RNA–Protein interactions for RNA: ENST00000495426.1

BBS9-213, Transcript of Bardet-Biedl syndrome 9, human

TSL 3

Gene BBS9, Length 481 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS9-213	ENST00000495426	ADAMTSL4-AS1	Q5T5F5	129 aa		4.18	□□□□□ -1.74
BBS9-213	ENST00000495426	NOTCH2NL	Q7Z3S9	236 aa		4.18	□□□□□ -1.74
BBS9-213	ENST00000495426	AMN1	Q8IY45	258 aa		4.18	□□□□□ -1.74
BBS9-213	ENST00000495426	BORCS7	Q96B45	105 aa		4.18	□□□□□ -1.74
BBS9-213	ENST00000495426	KIR2DL4	Q99706	377 aa		4.18	□□□□□ -1.74
BBS9-213	ENST00000495426	TIMM21	Q9BVV7	248 aa		4.18	□□□□□ -1.74
BBS9-213	ENST00000495426	TMEM191A	Q9H0A3	160 aa		4.18	□□□□□ -1.74
BBS9-213	ENST00000495426	TGIF2-C20orf24	A0A0A6YYL0	155 aa		4.17	□□□□□ -1.74
BBS9-213	ENST00000495426	TRBV30	A0A0K0K1B3	111 aa		4.17	□□□□□ -1.74
BBS9-213	ENST00000495426	NDUFC2-KCTD14	E9PQ53	114 aa		4.17	□□□□□ -1.74
BBS9-213	ENST00000495426	RAB4A	P20338	218 aa		4.17	□□□□□ -1.74
BBS9-213	ENST00000495426	RPL39	P62891	51 aa	Known RBP	4.17	□□□□□ -1.74
BBS9-213	ENST00000495426	ALKBH7	Q9BT30	221 aa	Predicted RBP	4.17	□□□□□ -1.74
BBS9-213	ENST00000495426	IGLV7-46	A0A075B6I9	117 aa		4.16	□□□□□ -1.74
BBS9-213	ENST00000495426		A0A1B0GUT8	65 aa		4.16	□□□□□ -1.74
BBS9-213	ENST00000495426	HIGD1C	A8MV81	97 aa		4.16	□□□□□ -1.74
BBS9-213	ENST00000495426	RPL28	P46779	137 aa	Known RBP	4.16	□□□□□ -1.74
BBS9-213	ENST00000495426	KIAA0087	Q14695	138 aa		4.16	□□□□□ -1.74
BBS9-213	ENST00000495426	C2orf82	Q6UX34	121 aa		4.16	□□□□□ -1.74
BBS9-213	ENST00000495426	FAM231D	Q6ZW35	169 aa		4.16	□□□□□ -1.74
BBS9-213	ENST00000495426	LINC00304	Q8N9R0	145 aa		4.16	□□□□□ -1.74
BBS9-213	ENST00000495426	PACRG	Q96M98	296 aa	Predicted RBP	4.16	□□□□□ -1.74
BBS9-213	ENST00000495426	HMSD	A8MTL9	139 aa		4.15	□□□□□ -1.75
BBS9-213	ENST00000495426	PPP1R2P9	O14990	202 aa		4.15	□□□□□ -1.75
BBS9-213	ENST00000495426	PPP1R17	O96001	155 aa		4.15	□□□□□ -1.75
BBS9-213	ENST00000495426	HBB	P68871	147 aa		4.15	□□□□□ -1.75
BBS9-213	ENST00000495426	KRTAP13-2	Q52LG2	175 aa		4.15	□□□□□ -1.75
BBS9-213	ENST00000495426	LINC00173	Q6ZV60	143 aa		4.15	□□□□□ -1.75
BBS9-213	ENST00000495426	FAM104A	Q969W3	186 aa		4.15	□□□□□ -1.75
BBS9-213	ENST00000495426	ANAPC11	Q9NYG5	84 aa		4.15	□□□□□ -1.75
BBS9-213	ENST00000495426	BCE1	O60756	84 aa		4.14	□□□□□ -1.75
BBS9-213	ENST00000495426	MT3	P25713	68 aa		4.14	□□□□□ -1.75
BBS9-213	ENST00000495426	TAGLN2	P37802	199 aa	Known RBP	4.14	□□□□□ -1.75
BBS9-213	ENST00000495426	MRPS36	P82909	103 aa	Known RBP	4.14	□□□□□ -1.75
BBS9-213	ENST00000495426	LINC00469	Q8N7U9	141 aa		4.14	□□□□□ -1.75
BBS9-213	ENST00000495426	SPANXA1	Q9NS26	97 aa		4.14	□□□□□ -1.75
BBS9-213	ENST00000495426	C22orf24	Q9Y442	160 aa		4.14	□□□□□ -1.75
BBS9-213	ENST00000495426	LINC00242	Q5T6M2	205 aa		4.13	□□□□□ -1.75
BBS9-213	ENST00000495426	XAGE1A	Q9HD64	81 aa		4.13	□□□□□ -1.75
BBS9-213	ENST00000495426	ZNF727	A8MUV8	499 aa		4.12	□□□□□ -1.75
BBS9-213	ENST00000495426	TCAP	O15273	167 aa		4.12	□□□□□ -1.75
BBS9-213	ENST00000495426	RIG	Q13278	110 aa		4.12	□□□□□ -1.75
BBS9-213	ENST00000495426	MRPL55	Q7Z7F7	128 aa	Known RBP	4.12	□□□□□ -1.75
BBS9-213	ENST00000495426	SMIM2	Q9BVW6	85 aa		4.12	□□□□□ -1.75
BBS9-213	ENST00000495426	PPDPF	Q9H3Y8	114 aa		4.12	□□□□□ -1.75
BBS9-213	ENST00000495426	TP73-AS1	Q9UF72	201 aa		4.12	□□□□□ -1.75
BBS9-213	ENST00000495426	TMEM250	H0YL14	139 aa		4.11	□□□□□ -1.75
BBS9-213	ENST00000495426	CEBPG	P53567	150 aa		4.11	□□□□□ -1.75
BBS9-213	ENST00000495426	RPL32	P62910	135 aa	Known RBP	4.11	□□□□□ -1.75
BBS9-213	ENST00000495426	FAM229B	Q4G0N7	80 aa		4.11	□□□□□ -1.75
BBS9-213	ENST00000495426	MRPL51	Q4U2R6	128 aa	Known RBP	4.11	□□□□□ -1.75
BBS9-213	ENST00000495426	C20orf78	Q9BR46	151 aa		4.11	□□□□□ -1.75
BBS9-213	ENST00000495426	TOMM7	Q9P0U1	55 aa		4.11	□□□□□ -1.75
BBS9-213	ENST00000495426	IGLV4-3	A0A075B6K6	122 aa		4.1	□□□□□ -1.75
BBS9-213	ENST00000495426	IGKV2D-26	A0A0A0MRZ7	120 aa		4.1	□□□□□ -1.75
BBS9-213	ENST00000495426	RPL37AP8	A6NKH3	93 aa		4.1	□□□□□ -1.75
BBS9-213	ENST00000495426	CKS2	P33552	79 aa		4.1	□□□□□ -1.75
BBS9-213	ENST00000495426	IFI27	P40305	119 aa	Predicted RBP	4.1	□□□□□ -1.75
BBS9-213	ENST00000495426	UBE2A	P49459	152 aa		4.1	□□□□□ -1.75
BBS9-213	ENST00000495426	CKS1B	P61024	79 aa		4.1	□□□□□ -1.75
BBS9-213	ENST00000495426	RGS21	Q2M5E4	152 aa		4.1	□□□□□ -1.75
BBS9-213	ENST00000495426	FAM104B	Q5XKR9	115 aa		4.1	□□□□□ -1.75
BBS9-213	ENST00000495426	LINC01551	Q86U37	167 aa		4.1	□□□□□ -1.75
BBS9-213	ENST00000495426	KRTAP13-1	Q8IUC0	172 aa		4.1	□□□□□ -1.75
BBS9-213	ENST00000495426	FAM218A	Q96MZ4	157 aa		4.1	□□□□□ -1.75
BBS9-213	ENST00000495426	SMIM7	Q9BQ49	75 aa		4.1	□□□□□ -1.75
BBS9-213	ENST00000495426	OSTC	Q9NRP0	149 aa		4.1	□□□□□ -1.75
BBS9-213	ENST00000495426	TRBV24-1	A0A075B6N3	115 aa		4.09	□□□□□ -1.75
BBS9-213	ENST00000495426	LINC00862	A6NCI5	91 aa		4.09	□□□□□ -1.75
BBS9-213	ENST00000495426		D6R8Y8	96 aa		4.09	□□□□□ -1.75
BBS9-213	ENST00000495426	NPY	P01303	97 aa		4.09	□□□□□ -1.75
BBS9-213	ENST00000495426	ASB16-AS1	Q495Z4	193 aa		4.09	□□□□□ -1.75
BBS9-213	ENST00000495426	LINC01561	Q8N1V8	128 aa		4.09	□□□□□ -1.75
BBS9-213	ENST00000495426	TMEM141	Q96I45	108 aa		4.09	□□□□□ -1.75
BBS9-213	ENST00000495426	LINC00167	Q96N53	147 aa		4.09	□□□□□ -1.75
BBS9-213	ENST00000495426	KRTAP4-1	Q9BYQ7	146 aa		4.09	□□□□□ -1.75
BBS9-213	ENST00000495426		V9GYV3	84 aa		4.09	□□□□□ -1.75
BBS9-213	ENST00000495426	CTAG1A	P78358	180 aa		4.08	□□□□□ -1.76
BBS9-213	ENST00000495426		Q6ZN92	141 aa		4.08	□□□□□ -1.76
BBS9-213	ENST00000495426	TEX43	Q6ZNM6	134 aa		4.08	□□□□□ -1.76
BBS9-213	ENST00000495426		Q8IZM0	81 aa		4.08	□□□□□ -1.76
BBS9-213	ENST00000495426	C2orf88	Q9BSF0	95 aa		4.08	□□□□□ -1.76
BBS9-213	ENST00000495426		F8VRH5	84 aa		4.07	□□□□□ -1.76
BBS9-213	ENST00000495426	PRLH	P81277	87 aa		4.07	□□□□□ -1.76
BBS9-213	ENST00000495426	KRTAP13-3	Q3SY46	172 aa		4.07	□□□□□ -1.76
BBS9-213	ENST00000495426	C6orf226	Q5I0X4	101 aa		4.07	□□□□□ -1.76
BBS9-213	ENST00000495426	ZC2HC1B	Q5TFG8	222 aa		4.07	□□□□□ -1.76
BBS9-213	ENST00000495426	FP248	Q71RG6	208 aa	Predicted RBP	4.07	□□□□□ -1.76
BBS9-213	ENST00000495426	C3orf22	Q8N5N4	141 aa		4.07	□□□□□ -1.76
BBS9-213	ENST00000495426	LINC00337	Q8N6G1	96 aa		4.07	□□□□□ -1.76
BBS9-213	ENST00000495426	EIF5A2	Q9GZV4	153 aa	Known RBP	4.07	□□□□□ -1.76
BBS9-213	ENST00000495426	NAT8B	Q9UHF3	227 aa		4.07	□□□□□ -1.76
BBS9-213	ENST00000495426	RAB5A	P20339	215 aa		4.06	□□□□□ -1.76
BBS9-213	ENST00000495426	FAM74A3	Q4VXF1	159 aa		4.06	□□□□□ -1.76
BBS9-213	ENST00000495426	SLC51B	Q86UW2	128 aa		4.06	□□□□□ -1.76
BBS9-213	ENST00000495426	NKAPP1	Q8N9T2	125 aa		4.06	□□□□□ -1.76
BBS9-213	ENST00000495426	IGKV2-28	A0A075B6P5	120 aa		4.05	□□□□□ -1.76
BBS9-213	ENST00000495426		A0A1B0GW15	77 aa		4.05	□□□□□ -1.76
BBS9-213	ENST00000495426	IGKV2D-28	P01615	120 aa		4.05	□□□□□ -1.76
BBS9-213	ENST00000495426	CXCL5	P42830	114 aa		4.05	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms