa0.2□□□□□ -2.38
COPS3-211ENST00000495640 CFDP00746 253 aaPredicted RBP0.2□□□□□ -2.38
COPS3-211ENST00000495640 GYPAP02724 150 aa0.2□□□□□ -2.38
COPS3-211ENST00000495640 C6orf201Q7Z4U5 140 aa0.2□□□□□ -2.38
COPS3-211ENST00000495640 DMBT1Q9UGM3 2413 aaPredicted RBP0.2□□□□□ -2.38
COPS3-211ENST00000495640 KMT2AQ03164 3969 aa0.2□□□□□ -2.38
COPS3-211ENST00000495640 IQSEC2Q5JU85 1478 aa0.2□□□□□ -2.38
COPS3-211ENST00000495640 CEP162Q5TB80 1403 aa0.2□□□□□ -2.38
COPS3-211ENST00000495640 BAZ1AQ9NRL2 1556 aaPredicted RBP0.19□□□□□ -2.38
COPS3-211ENST00000495640 COX6B1P14854 86 aa0.19□□□□□ -2.38
COPS3-211ENST00000495640 SPRR1BP22528 89 aa0.19□□□□□ -2.38
COPS3-211ENST00000495640 HMGN3Q15651 99 aa0.19□□□□□ -2.38
COPS3-211ENST00000495640 ETDBQ3ZM63 59 aa0.19□□□□□ -2.38
COPS3-211ENST00000495640 MYO3AQ8NEV4 1616 aa0.19□□□□□ -2.38
COPS3-211ENST00000495640 EDC4Q6P2E9 1401 aaKnown RBP0.19□□□□□ -2.38
COPS3-211ENST00000495640 FMN2Q9NZ56 1722 aa0.18□□□□□ -2.38
COPS3-211ENST00000495640 SPTA1P02549 2419 aa0.18□□□□□ -2.38
COPS3-211ENST00000495640 CUX1P39880 1505 aa0.18□□□□□ -2.38
COPS3-211ENST00000495640 DEFB109BQ30KR1 87 aa0.18□□□□□ -2.38
COPS3-211ENST00000495640 V9GYS6 101 aa0.18□□□□□ -2.38
COPS3-211ENST00000495640 REV3LO60673 3130 aa0.18□□□□□ -2.38
COPS3-211ENST00000495640 COL7A1Q02388 2944 aa0.17□□□□□ -2.38
COPS3-211ENST00000495640 KMT2DO14686 5537 aa0.17□□□□□ -2.38
COPS3-211ENST00000495640 PTPN13Q12923 2485 aa0.17□□□□□ -2.38
COPS3-211ENST00000495640 SAMD9Q5K651 1589 aa0.17□□□□□ -2.38
COPS3-211ENST00000495640 ZNF720Q7Z2F6 126 aa0.17□□□□□ -2.38
COPS3-211ENST00000495640 CACNA1AO00555 2505 aa0.17□□□□□ -2.38
COPS3-211ENST00000495640 PYY3Q5JQD4 70 aa0.16□□□□□ -2.38
COPS3-211ENST00000495640 Q9H521 79 aa0.16□□□□□ -2.38
COPS3-211ENST00000495640 PRKDCP78527 4128 aaKnown RBP0.16□□□□□ -2.38
COPS3-211ENST00000495640 TNXBP22105 4242 aa0.15□□□□□ -2.38
COPS3-211ENST00000495640 PPLO60437 1756 aa0.15□□□□□ -2.39
COPS3-211ENST00000495640 ABCC3O15438 1527 aa0.15□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms