RNA–Protein interactions for RNA: ENST00000495288.5

PSMB4-206, Transcript of proteasome subunit beta 4, humanhuman

TSL 2

Gene PSMB4, Length 986 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB4-206ENST00000495288 LINC00587B1AMM8 73 aa11.59□□□□□ -0.55
PSMB4-206ENST00000495288 SRSF9Q13242 221 aaKnown RBP eCLIP11.59□□□□□ -0.55
PSMB4-206ENST00000495288 CIRBPQ14011 172 aaKnown RBP11.59□□□□□ -0.55
PSMB4-206ENST00000495288 CXCL5P42830 114 aa11.58□□□□□ -0.56
PSMB4-206ENST00000495288 SFTA2Q6UW10 78 aa11.58□□□□□ -0.56
PSMB4-206ENST00000495288 UNQ6190/PRO20217Q6UXQ8 127 aa11.58□□□□□ -0.56
PSMB4-206ENST00000495288 Q6ZR54 194 aa11.58□□□□□ -0.56
PSMB4-206ENST00000495288 NTN5Q8WTR8 489 aaPredicted RBP11.58□□□□□ -0.56
PSMB4-206ENST00000495288 HIST1H4GQ99525 98 aa11.58□□□□□ -0.56
PSMB4-206ENST00000495288 VPS13DQ5THJ4 4388 aa11.56□□□□□ -0.56
PSMB4-206ENST00000495288 GVQW2A0A096LPI5 108 aaPredicted RBP11.56□□□□□ -0.56
PSMB4-206ENST00000495288 TMEM238C9JI98 176 aa11.56□□□□□ -0.56
PSMB4-206ENST00000495288 SMIM13P0DJ93 91 aa11.56□□□□□ -0.56
PSMB4-206ENST00000495288 LINC00158P58513 81 aa11.56□□□□□ -0.56
PSMB4-206ENST00000495288 C10orf25Q5T742 122 aa11.56□□□□□ -0.56
PSMB4-206ENST00000495288 CAMK2N2Q96S95 79 aa11.56□□□□□ -0.56
PSMB4-206ENST00000495288 TIMM17BO60830 172 aa11.55□□□□□ -0.56
PSMB4-206ENST00000495288 PFN2P35080 140 aa11.55□□□□□ -0.56
PSMB4-206ENST00000495288 HINT1P49773 126 aaPredicted RBP11.55□□□□□ -0.56
PSMB4-206ENST00000495288 HSD52Q0P140 79 aa11.55□□□□□ -0.56
PSMB4-206ENST00000495288 ADAMTSL4-AS1Q5T5F5 129 aa11.55□□□□□ -0.56
PSMB4-206ENST00000495288 C2orf48Q96LS8 159 aa11.55□□□□□ -0.56
PSMB4-206ENST00000495288 BATFQ16520 125 aa11.54□□□□□ -0.56
PSMB4-206ENST00000495288 ERG28Q9UKR5 140 aa11.54□□□□□ -0.56
PSMB4-206ENST00000495288 GCSHP23434 173 aa11.53□□□□□ -0.56
PSMB4-206ENST00000495288 WFDC2Q14508 124 aa11.53□□□□□ -0.56
PSMB4-206ENST00000495288 C1orf134Q5TEV5 83 aa11.53□□□□□ -0.56
PSMB4-206ENST00000495288 SPANXB1Q9NS25 103 aaPredicted RBP11.53□□□□□ -0.56
PSMB4-206ENST00000495288 DNAH1Q9P2D7 4330 aa11.52□□□□□ -0.56
PSMB4-206ENST00000495288 SYCNQ0VAF6 134 aa11.52□□□□□ -0.57
PSMB4-206ENST00000495288 TAL2Q16559 108 aa11.52□□□□□ -0.57
PSMB4-206ENST00000495288 C9orf116Q5BN46 136 aaPredicted RBP11.52□□□□□ -0.57
PSMB4-206ENST00000495288 Q6ZRN7 208 aaPredicted RBP11.52□□□□□ -0.57
PSMB4-206ENST00000495288 DAND5Q8N907 189 aa11.52□□□□□ -0.57
PSMB4-206ENST00000495288 LITAFQ99732 161 aa11.52□□□□□ -0.57
PSMB4-206ENST00000495288 F8WDY8 70 aa11.51□□□□□ -0.57
PSMB4-206ENST00000495288 NPC2P61916 151 aa11.51□□□□□ -0.57
PSMB4-206ENST00000495288 Q6ZRU5 148 aa11.51□□□□□ -0.57
PSMB4-206ENST00000495288 M0R143 59 aa11.5□□□□□ -0.57
PSMB4-206ENST00000495288 MUSTN1Q8IVN3 82 aa11.5□□□□□ -0.57
PSMB4-206ENST00000495288 CEND1Q8N111 149 aa11.5□□□□□ -0.57
PSMB4-206ENST00000495288 SPANXDQ9BXN6 97 aa11.5□□□□□ -0.57
PSMB4-206ENST00000495288 SPANXCQ9NY87 97 aa11.5□□□□□ -0.57
PSMB4-206ENST00000495288 C6orf48Q9UBA6 75 aa11.5□□□□□ -0.57
PSMB4-206ENST00000495288 PTTG1IPP53801 180 aa11.49□□□□□ -0.57
PSMB4-206ENST00000495288 C14orf177Q52M58 125 aa11.49□□□□□ -0.57
PSMB4-206ENST00000495288 BVES-AS1Q5T3Y7 98 aa11.49□□□□□ -0.57
PSMB4-206ENST00000495288 MIR7-3HGQ8N6C7 128 aa11.49□□□□□ -0.57
PSMB4-206ENST00000495288 ALMS1Q8TCU4 4167 aa11.47□□□□□ -0.57
PSMB4-206ENST00000495288 TRBV30A0A0K0K1B3 111 aa11.47□□□□□ -0.57
PSMB4-206ENST00000495288 LRCOL1A6NCL2 159 aa11.47□□□□□ -0.57
PSMB4-206ENST00000495288 SLPIP03973 132 aa11.47□□□□□ -0.57
PSMB4-206ENST00000495288 Q6ZVH6 145 aa11.47□□□□□ -0.57
PSMB4-206ENST00000495288 CARD19Q96LW7 228 aa11.47□□□□□ -0.57
PSMB4-206ENST00000495288 COX17Q14061 63 aa11.46□□□□□ -0.57
PSMB4-206ENST00000495288 LINC00308Q8TCZ7 52 aa11.46□□□□□ -0.57
PSMB4-206ENST00000495288 SNHG12Q9BXW3 62 aa11.46□□□□□ -0.57
PSMB4-206ENST00000495288 LYSTQ99698 3801 aa11.46□□□□□ -0.58
PSMB4-206ENST00000495288 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.45□□□□□ -0.58
PSMB4-206ENST00000495288 LCE6AA0A183 80 aa11.45□□□□□ -0.58
PSMB4-206ENST00000495288 EREGO14944 169 aa11.45□□□□□ -0.58
PSMB4-206ENST00000495288 IFITM1P13164 125 aa11.45□□□□□ -0.58
PSMB4-206ENST00000495288 FXYD2P54710 66 aa11.45□□□□□ -0.58
PSMB4-206ENST00000495288 A0A087WTM6 91 aa11.43□□□□□ -0.58
PSMB4-206ENST00000495288 RPL24P83731 157 aaKnown RBP11.43□□□□□ -0.58
PSMB4-206ENST00000495288 COPS9Q8WXC6 57 aa11.43□□□□□ -0.58
PSMB4-206ENST00000495288 EIF4EBP3O60516 100 aaPredicted RBP11.42□□□□□ -0.58
PSMB4-206ENST00000495288 RNF151Q2KHN1 245 aa11.42□□□□□ -0.58
PSMB4-206ENST00000495288 SOSTDC1Q6X4U4 206 aa11.42□□□□□ -0.58
PSMB4-206ENST00000495288 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.41□□□□□ -0.58
PSMB4-206ENST00000495288 A4D1N5 150 aa11.41□□□□□ -0.58
PSMB4-206ENST00000495288 SND1-IT1Q9HBX3 110 aa11.41□□□□□ -0.58
PSMB4-206ENST00000495288 TMEM238LA0A1B0GVL6 79 aa11.4□□□□□ -0.58
PSMB4-206ENST00000495288 A6NJY4 79 aa11.4□□□□□ -0.58
PSMB4-206ENST00000495288 Q8N814 137 aa11.4□□□□□ -0.58
PSMB4-206ENST00000495288 NHP2Q9NX24 153 aaKnown RBP11.4□□□□□ -0.58
PSMB4-206ENST00000495288 A6NDN8 102 aa11.39□□□□□ -0.59
PSMB4-206ENST00000495288 NDUFC2-KCTD14E9PQ53 114 aa11.39□□□□□ -0.59
PSMB4-206ENST00000495288 GAGE2EQ4V326 116 aa11.39□□□□□ -0.59
PSMB4-206ENST00000495288 GAGE2DQ9UEU5 116 aa11.39□□□□□ -0.59
PSMB4-206ENST00000495288 CNBPP62633 177 aaKnown RBP11.38□□□□□ -0.59
PSMB4-206ENST00000495288 RPL18AQ02543 176 aaKnown RBP11.38□□□□□ -0.59
PSMB4-206ENST00000495288 XAGE1AQ9HD64 81 aa11.38□□□□□ -0.59
PSMB4-206ENST00000495288 K7ERJ3 54 aa11.36□□□□□ -0.59
PSMB4-206ENST00000495288 RTL8CO15255 209 aa11.36□□□□□ -0.59
PSMB4-206ENST00000495288 TNP2Q05952 138 aa11.36□□□□□ -0.59
PSMB4-206ENST00000495288 COL5A1-AS1Q5SY13 56 aa11.36□□□□□ -0.59
PSMB4-206ENST00000495288 LOC107984640A0A0U1RRK4 108 aa11.35□□□□□ -0.59
PSMB4-206ENST00000495288 GAGE2BQ13066 116 aa11.35□□□□□ -0.59
PSMB4-206ENST00000495288 Q6ZRP5 223 aa11.35□□□□□ -0.59
PSMB4-206ENST00000495288 RAB37Q96AX2 223 aa11.35□□□□□ -0.59
PSMB4-206ENST00000495288 DNAH6Q9C0G6 4158 aa11.35□□□□□ -0.59
PSMB4-206ENST00000495288 CFC1BP0CG36 223 aa11.34□□□□□ -0.59
PSMB4-206ENST00000495288 CFC1P0CG37 223 aa11.34□□□□□ -0.59
PSMB4-206ENST00000495288 TLX1NBP0CAT3 122 aa11.33□□□□□ -0.6
PSMB4-206ENST00000495288 PPDPFQ9H3Y8 114 aa11.33□□□□□ -0.6
PSMB4-206ENST00000495288 LOC107984156A0A0G2JMH3 177 aa11.32□□□□□ -0.6
PSMB4-206ENST00000495288 FUSP35637 526 aaKnown RBP eCLIP11.32□□□□□ -0.6
PSMB4-206ENST00000495288 ARL17AQ8IVW1 177 aa11.32□□□□□ -0.6
PSMB4-206ENST00000495288 PRR3P79522 188 aaKnown RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms